RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 COQ8BQ96D53 544 aa5.01□□□□□ -1.61
SMCHD1-208ENST00000583344 LRGUKQ96M69 825 aa5.01□□□□□ -1.61
SMCHD1-208ENST00000583344 FYTTD1Q96QD9 318 aaKnown RBP5.01□□□□□ -1.61
SMCHD1-208ENST00000583344 ANP32EQ9BTT0 268 aa5.01□□□□□ -1.61
SMCHD1-208ENST00000583344 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.01□□□□□ -1.61
SMCHD1-208ENST00000583344 CUX1P39880 1505 aa5.01□□□□□ -1.61
SMCHD1-208ENST00000583344 CFTRP13569 1480 aa5□□□□□ -1.61
SMCHD1-208ENST00000583344 A0A1W2PPL8 197 aa5□□□□□ -1.61
SMCHD1-208ENST00000583344 INSIG1O15503 277 aa5□□□□□ -1.61
SMCHD1-208ENST00000583344 EIF5BO60841 1220 aaKnown RBP5□□□□□ -1.61
SMCHD1-208ENST00000583344 PMPCBO75439 489 aa5□□□□□ -1.61
SMCHD1-208ENST00000583344 A1BGP04217 495 aa5□□□□□ -1.61
SMCHD1-208ENST00000583344 SNHG28P0DPA3 235 aa5□□□□□ -1.61
SMCHD1-208ENST00000583344 MYBP10242 640 aa5□□□□□ -1.61
SMCHD1-208ENST00000583344 LMAN2Q12907 356 aa5□□□□□ -1.61
SMCHD1-208ENST00000583344 SLC13A2Q13183 592 aa5□□□□□ -1.61
SMCHD1-208ENST00000583344 RBMS2Q15434 407 aaKnown RBP5□□□□□ -1.61
SMCHD1-208ENST00000583344 CERCAMQ5T4B2 595 aa5□□□□□ -1.61
SMCHD1-208ENST00000583344 CRELD2Q6UXH1 353 aaPredicted RBP5□□□□□ -1.61
SMCHD1-208ENST00000583344 MRPL10Q7Z7H8 261 aaKnown RBP5□□□□□ -1.61
SMCHD1-208ENST00000583344 SFTPA1Q8IWL2 248 aa5□□□□□ -1.61
SMCHD1-208ENST00000583344 OR6B3Q8NGW1 331 aa5□□□□□ -1.61
SMCHD1-208ENST00000583344 C16orf52Q8NHV5 167 aa5□□□□□ -1.61
SMCHD1-208ENST00000583344 OSR1Q8TAX0 266 aaPredicted RBP5□□□□□ -1.61
SMCHD1-208ENST00000583344 DNAJB14Q8TBM8 379 aa5□□□□□ -1.61
SMCHD1-208ENST00000583344 PNISRQ8TF01 805 aaKnown RBP5□□□□□ -1.61
SMCHD1-208ENST00000583344 RSPRY1Q96DX4 576 aa5□□□□□ -1.61
SMCHD1-208ENST00000583344 POLR3GLQ9BT43 218 aa5□□□□□ -1.61
SMCHD1-208ENST00000583344 RHOBTB2Q9BYZ6 727 aa5□□□□□ -1.61
SMCHD1-208ENST00000583344 EBF3Q9H4W6 596 aa5□□□□□ -1.61
SMCHD1-208ENST00000583344 RAB3GAP2Q9H2M9 1393 aa5□□□□□ -1.61
SMCHD1-208ENST00000583344 KIF21AQ7Z4S6 1674 aa4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 MAPKBP1O60336 1514 aa4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 H3BML4 177 aa4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 PSMD9O00233 223 aa4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 CYP19A1P11511 503 aaPredicted RBP4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 APEHP13798 732 aaKnown RBP4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 PRF1P14222 555 aa4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 COPB1P53618 953 aaKnown RBP4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 SUMO2P61956 95 aaKnown RBP4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 GHRHRQ02643 423 aa4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 SEC23BQ15437 767 aa4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 TRIM71Q2Q1W2 868 aaKnown RBP4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 DCAF12L1Q5VU92 463 aa4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 RUSC1-AS1Q66K80 236 aa4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 ZDHHC24Q6UX98 284 aa4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 SAMD14Q8IZD0 417 aaPredicted RBP4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 SPARTQ8N0X7 666 aa4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 ZCRB1Q8TBF4 217 aaKnown RBP4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 CUL5Q93034 780 aa4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 CCDC17Q96LX7 622 aa4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 ACO2Q99798 780 aaKnown RBP4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 DPH1Q9BZG8 443 aa4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 SMURF2Q9HAU4 748 aa4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 DRG1Q9Y295 367 aaKnown RBP4.99□□□□□ -1.61
SMCHD1-208ENST00000583344 MYMKA6NI61 221 aa4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 BTBD19C9JJ37 291 aa4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 SRGAP2O75044 1071 aa4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 MT-CO3P00414 261 aa4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 TKTP29401 623 aaKnown RBP4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 DIO1P49895 249 aa4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 BCAT1P54687 386 aa4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 RAPGEF1Q13905 1077 aa4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 CCNIQ14094 377 aa4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 KLHL22Q53GT1 634 aa4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 C10orf25Q5T742 122 aa4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 PTCHD4Q6ZW05 846 aa4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 ZNF398Q8TD17 642 aa4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 MAML1Q92585 1016 aa4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 GPATCH3Q96I76 525 aa4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 ATP6V0A4Q9HBG4 840 aa4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 NMRK2Q9NPI5 230 aa4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 ZSCAN32Q9NX65 697 aa4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 ZNF580Q9UK33 172 aa4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 LRRC9Q6ZRR7 1453 aa4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 TIAM1Q13009 1591 aa4.98□□□□□ -1.61
SMCHD1-208ENST00000583344 LY6G6EA0A0G2JKS1 128 aa4.97□□□□□ -1.61
SMCHD1-208ENST00000583344 TBC1D4O60343 1298 aa4.97□□□□□ -1.61
SMCHD1-208ENST00000583344 CCKBRP32239 447 aa4.97□□□□□ -1.61
SMCHD1-208ENST00000583344 ZNF91Q05481 1191 aa4.97□□□□□ -1.61
SMCHD1-208ENST00000583344 RAB32Q13637 225 aa4.97□□□□□ -1.61
SMCHD1-208ENST00000583344 PTPROQ16827 1216 aa4.97□□□□□ -1.61
SMCHD1-208ENST00000583344 TMEM65Q6PI78 240 aa4.97□□□□□ -1.61
SMCHD1-208ENST00000583344 B3GNT9Q6UX72 402 aa4.97□□□□□ -1.61
SMCHD1-208ENST00000583344 KCTD20Q7Z5Y7 419 aa4.97□□□□□ -1.61
SMCHD1-208ENST00000583344 ZDHHC17Q8IUH5 632 aa4.97□□□□□ -1.61
SMCHD1-208ENST00000583344 TPH2Q8IWU9 490 aa4.97□□□□□ -1.61
SMCHD1-208ENST00000583344 ZBTB34Q8NCN2 500 aa4.97□□□□□ -1.61
SMCHD1-208ENST00000583344 OR56A3Q8NH54 315 aa4.97□□□□□ -1.61
SMCHD1-208ENST00000583344 MAFAQ8NHW3 353 aaPredicted RBP4.97□□□□□ -1.61
SMCHD1-208ENST00000583344 MAP4K1Q92918 833 aa4.97□□□□□ -1.61
SMCHD1-208ENST00000583344 TAAR9Q96RI9 348 aa4.97□□□□□ -1.61
SMCHD1-208ENST00000583344 RTFDC1Q9BY42 306 aaPredicted RBP4.97□□□□□ -1.61
SMCHD1-208ENST00000583344 CDY1Q9Y6F8 540 aa4.97□□□□□ -1.61
SMCHD1-208ENST00000583344 FHAD1B1AJZ9 1412 aa4.97□□□□□ -1.61
SMCHD1-208ENST00000583344 FER1L4A9Z1Z3 1794 aa4.96□□□□□ -1.61
SMCHD1-208ENST00000583344 CARMIL1Q5VZK9 1371 aa4.96□□□□□ -1.62
SMCHD1-208ENST00000583344 SPRY2O43597 315 aa4.96□□□□□ -1.62
SMCHD1-208ENST00000583344 ALDH1L1O75891 902 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms