RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-208ENST00000579466 A8MXQ7 604 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 SLC9A3R1O14745 358 aaPredicted RBP10.24□□□□□ -0.77
MSI2-208ENST00000579466 TRIM24O15164 1050 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 ADAM23O75077 832 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 OAS1P00973 400 aaKnown RBP10.24□□□□□ -0.77
MSI2-208ENST00000579466 TNNI1P19237 187 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 GNL1P36915 607 aaPredicted RBP10.24□□□□□ -0.77
MSI2-208ENST00000579466 CYP2J2P51589 502 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 TNNC1P63316 161 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 RPL6Q02878 288 aaKnown RBP10.24□□□□□ -0.77
MSI2-208ENST00000579466 ALCAMQ13740 583 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 DUOXA2Q1HG44 320 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 ANO4Q32M45 955 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 C10orf76Q5T2E6 689 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 TDRD10Q5VZ19 366 aaKnown RBP10.24□□□□□ -0.77
MSI2-208ENST00000579466 SCARA5Q6ZMJ2 495 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 CCDC73Q6ZRK6 1079 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 DPH6Q7L8W6 267 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 TRAPPC11Q7Z392 1133 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 SYT12Q8IV01 421 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 WDR49Q8IV35 697 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 KDF1Q8NAX2 398 aaPredicted RBP10.24□□□□□ -0.77
MSI2-208ENST00000579466 GATA6Q92908 595 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 FBXO32Q969P5 355 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 ELMO3Q96BJ8 720 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 SLITRK1Q96PX8 696 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 MED10Q9BTT4 135 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 TTLL2Q9BWV7 592 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 NXF1Q9UBU9 619 aaKnown RBP10.24□□□□□ -0.77
MSI2-208ENST00000579466 SH3BP1Q9Y3L3 701 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 SRPRBQ9Y5M8 271 aaKnown RBP10.24□□□□□ -0.77
MSI2-208ENST00000579466 WDFY3Q8IZQ1 3526 aa10.24□□□□□ -0.77
MSI2-208ENST00000579466 PCDH15Q96QU1 1955 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.23□□□□□ -0.77
MSI2-208ENST00000579466 FRMD3A2A2Y4 597 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 SRRM3A6NNA2 597 aaPredicted RBP10.23□□□□□ -0.77
MSI2-208ENST00000579466 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.23□□□□□ -0.77
MSI2-208ENST00000579466 TNFRSF10BO14763 440 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 CLIC2O15247 247 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 COCHO43405 550 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 OLFM2O95897 454 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 CST3P01034 146 aaPredicted RBP10.23□□□□□ -0.77
MSI2-208ENST00000579466 HOXB2P14652 356 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 PTPN1P18031 435 aaKnown RBP10.23□□□□□ -0.77
MSI2-208ENST00000579466 GRIA2P42262 883 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 KIR2DL1P43626 348 aaPredicted RBP10.23□□□□□ -0.77
MSI2-208ENST00000579466 NOP14P78316 857 aaKnown RBP10.23□□□□□ -0.77
MSI2-208ENST00000579466 SURF1Q15526 300 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 MAP7D1Q3KQU3 841 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 WDR72Q3MJ13 1102 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 BTBD8Q5XKL5 378 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 BBS7Q8IWZ6 715 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 NELFCDQ8IXH7 590 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 CCDC65Q8IXS2 484 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 HDDC3Q8N4P3 179 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 ZNF513Q8N8E2 541 aaPredicted RBP10.23□□□□□ -0.77
MSI2-208ENST00000579466 WBP2Q969T9 261 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 C8orf48Q96LL4 319 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 KCNK16Q96T55 309 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 B3GNT5Q9BYG0 378 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 ELOVL4Q9GZR5 314 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 NACA2Q9H009 215 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 CCSER2Q9H7U1 834 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 EHD2Q9NZN4 543 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 CALCOCO1Q9P1Z2 691 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 CHORDC1Q9UHD1 332 aaPredicted RBP10.23□□□□□ -0.77
MSI2-208ENST00000579466 EVLQ9UI08 416 aaPredicted RBP10.23□□□□□ -0.77
MSI2-208ENST00000579466 CYP8B1Q9UNU6 501 aa10.23□□□□□ -0.77
MSI2-208ENST00000579466 FASNP49327 2511 aaKnown RBP10.22□□□□□ -0.77
MSI2-208ENST00000579466 AP5Z1O43299 807 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 TULP3O75386 442 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 CHRM1P11229 460 aaPredicted RBP10.22□□□□□ -0.77
MSI2-208ENST00000579466 PFKLP17858 780 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 GABRG2P18507 467 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 YWHAQP27348 245 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 EIF2DP41214 584 aaKnown RBP10.22□□□□□ -0.77
MSI2-208ENST00000579466 PPP3CCP48454 512 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 MYL6P60660 151 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 FAM193AP78312 1265 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 ASIC1P78348 528 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 GAD2Q05329 585 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 GFPT1Q06210 699 aaPredicted RBP10.22□□□□□ -0.77
MSI2-208ENST00000579466 ORC1Q13415 861 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 TRPC3Q13507 836 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 SNRNP35Q16560 246 aaKnown RBP10.22□□□□□ -0.77
MSI2-208ENST00000579466 STXBP4Q6ZWJ1 553 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 LIMS2Q7Z4I7 341 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 DDX42Q86XP3 938 aaKnown RBP eCLIP10.22□□□□□ -0.77
MSI2-208ENST00000579466 MIB1Q86YT6 1006 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 NUP93Q8N1F7 819 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 MINDY1Q8N5J2 469 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 B3GALNT2Q8NCR0 500 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 SCAMP5Q8TAC9 235 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 BHMTQ93088 406 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 JAKMIP2Q96AA8 810 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 ZFRQ96KR1 1074 aaKnown RBP10.22□□□□□ -0.77
MSI2-208ENST00000579466 USP28Q96RU2 1077 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 CGRRF1Q99675 332 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 SLC6A17Q9H1V8 727 aa10.22□□□□□ -0.77
MSI2-208ENST00000579466 SMYD3Q9H7B4 428 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms