RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 DSPP15924 2871 aaKnown RBP10.58□□□□□ -0.72
RFFL-208ENST00000581039 E2F8A0AVK6 867 aa10.58□□□□□ -0.72
RFFL-208ENST00000581039 F8VP50 259 aa10.58□□□□□ -0.72
RFFL-208ENST00000581039 OAS1P00973 400 aaKnown RBP10.58□□□□□ -0.72
RFFL-208ENST00000581039 CHRM1P11229 460 aaPredicted RBP10.58□□□□□ -0.72
RFFL-208ENST00000581039 CD59P13987 128 aa10.58□□□□□ -0.72
RFFL-208ENST00000581039 WARSP23381 471 aaKnown RBP10.58□□□□□ -0.72
RFFL-208ENST00000581039 GJB2P29033 226 aa10.58□□□□□ -0.72
RFFL-208ENST00000581039 GNL1P36915 607 aaPredicted RBP10.58□□□□□ -0.72
RFFL-208ENST00000581039 TRIP6Q15654 476 aaKnown RBP10.58□□□□□ -0.72
RFFL-208ENST00000581039 DUOXA2Q1HG44 320 aa10.58□□□□□ -0.72
RFFL-208ENST00000581039 LY6G5CQ5SRR4 150 aa10.58□□□□□ -0.72
RFFL-208ENST00000581039 SDE2Q6IQ49 451 aa10.58□□□□□ -0.72
RFFL-208ENST00000581039 SV2BQ7L1I2 683 aa10.58□□□□□ -0.72
RFFL-208ENST00000581039 LIMS2Q7Z4I7 341 aa10.58□□□□□ -0.72
RFFL-208ENST00000581039 RAB44Q7Z6P3 723 aaPredicted RBP10.58□□□□□ -0.72
RFFL-208ENST00000581039 GPD1LQ8N335 351 aa10.58□□□□□ -0.72
RFFL-208ENST00000581039 ZNF513Q8N8E2 541 aaPredicted RBP10.58□□□□□ -0.72
RFFL-208ENST00000581039 NAT16Q8N8M0 369 aa10.58□□□□□ -0.72
RFFL-208ENST00000581039 OTUB2Q96DC9 234 aa10.58□□□□□ -0.72
RFFL-208ENST00000581039 EPSTI1Q96J88 318 aa10.58□□□□□ -0.72
RFFL-208ENST00000581039 CBWD1Q9BRT8 395 aa10.58□□□□□ -0.72
RFFL-208ENST00000581039 SNX25Q9H3E2 840 aa10.58□□□□□ -0.72
RFFL-208ENST00000581039 CAPN10Q9HC96 672 aa10.58□□□□□ -0.72
RFFL-208ENST00000581039 INTS13Q9NVM9 706 aa10.58□□□□□ -0.72
RFFL-208ENST00000581039 DEC1Q9P2X7 70 aa10.58□□□□□ -0.72
RFFL-208ENST00000581039 MYO16Q9Y6X6 1858 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 KIAA1549LQ6ZVL6 1849 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 A0A1W2PQD8 194 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 ZNF233A6NK53 670 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 SH3BP5O60239 455 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 ZNF217O75362 1048 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 TULP3O75386 442 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 HOXB2P14652 356 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 IDEP14735 1019 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 GABRG2P18507 467 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 YWHAQP27348 245 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 SCAPQ12770 1279 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 IFRD2Q12894 506 aaPredicted RBP10.57□□□□□ -0.72
RFFL-208ENST00000581039 SLC14A1Q13336 389 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 ALCAMQ13740 583 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 SF3A1Q15459 793 aaKnown RBP10.57□□□□□ -0.72
RFFL-208ENST00000581039 SURF1Q15526 300 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 ANO4Q32M45 955 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 MDH1BQ5I0G3 518 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 C10orf76Q5T2E6 689 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 RRAGBQ5VZM2 374 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 C19orf48Q6RUI8 117 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 RGL4Q8IZJ4 473 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 TRIML1Q8N9V2 468 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 OR5B17Q8NGF7 314 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 OR2I1PQ8NGU4 316 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 OR6B3Q8NGW1 331 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 KIF2CQ99661 725 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 FAM124BQ9H5Z6 455 aaPredicted RBP10.57□□□□□ -0.72
RFFL-208ENST00000581039 DNAAF2Q9NVR5 837 aaKnown RBP10.57□□□□□ -0.72
RFFL-208ENST00000581039 CALCOCO1Q9P1Z2 691 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 STK17AQ9UEE5 414 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 SH3BP1Q9Y3L3 701 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 GPSM3Q9Y4H4 160 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 DMXL2Q8TDJ6 3036 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 PI4KAP42356 2102 aa10.57□□□□□ -0.72
RFFL-208ENST00000581039 IGHV1OR15-9A0A0B4J2B8 117 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 KIAA0391O15091 583 aaKnown RBP10.56□□□□□ -0.72
RFFL-208ENST00000581039 NDUFS2O75306 463 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 PRPF6O94906 941 aaKnown RBP10.56□□□□□ -0.72
RFFL-208ENST00000581039 CAPNS1P04632 268 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 NEFLP07196 543 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 FAM163BP0C2L3 166 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 GNSP15586 552 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 PTPN1P18031 435 aaKnown RBP10.56□□□□□ -0.72
RFFL-208ENST00000581039 NTSR1P30989 418 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 WASP42768 502 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 CASP5P51878 434 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 PLEKHG6Q3KR16 790 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 HECTD3Q5T447 861 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 SYCP2LQ5T4T6 812 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 LARP1BQ659C4 914 aaKnown RBP10.56□□□□□ -0.72
RFFL-208ENST00000581039 USP49Q70CQ1 688 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 ETFBKMTQ8IXQ9 262 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 CHPFQ8IZ52 775 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 NUP93Q8N1F7 819 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 PHTF2Q8N3S3 785 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 PDZD8Q8NEN9 1154 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 ADAMTS14Q8WXS8 1223 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 DNAJC19Q96DA6 116 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 HSPA12BQ96MM6 686 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 CAMK1GQ96NX5 476 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 MRPL45Q9BRJ2 306 aaKnown RBP10.56□□□□□ -0.72
RFFL-208ENST00000581039 ELOVL4Q9GZR5 314 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 CCDC86Q9H6F5 360 aaKnown RBP10.56□□□□□ -0.72
RFFL-208ENST00000581039 SPHK2Q9NRA0 654 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 OLFML3Q9NRN5 406 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 SUSD2Q9UGT4 822 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 CHORDC1Q9UHD1 332 aaPredicted RBP10.56□□□□□ -0.72
RFFL-208ENST00000581039 ANAPC1Q9H1A4 1944 aa10.56□□□□□ -0.72
RFFL-208ENST00000581039 WDFY3Q8IZQ1 3526 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 HOXC11O43248 304 aaPredicted RBP10.55□□□□□ -0.72
RFFL-208ENST00000581039 COCHO43405 550 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 TACC1O75410 805 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms