RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 ATXN2LQ8WWM7 1075 aaKnown RBP15.91■□□□□ 0.14
MKS1-210ENST00000581180 LRRC4Q9HBW1 653 aa15.91■□□□□ 0.14
MKS1-210ENST00000581180 SCML2Q9UQR0 700 aa15.91■□□□□ 0.14
MKS1-210ENST00000581180 MRPS23Q9Y3D9 190 aaKnown RBP15.91■□□□□ 0.14
MKS1-210ENST00000581180 NCANO14594 1321 aa15.91■□□□□ 0.14
MKS1-210ENST00000581180 A0A1W2PRU2 124 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 AKR1B15C9JRZ8 316 aaPredicted RBP15.9■□□□□ 0.14
MKS1-210ENST00000581180 SERPING1P05155 500 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 UNGP13051 313 aaPredicted RBP15.9■□□□□ 0.14
MKS1-210ENST00000581180 GJA1P17302 382 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 CEBPBP17676 345 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 ACADSBP45954 432 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 TKTL1P51854 596 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 ADIGQ0VDE8 80 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 AAK1Q2M2I8 961 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 PTPN20Q4JDL3 420 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 TRIM72Q6ZMU5 477 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 BHLHA9Q7RTU4 235 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 CCDC186Q7Z3E2 898 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 CNGA4Q8IV77 575 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 DRC7Q8IY82 874 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 TC2NQ8N9U0 490 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 OVCA2Q8WZ82 227 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 FBXO32Q969P5 355 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 SLITRK1Q96PX8 696 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 CPXM1Q96SM3 734 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 PHF7Q9BWX1 381 aaPredicted RBP15.9■□□□□ 0.14
MKS1-210ENST00000581180 ULBP1Q9BZM6 244 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 PDCL3Q9H2J4 239 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 CNGB3Q9NQW8 809 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 ABHD10Q9NUJ1 306 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 GMIPQ9P107 970 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 TJP2Q9UDY2 1190 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 CEP83Q9Y592 693 aa15.9■□□□□ 0.14
MKS1-210ENST00000581180 BZW2Q9Y6E2 419 aaKnown RBP15.9■□□□□ 0.14
MKS1-210ENST00000581180 NCOR1O75376 2440 aa15.89■□□□□ 0.13
MKS1-210ENST00000581180 ZNF840PA6NDX5 716 aa15.89■□□□□ 0.13
MKS1-210ENST00000581180 PLEKP08567 350 aaPredicted RBP15.89■□□□□ 0.13
MKS1-210ENST00000581180 USP17L7P0C7H9 530 aa15.89■□□□□ 0.13
MKS1-210ENST00000581180 LCP1P13796 627 aa15.89■□□□□ 0.13
MKS1-210ENST00000581180 PPP3CCP48454 512 aa15.89■□□□□ 0.13
MKS1-210ENST00000581180 PGFP49763 221 aa15.89■□□□□ 0.13
MKS1-210ENST00000581180 MRPS5P82675 430 aaKnown RBP15.89■□□□□ 0.13
MKS1-210ENST00000581180 TEAD2Q15562 447 aa15.89■□□□□ 0.13
MKS1-210ENST00000581180 SNX30Q5VWJ9 437 aa15.89■□□□□ 0.13
MKS1-210ENST00000581180 GET4Q7L5D6 327 aaPredicted RBP15.89■□□□□ 0.13
MKS1-210ENST00000581180 NPAS3Q8IXF0 933 aa15.89■□□□□ 0.13
MKS1-210ENST00000581180 PDZD8Q8NEN9 1154 aa15.89■□□□□ 0.13
MKS1-210ENST00000581180 SLC30A5Q8TAD4 765 aa15.89■□□□□ 0.13
MKS1-210ENST00000581180 PPP1R13BQ96KQ4 1090 aa15.89■□□□□ 0.13
MKS1-210ENST00000581180 MYADMQ96S97 322 aa15.89■□□□□ 0.13
MKS1-210ENST00000581180 ATXN3LQ9H3M9 355 aa15.89■□□□□ 0.13
MKS1-210ENST00000581180 ARHGAP20Q9P2F6 1191 aa15.89■□□□□ 0.13
MKS1-210ENST00000581180 CHORDC1Q9UHD1 332 aaPredicted RBP15.89■□□□□ 0.13
MKS1-210ENST00000581180 FAM50BQ9Y247 325 aa15.89■□□□□ 0.13
MKS1-210ENST00000581180 USTQ9Y2C2 406 aa15.89■□□□□ 0.13
MKS1-210ENST00000581180 SOBPA7XYQ1 873 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 E5RJQ4 531 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 PIK3R2O00459 728 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 DDX3XO00571 662 aaKnown RBP eCLIP15.88■□□□□ 0.136e-6■□□□□ 8.9
MKS1-210ENST00000581180 ZBED1O96006 694 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 BMP1P13497 986 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 TNFAIP3P21580 790 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 GABRB2P47870 512 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 DAOAP59103 153 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 CYP4F8P98187 520 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 CENPCQ03188 943 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 CLEC16AQ2KHT3 1053 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 STXBP5Q5T5C0 1151 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 NAA35Q5VZE5 725 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 SCD5Q86SK9 330 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 CLEC4CQ8WTT0 213 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 CPA5Q8WXQ8 436 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 ING5Q8WYH8 240 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 NDRG1Q92597 394 aaKnown RBP15.88■□□□□ 0.13
MKS1-210ENST00000581180 FGF13Q92913 245 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 NOX5Q96PH1 765 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 GCNAQ96QF7 691 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 NMUR1Q9HB89 426 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 ST7Q9NRC1 585 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.88■□□□□ 0.13
MKS1-210ENST00000581180 TRPM5Q9NZQ8 1165 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 CDH7Q9ULB5 785 aa15.88■□□□□ 0.13
MKS1-210ENST00000581180 PAPSS1O43252 624 aaPredicted RBP15.87■□□□□ 0.13
MKS1-210ENST00000581180 FBXO21O94952 628 aa15.87■□□□□ 0.13
MKS1-210ENST00000581180 ERBB2P04626 1255 aa15.87■□□□□ 0.13
MKS1-210ENST00000581180 MRE11P49959 708 aa15.87■□□□□ 0.13
MKS1-210ENST00000581180 CDK17Q00537 523 aa15.87■□□□□ 0.13
MKS1-210ENST00000581180 GSE1Q14687 1217 aa15.87■□□□□ 0.13
MKS1-210ENST00000581180 TDRD12Q587J7 1177 aaKnown RBP15.87■□□□□ 0.13
MKS1-210ENST00000581180 TXNDC8Q6A555 127 aa15.87■□□□□ 0.13
MKS1-210ENST00000581180 MON1AQ86VX9 555 aa15.87■□□□□ 0.13
MKS1-210ENST00000581180 SIX6OS1Q8N1H7 587 aa15.87■□□□□ 0.13
MKS1-210ENST00000581180 IRGQQ8WZA9 623 aa15.87■□□□□ 0.13
MKS1-210ENST00000581180 MRPS31Q92665 395 aaKnown RBP15.87■□□□□ 0.13
MKS1-210ENST00000581180 ZSWIM3Q96MP5 696 aa15.87■□□□□ 0.13
MKS1-210ENST00000581180 ASB2Q96Q27 587 aa15.87■□□□□ 0.13
MKS1-210ENST00000581180 SLC46A2Q9BY10 475 aa15.87■□□□□ 0.13
MKS1-210ENST00000581180 TASP1Q9H6P5 420 aa15.87■□□□□ 0.13
MKS1-210ENST00000581180 TLR8Q9NR97 1041 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms