RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 PTCHD4Q6ZW05 846 aa4.3□□□□□ -1.72
SMCHD1-206ENST00000581631 CATIPQ7Z7H3 387 aa4.3□□□□□ -1.72
SMCHD1-206ENST00000581631 C17orf80Q9BSJ5 609 aa4.3□□□□□ -1.72
SMCHD1-206ENST00000581631 TRMOQ9BU70 441 aa4.3□□□□□ -1.72
SMCHD1-206ENST00000581631 GTPBP4Q9BZE4 634 aaKnown RBP4.3□□□□□ -1.72
SMCHD1-206ENST00000581631 LPAR3Q9UBY5 353 aa4.3□□□□□ -1.72
SMCHD1-206ENST00000581631 TMX2Q9Y320 296 aa4.3□□□□□ -1.72
SMCHD1-206ENST00000581631 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.3□□□□□ -1.72
SMCHD1-206ENST00000581631 THP07101 528 aa4.29□□□□□ -1.72
SMCHD1-206ENST00000581631 DIO1P49895 249 aa4.29□□□□□ -1.72
SMCHD1-206ENST00000581631 NPY5RQ15761 445 aa4.29□□□□□ -1.72
SMCHD1-206ENST00000581631 KHDC1LQ5JSQ8 128 aa4.29□□□□□ -1.72
SMCHD1-206ENST00000581631 UBE2Q1Q7Z7E8 422 aa4.29□□□□□ -1.72
SMCHD1-206ENST00000581631 PIM3Q86V86 326 aa4.29□□□□□ -1.72
SMCHD1-206ENST00000581631 ANKRD13BQ86YJ7 626 aa4.29□□□□□ -1.72
SMCHD1-206ENST00000581631 TMEM171Q8WVE6 324 aa4.29□□□□□ -1.72
SMCHD1-206ENST00000581631 KAZALD1Q96I82 304 aa4.29□□□□□ -1.72
SMCHD1-206ENST00000581631 NOP58Q9Y2X3 529 aaKnown RBP4.29□□□□□ -1.72
SMCHD1-206ENST00000581631 C4orf47A7E2U8 309 aa4.28□□□□□ -1.72
SMCHD1-206ENST00000581631 TULP3O75386 442 aa4.28□□□□□ -1.72
SMCHD1-206ENST00000581631 RNF8O76064 485 aa4.28□□□□□ -1.72
SMCHD1-206ENST00000581631 SNUPNO95149 360 aaKnown RBP4.28□□□□□ -1.72
SMCHD1-206ENST00000581631 PHKG2P15735 406 aa4.28□□□□□ -1.72
SMCHD1-206ENST00000581631 RECQLP46063 649 aaPredicted RBP4.28□□□□□ -1.72
SMCHD1-206ENST00000581631 ARFIP2P53365 341 aa4.28□□□□□ -1.72
SMCHD1-206ENST00000581631 RPS13P62277 151 aaKnown RBP4.28□□□□□ -1.72
SMCHD1-206ENST00000581631 HYAL1Q12794 435 aa4.28□□□□□ -1.72
SMCHD1-206ENST00000581631 MTX1Q13505 466 aa4.28□□□□□ -1.72
SMCHD1-206ENST00000581631 MGAT5BQ3V5L5 792 aa4.28□□□□□ -1.72
SMCHD1-206ENST00000581631 ANO7Q6IWH7 933 aa4.28□□□□□ -1.72
SMCHD1-206ENST00000581631 ZNF549Q6P9A3 640 aa4.28□□□□□ -1.72
SMCHD1-206ENST00000581631 ZBTB46Q86UZ6 589 aa4.28□□□□□ -1.72
SMCHD1-206ENST00000581631 ADHFE1Q8IWW8 467 aa4.28□□□□□ -1.72
SMCHD1-206ENST00000581631 MPLKIPQ8TAP9 179 aa4.28□□□□□ -1.72
SMCHD1-206ENST00000581631 BRINP2Q9C0B6 783 aa4.28□□□□□ -1.72
SMCHD1-206ENST00000581631 SPEF1Q9Y4P9 236 aa4.28□□□□□ -1.72
SMCHD1-206ENST00000581631 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.28□□□□□ -1.72
SMCHD1-206ENST00000581631 EVPLQ92817 2033 aa4.28□□□□□ -1.73
SMCHD1-206ENST00000581631 hCG_2014768A0A024R1R8 64 aa4.27□□□□□ -1.73
SMCHD1-206ENST00000581631 EME2A4GXA9 379 aaPredicted RBP4.27□□□□□ -1.73
SMCHD1-206ENST00000581631 CES2O00748 559 aa4.27□□□□□ -1.73
SMCHD1-206ENST00000581631 SPRY2O43597 315 aa4.27□□□□□ -1.73
SMCHD1-206ENST00000581631 XRCC6P12956 609 aaKnown RBP eCLIP4.27□□□□□ -1.73
SMCHD1-206ENST00000581631 COPB1P53618 953 aaKnown RBP4.27□□□□□ -1.73
SMCHD1-206ENST00000581631 SUMO2P61956 95 aaKnown RBP4.27□□□□□ -1.73
SMCHD1-206ENST00000581631 PTCHD3Q3KNS1 767 aa4.27□□□□□ -1.73
SMCHD1-206ENST00000581631 LVRNQ6Q4G3 990 aa4.27□□□□□ -1.73
SMCHD1-206ENST00000581631 COLCA1Q6ZS62 124 aa4.27□□□□□ -1.73
SMCHD1-206ENST00000581631 USP43Q70EL4 1123 aa4.27□□□□□ -1.73
SMCHD1-206ENST00000581631 MMP21Q8N119 569 aa4.27□□□□□ -1.73
SMCHD1-206ENST00000581631 MAFAQ8NHW3 353 aaPredicted RBP4.27□□□□□ -1.73
SMCHD1-206ENST00000581631 B4GALNT2Q8NHY0 566 aa4.27□□□□□ -1.73
SMCHD1-206ENST00000581631 BPIFB1Q8TDL5 484 aa4.27□□□□□ -1.73
SMCHD1-206ENST00000581631 MVB12AQ96EY5 273 aa4.27□□□□□ -1.73
SMCHD1-206ENST00000581631 CDK5RAP3Q96JB5 506 aa4.27□□□□□ -1.73
SMCHD1-206ENST00000581631 DPH1Q9BZG8 443 aa4.27□□□□□ -1.73
SMCHD1-206ENST00000581631 SARS2Q9NP81 518 aaKnown RBP4.27□□□□□ -1.73
SMCHD1-206ENST00000581631 DRG1Q9Y295 367 aaKnown RBP4.27□□□□□ -1.73
SMCHD1-206ENST00000581631 LUC7L2Q9Y383 392 aaKnown RBP4.27□□□□□ -1.73
SMCHD1-206ENST00000581631 ALDH2P05091 517 aa4.26□□□□□ -1.73
SMCHD1-206ENST00000581631 BCAT1P54687 386 aa4.26□□□□□ -1.73
SMCHD1-206ENST00000581631 ANAPC15P60006 121 aa4.26□□□□□ -1.73
SMCHD1-206ENST00000581631 SATB1Q01826 763 aa4.26□□□□□ -1.73
SMCHD1-206ENST00000581631 KRT17Q04695 432 aa4.26□□□□□ -1.73
SMCHD1-206ENST00000581631 MLC1Q15049 377 aa4.26□□□□□ -1.73
SMCHD1-206ENST00000581631 CERCAMQ5T4B2 595 aa4.26□□□□□ -1.73
SMCHD1-206ENST00000581631 TMEM65Q6PI78 240 aa4.26□□□□□ -1.73
SMCHD1-206ENST00000581631 RANBP10Q6VN20 620 aa4.26□□□□□ -1.73
SMCHD1-206ENST00000581631 DCDC5Q6ZRR9 648 aa4.26□□□□□ -1.73
SMCHD1-206ENST00000581631 DNAJC5GQ8N7S2 189 aa4.26□□□□□ -1.73
SMCHD1-206ENST00000581631 CHMP4CQ96CF2 233 aa4.26□□□□□ -1.73
SMCHD1-206ENST00000581631 WDYHV1Q96HA8 205 aa4.26□□□□□ -1.73
SMCHD1-206ENST00000581631 THOC3Q96J01 351 aaKnown RBP4.26□□□□□ -1.73
SMCHD1-206ENST00000581631 P2RX7Q99572 595 aaKnown RBP4.26□□□□□ -1.73
SMCHD1-206ENST00000581631 TRIM54Q9BYV2 358 aa4.26□□□□□ -1.73
SMCHD1-206ENST00000581631 VPS33BQ9H267 617 aa4.26□□□□□ -1.73
SMCHD1-206ENST00000581631 MLXIPQ9HAP2 919 aa4.26□□□□□ -1.73
SMCHD1-206ENST00000581631 GBA2Q9HCG7 927 aaPredicted RBP4.26□□□□□ -1.73
SMCHD1-206ENST00000581631 TMEM8AQ9HCN3 771 aa4.26□□□□□ -1.73
SMCHD1-206ENST00000581631 SEMA4BQ9NPR2 832 aaPredicted RBP4.26□□□□□ -1.73
SMCHD1-206ENST00000581631 TTBK1Q5TCY1 1321 aaPredicted RBP4.25□□□□□ -1.73
SMCHD1-206ENST00000581631 IL33O95760 270 aa4.25□□□□□ -1.73
SMCHD1-206ENST00000581631 CDKN2AP42771 156 aaKnown RBP4.25□□□□□ -1.73
SMCHD1-206ENST00000581631 NEK2P51955 445 aa4.25□□□□□ -1.73
SMCHD1-206ENST00000581631 RHDQ02161 417 aa4.25□□□□□ -1.73
SMCHD1-206ENST00000581631 PLA1AQ53H76 456 aa4.25□□□□□ -1.73
SMCHD1-206ENST00000581631 TMEM63BQ5T3F8 832 aa4.25□□□□□ -1.73
SMCHD1-206ENST00000581631 DAB2IPQ5VWQ8 1189 aa4.25□□□□□ -1.73
SMCHD1-206ENST00000581631 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
SMCHD1-206ENST00000581631 AASDHPPTQ9NRN7 309 aa4.25□□□□□ -1.73
SMCHD1-206ENST00000581631 STXBP5LQ9Y2K9 1186 aa4.25□□□□□ -1.73
SMCHD1-206ENST00000581631 SLC28A2O43868 658 aa4.24□□□□□ -1.73
SMCHD1-206ENST00000581631 AKAP5P24588 427 aa4.24□□□□□ -1.73
SMCHD1-206ENST00000581631 YPEL5P62699 121 aa4.24□□□□□ -1.73
SMCHD1-206ENST00000581631 HSF1Q00613 529 aa4.24□□□□□ -1.73
SMCHD1-206ENST00000581631 TIAL1Q01085 375 aaKnown RBP eCLIP4.24□□□□□ -1.73
SMCHD1-206ENST00000581631 CFHR3Q02985 330 aa4.24□□□□□ -1.73
SMCHD1-206ENST00000581631 CCNIQ14094 377 aa4.24□□□□□ -1.73
SMCHD1-206ENST00000581631 ZNF628Q5EBL2 1059 aa4.24□□□□□ -1.73
SMCHD1-206ENST00000581631 SLC15A4Q8N697 577 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms