RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 MIF4GDA9UHW6 222 aaKnown RBP14.09□□□□□ -0.15
SRSF1-202ENST00000578430 TNFRSF10BO14763 440 aa14.09□□□□□ -0.15
SRSF1-202ENST00000578430 HSF2BPO75031 334 aa14.09□□□□□ -0.15
SRSF1-202ENST00000578430 ZBED1O96006 694 aa14.09□□□□□ -0.15
SRSF1-202ENST00000578430 CA3P07451 260 aa14.09□□□□□ -0.15
SRSF1-202ENST00000578430 ATF2P15336 505 aa14.09□□□□□ -0.15
SRSF1-202ENST00000578430 PRLRP16471 622 aa14.09□□□□□ -0.15
SRSF1-202ENST00000578430 SMC1AQ14683 1233 aaKnown RBP14.09□□□□□ -0.15
SRSF1-202ENST00000578430 PAPD7Q5XG87 772 aaKnown RBP14.09□□□□□ -0.15
SRSF1-202ENST00000578430 LLGL2Q6P1M3 1020 aa14.09□□□□□ -0.15
SRSF1-202ENST00000578430 BEND5Q7L4P6 421 aa14.09□□□□□ -0.15
SRSF1-202ENST00000578430 TMC7Q7Z402 723 aa14.09□□□□□ -0.15
SRSF1-202ENST00000578430 PHLDB2Q86SQ0 1253 aa14.09□□□□□ -0.15
SRSF1-202ENST00000578430 NT5DC3Q86UY8 548 aa14.09□□□□□ -0.15
SRSF1-202ENST00000578430 SCN4BQ8IWT1 228 aa14.09□□□□□ -0.15
SRSF1-202ENST00000578430 ATAD1Q8NBU5 361 aa14.09□□□□□ -0.15
SRSF1-202ENST00000578430 SPPL3Q8TCT6 385 aa14.09□□□□□ -0.15
SRSF1-202ENST00000578430 ZNF592Q92610 1267 aa14.09□□□□□ -0.15
SRSF1-202ENST00000578430 EMILIN2Q9BXX0 1053 aa14.09□□□□□ -0.15
SRSF1-202ENST00000578430 RHOBTB2Q9BYZ6 727 aa14.09□□□□□ -0.15
SRSF1-202ENST00000578430 FBXO44Q9H4M3 255 aa14.09□□□□□ -0.15
SRSF1-202ENST00000578430 EHD2Q9NZN4 543 aa14.09□□□□□ -0.15
SRSF1-202ENST00000578430 CHORDC1Q9UHD1 332 aaPredicted RBP14.09□□□□□ -0.15
SRSF1-202ENST00000578430 ALG6Q9Y672 507 aa14.09□□□□□ -0.15
SRSF1-202ENST00000578430 PATJQ8NI35 1801 aa14.08□□□□□ -0.15
SRSF1-202ENST00000578430 GRXCR1A8MXD5 290 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 DPYSL4O14531 572 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 ADAM12O43184 909 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 LPXNO60711 386 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 RTN3O95197 1032 aaPredicted RBP14.08□□□□□ -0.16
SRSF1-202ENST00000578430 CXCL14O95715 111 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 ADH1AP07327 375 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 RPL17P18621 184 aaKnown RBP14.08□□□□□ -0.16
SRSF1-202ENST00000578430 RFC1P35251 1148 aaPredicted RBP14.08□□□□□ -0.16
SRSF1-202ENST00000578430 ZNF143P52747 638 aaPredicted RBP14.08□□□□□ -0.16
SRSF1-202ENST00000578430 DAOAP59103 153 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 RPL7AP62424 266 aaKnown RBP14.08□□□□□ -0.16
SRSF1-202ENST00000578430 ADCY1Q08828 1119 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 RPS6KA1Q15418 735 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 MGAT5BQ3V5L5 792 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 FAM109BQ6ICB4 259 aaPredicted RBP14.08□□□□□ -0.16
SRSF1-202ENST00000578430 NUP93Q8N1F7 819 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 POF1BQ8WVV4 589 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 GOLGA1Q92805 767 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 PGLYRP2Q96PD5 576 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 C17orf80Q9BSJ5 609 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 CNPY3Q9BT09 278 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 ULBP1Q9BZM6 244 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 TLR9Q9NR96 1032 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 TMEM51Q9NW97 253 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 RRN3Q9NYV6 651 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 IL37Q9NZH6 218 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 EYSQ5T1H1 3165 aa14.08□□□□□ -0.16
SRSF1-202ENST00000578430 CCDC66A2RUB6 948 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 C2CD4BA6NLJ0 364 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 PIK3R2O00459 728 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 TEX28O15482 410 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 SPOPO43791 374 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 DAB1O75553 588 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 VNN2O95498 520 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 FTCDO95954 541 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 TCP1P17987 556 aaKnown RBP14.07□□□□□ -0.16
SRSF1-202ENST00000578430 GPD1P21695 349 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 COMTP21964 271 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 DNAJB2P25686 324 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 PSMA2P25787 234 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 ELF1P32519 619 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 PTPN9P43378 593 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 SLC5A3P53794 718 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 YWHAZP63104 245 aaKnown RBP14.07□□□□□ -0.16
SRSF1-202ENST00000578430 DUSP4Q13115 394 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 RTL10Q7L3V2 364 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 TCEAL8Q8IYN2 117 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 ARHGAP18Q8N392 663 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 UBL4BQ8N7F7 174 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 MRPL43Q8N983 215 aaKnown RBP14.07□□□□□ -0.16
SRSF1-202ENST00000578430 JOSD2Q8TAC2 188 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 KHSRPQ92945 711 aaKnown RBP eCLIP14.07□□□□□ -0.162e-17■□□□□ 9.7
SRSF1-202ENST00000578430 HES6Q96HZ4 224 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 TCF25Q9BQ70 676 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 TLR10Q9BXR5 811 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 LMAN2LQ9H0V9 348 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 POPDC2Q9HBU9 364 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 ENTPD7Q9NQZ7 604 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 SNX12Q9UMY4 172 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 SCML2Q9UQR0 700 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 HYOU1Q9Y4L1 999 aa14.07□□□□□ -0.16
SRSF1-202ENST00000578430 PLXNA4Q9HCM2 1894 aa14.06□□□□□ -0.16
SRSF1-202ENST00000578430 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.06□□□□□ -0.16
SRSF1-202ENST00000578430 FAM92AA1XBS5 289 aa14.06□□□□□ -0.16
SRSF1-202ENST00000578430 SPDYE4A6NLX3 237 aa14.06□□□□□ -0.16
SRSF1-202ENST00000578430 TMEM110-MUSTN1A8MSY1 372 aa14.06□□□□□ -0.16
SRSF1-202ENST00000578430 H3BNC9 293 aa14.06□□□□□ -0.16
SRSF1-202ENST00000578430 CES2O00748 559 aa14.06□□□□□ -0.16
SRSF1-202ENST00000578430 FSCN2O14926 492 aa14.06□□□□□ -0.16
SRSF1-202ENST00000578430 RNF8O76064 485 aa14.06□□□□□ -0.16
SRSF1-202ENST00000578430 GJB6O95452 261 aa14.06□□□□□ -0.16
SRSF1-202ENST00000578430 LTFP02788 710 aa14.06□□□□□ -0.16
SRSF1-202ENST00000578430 ATP1A1P05023 1023 aaKnown RBP14.06□□□□□ -0.16
SRSF1-202ENST00000578430 CNPP09543 421 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms