RNA–Protein interactions for RNA: ENST00000583837.5

BRIP1-205, Transcript of BRCA1 interacting protein C-terminal helicase 1, human

TSL 5

Gene BRIP1, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRIP1-205	ENST00000583837	SNX16	P57768	344 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	RBM10	P98175	930 aa	Known RBP	10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	PTP4A2	Q12974	167 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	PDCL	Q13371	301 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	DUSP6	Q16828	381 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	PTPN20	Q4JDL3	420 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	CYP4A22	Q5TCH4	519 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	OR6B2	Q6IFH4	312 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	SLC8B1	Q6J4K2	584 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	LLGL2	Q6P1M3	1020 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	ZNF662	Q6ZS27	426 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	TRIM67	Q6ZTA4	783 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	PIGZ	Q86VD9	579 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	GPR65	Q8IYL9	337 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	ATAD1	Q8NBU5	361 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	IPO4	Q8TEX9	1081 aa	Known RBP	10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	STK32A	Q8WU08	396 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	TRIM11	Q96F44	468 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	HSFY1	Q96LI6	401 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	SLC4A5	Q9BY07	1137 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	TSGA10	Q9BZW7	698 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	S1PR5	Q9H228	398 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	LRRC4	Q9HBW1	653 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	RXFP1	Q9HBX9	757 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	ENTPD7	Q9NQZ7	604 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	CTTNBP2NL	Q9P2B4	639 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	TJP2	Q9UDY2	1190 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	CHORDC1	Q9UHD1	332 aa	Predicted RBP	10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	LZTS1	Q9Y250	596 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	SLC27A5	Q9Y2P5	690 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	USP15	Q9Y4E8	981 aa	Predicted RBP	10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	MYO10	Q9HD67	2058 aa		10.84	□□□□□ -0.67
BRIP1-205	ENST00000583837	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	MACROD2	A1Z1Q3	448 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	WDR27	A2RRH5	827 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	MTMR11	A4FU01	709 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837		E5RJQ4	531 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	GABBR2	O75899	941 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	MOCS3	O95396	460 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	CYP1A2	P05177	515 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	HAPLN1	P10915	354 aa	Predicted RBP	10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	RRM1	P23921	792 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	PLA2G4A	P47712	749 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	GABRB2	P47870	512 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	ZXDA	P98168	799 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	ROR1	Q01973	937 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	CREM	Q03060	361 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	ADCY1	Q08828	1119 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	SMARCB1	Q12824	385 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	DUSP4	Q13115	394 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	RAB33A	Q14088	237 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	ZNF268	Q14587	947 aa	Predicted RBP	10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	SMC1A	Q14683	1233 aa	Known RBP	10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	PTPN14	Q15678	1187 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	PLPP4	Q5VZY2	271 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	RBM23	Q86U06	439 aa	Known RBP	10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	SCUBE3	Q8IX30	993 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	ZMIZ2	Q8NF64	920 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	PRSS33	Q8NF86	280 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	SLC35G2	Q8TBE7	412 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	SPPL2B	Q8TCT7	592 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	C2orf15	Q8WU43	125 aa	Known RBP	10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	KCTD13	Q8WZ19	329 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	FUBP3	Q96I24	572 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	KLHL5	Q96PQ7	755 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	CDCA3	Q99618	268 aa	Predicted RBP	10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	TCF25	Q9BQ70	676 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	NUP85	Q9BW27	656 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	PHF7	Q9BWX1	381 aa	Predicted RBP	10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	UBXN6	Q9BZV1	441 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	MIS12	Q9H081	205 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	DMAP1	Q9NPF5	467 aa	Predicted RBP	10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	CYLD	Q9NQC7	956 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	TLR9	Q9NR96	1032 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	TMEM30A	Q9NV96	361 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	FNIP2	Q9P278	1114 aa		10.83	□□□□□ -0.68
BRIP1-205	ENST00000583837	BTNL10	A8MVZ5	291 aa		10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837	HHLA1	C9JL84	531 aa		10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837		F8VP50	259 aa		10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837	PER2	O15055	1255 aa		10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837	TEX28	O15482	410 aa		10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837	SOAT2	O75908	522 aa		10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837	ABLIM3	O94929	683 aa		10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837	GJB6	O95452	261 aa		10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837	VNN2	O95498	520 aa		10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837	CNP	P09543	421 aa	Known RBP	10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837	KLRC2	P26717	231 aa		10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837	ELF1	P32519	619 aa		10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837	MAGEA11	P43364	429 aa		10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837	GPR15	P49685	360 aa		10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837	IFI16	Q16666	785 aa	Known RBP	10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837	DDR2	Q16832	855 aa		10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837	MGAT5B	Q3V5L5	792 aa		10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837	CFAP221	Q4G0U5	840 aa		10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837	IER5L	Q5T953	404 aa		10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837	SDHAF4	Q5VUM1	108 aa		10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837	TPGS2	Q68CL5	300 aa		10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837	PLEKHA7	Q6IQ23	1121 aa		10.82	□□□□□ -0.68
BRIP1-205	ENST00000583837	PDE12	Q6L8Q7	609 aa	Known RBP	10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms