RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 CER1O95813 267 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 ADH1CP00326 375 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 NFICP08651 508 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 OR52Z1P0C646 297 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 MAPTP10636 758 aaKnown RBP7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 GABRG2P18507 467 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 SYT1P21579 422 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 SCP2P22307 547 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 TIE1P35590 1138 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 TAF6P49848 677 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 GUCY2FP51841 1108 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 TSPY1Q01534 308 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 SPAG1Q07617 926 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 RESTQ13127 1097 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 PKP1Q13835 747 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 SMAD1Q15797 465 aaKnown RBP7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 ENOX2Q16206 610 aaKnown RBP7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 SEZ6Q53EL9 994 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 WDR45BQ5MNZ6 344 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 IL27RAQ6UWB1 636 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 DBX2Q6ZNG2 339 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 LRRTM3Q86VH5 581 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 PGBD3Q8N328 593 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 TRIML1Q8N9V2 468 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 TMEM161BQ8NDZ6 487 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 DNASE2BQ8WZ79 361 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 NXPE2Q96DL1 559 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 LINC00597Q9H2U6 94 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 ARHGEF4Q9NR80 690 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 CALCOCO1Q9P1Z2 691 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 MAGED2Q9UNF1 606 aaPredicted RBP7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 MTMR6Q9Y217 621 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 SVILO95425 2214 aa7.7□□□□□ -1.18
CDK5RAP3-209ENST00000578663 A0A1B0GTW7 788 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 BLACEA4D250 179 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 ANTXRLA6NF34 631 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 CYB561D2O14569 222 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 OGTO15294 1046 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 SLC16A4O15374 487 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 RRP8O43159 456 aaKnown RBP7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 ZBTB24O43167 697 aaPredicted RBP7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 STX6O43752 255 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 PRPF40AO75400 957 aaKnown RBP7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 PIGRP01833 764 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 AFPP02771 609 aaKnown RBP7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 HDCP19113 662 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 PDCP20941 246 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 GUCY2CP25092 1073 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 CDC25AP30304 524 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 MCM7P33993 719 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 CCT6AP40227 531 aaKnown RBP7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 FXR2P51116 673 aaKnown RBP eCLIP7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 SMTNP53814 917 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 SLC7A9P82251 487 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 MESP2Q0VG99 397 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 DHCR24Q15392 516 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 SAFBQ15424 915 aaKnown RBP eCLIP7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 ECM1Q16610 540 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 CFAP221Q4G0U5 840 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 ZC2HC1CQ53FD0 456 aaPredicted RBP7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 FOXD4L5Q5VV16 416 aaPredicted RBP7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 WSCD1Q658N2 575 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 MCTP1Q6DN14 999 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 TMEM130Q8N3G9 435 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 PHTF2Q8N3S3 785 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 ARL14EPQ8N8R7 260 aaPredicted RBP7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 SNIP1Q8TAD8 396 aaKnown RBP7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 FOXD4L4Q8WXT5 416 aaPredicted RBP7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 POM121Q96HA1 1249 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 FUBP3Q96I24 572 aaKnown RBP eCLIP7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 CYP2S1Q96SQ9 504 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 DUSP9Q99956 384 aaKnown RBP7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 PYM1Q9BRP8 204 aaKnown RBP7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 HAPLN2Q9GZV7 340 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 ASB7Q9H672 318 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 RPF1Q9H9Y2 349 aaKnown RBP7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 CD248Q9HCU0 757 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 POLD4Q9HCU8 107 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 KIAA1024Q9UPX6 916 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 C2CD2Q9Y426 696 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 TCHHQ07283 1943 aa7.69□□□□□ -1.18
CDK5RAP3-209ENST00000578663 MYH11P35749 1972 aa7.68□□□□□ -1.18
CDK5RAP3-209ENST00000578663 A0A1W2PQF6 199 aa7.68□□□□□ -1.18
CDK5RAP3-209ENST00000578663 C2orf78A6NCI8 922 aa7.68□□□□□ -1.18
CDK5RAP3-209ENST00000578663 LEFTY2O00292 366 aa7.68□□□□□ -1.18
CDK5RAP3-209ENST00000578663 PLK4O00444 970 aa7.68□□□□□ -1.18
CDK5RAP3-209ENST00000578663 HOXC11O43248 304 aaPredicted RBP7.68□□□□□ -1.18
CDK5RAP3-209ENST00000578663 OLFM2O95897 454 aa7.68□□□□□ -1.18
CDK5RAP3-209ENST00000578663 ATXN1LP0C7T5 689 aaKnown RBP7.68□□□□□ -1.18
CDK5RAP3-209ENST00000578663 ADH5P11766 374 aa7.68□□□□□ -1.18
CDK5RAP3-209ENST00000578663 HLA-EP13747 358 aa7.68□□□□□ -1.18
CDK5RAP3-209ENST00000578663 PLS3P13797 630 aa7.68□□□□□ -1.18
CDK5RAP3-209ENST00000578663 HOXB2P14652 356 aa7.68□□□□□ -1.18
CDK5RAP3-209ENST00000578663 NTSR1P30989 418 aa7.68□□□□□ -1.18
CDK5RAP3-209ENST00000578663 DDIT3P35638 169 aa7.68□□□□□ -1.18
CDK5RAP3-209ENST00000578663 TNFSF9P41273 254 aa7.68□□□□□ -1.18
CDK5RAP3-209ENST00000578663 MATKP42679 507 aa7.68□□□□□ -1.18
CDK5RAP3-209ENST00000578663 MATR3P43243 847 aaKnown RBP eCLIP7.68□□□□□ -1.18
CDK5RAP3-209ENST00000578663 MAGEA11P43364 429 aa7.68□□□□□ -1.18
CDK5RAP3-209ENST00000578663 GPR15P49685 360 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms