RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 GZF1Q9H116 711 aaPredicted RBP22.33■■□□□ 1.17
TSEN54-205ENST00000578415 TNMDQ9H2S6 317 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 AGPAT3Q9NRZ7 376 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 KBTBD4Q9NVX7 518 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 CIZ1Q9ULV3 898 aaPredicted RBP22.33■■□□□ 1.17
TSEN54-205ENST00000578415 ASPMQ8IZT6 3477 aa22.33■■□□□ 1.16
TSEN54-205ENST00000578415 TNNI1P19237 187 aa22.32■■□□□ 1.16
TSEN54-205ENST00000578415 PSMD6Q15008 389 aa22.32■■□□□ 1.16
TSEN54-205ENST00000578415 WDR72Q3MJ13 1102 aa22.32■■□□□ 1.16
TSEN54-205ENST00000578415 LY6G5CQ5SRR4 150 aa22.32■■□□□ 1.16
TSEN54-205ENST00000578415 KDF1Q8NAX2 398 aaPredicted RBP22.32■■□□□ 1.16
TSEN54-205ENST00000578415 B3GALNT2Q8NCR0 500 aa22.32■■□□□ 1.16
TSEN54-205ENST00000578415 DEFB124Q8NES8 71 aa22.32■■□□□ 1.16
TSEN54-205ENST00000578415 HMGB4Q8WW32 186 aa22.32■■□□□ 1.16
TSEN54-205ENST00000578415 ADAM33Q9BZ11 813 aa22.32■■□□□ 1.16
TSEN54-205ENST00000578415 POLMQ9NP87 494 aaPredicted RBP22.32■■□□□ 1.16
TSEN54-205ENST00000578415 CACNA1GO43497 2377 aa22.32■■□□□ 1.16
TSEN54-205ENST00000578415 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.31■■□□□ 1.16
TSEN54-205ENST00000578415 COCHO43405 550 aa22.31■■□□□ 1.16
TSEN54-205ENST00000578415 YWHAQP27348 245 aa22.31■■□□□ 1.16
TSEN54-205ENST00000578415 TNFRSF4P43489 277 aa22.31■■□□□ 1.16
TSEN54-205ENST00000578415 TNNC1P63316 161 aa22.31■■□□□ 1.16
TSEN54-205ENST00000578415 CYP24A1Q07973 514 aa22.31■■□□□ 1.16
TSEN54-205ENST00000578415 LMAN2Q12907 356 aa22.31■■□□□ 1.16
TSEN54-205ENST00000578415 SYT12Q8IV01 421 aa22.31■■□□□ 1.16
TSEN54-205ENST00000578415 ETFBKMTQ8IXQ9 262 aa22.31■■□□□ 1.16
TSEN54-205ENST00000578415 NUP93Q8N1F7 819 aa22.31■■□□□ 1.16
TSEN54-205ENST00000578415 ZNF507Q8TCN5 953 aa22.31■■□□□ 1.16
TSEN54-205ENST00000578415 ZNF516Q92618 1163 aa22.31■■□□□ 1.16
TSEN54-205ENST00000578415 CCDC127Q96BQ5 260 aa22.31■■□□□ 1.16
TSEN54-205ENST00000578415 XYLT2Q9H1B5 865 aa22.31■■□□□ 1.16
TSEN54-205ENST00000578415 BCCIPQ9P287 314 aaKnown RBP eCLIP22.31■■□□□ 1.16
TSEN54-205ENST00000578415 TBC1D14Q9P2M4 693 aa22.31■■□□□ 1.16
TSEN54-205ENST00000578415 FAM208BQ5VWN6 2430 aa22.31■■□□□ 1.16
TSEN54-205ENST00000578415 TCRBV21S2A2A0A5A6 115 aa22.3■■□□□ 1.16
TSEN54-205ENST00000578415 E2F8A0AVK6 867 aa22.3■■□□□ 1.16
TSEN54-205ENST00000578415 A8MXQ7 604 aa22.3■■□□□ 1.16
TSEN54-205ENST00000578415 MAP3K13O43283 966 aa22.3■■□□□ 1.16
TSEN54-205ENST00000578415 STAU1O95793 577 aaKnown RBP22.3■■□□□ 1.16
TSEN54-205ENST00000578415 NASPP49321 788 aaPredicted RBP22.3■■□□□ 1.16
TSEN54-205ENST00000578415 MYL6P60660 151 aa22.3■■□□□ 1.16
TSEN54-205ENST00000578415 GATA6Q92908 595 aa22.3■■□□□ 1.16
TSEN54-205ENST00000578415 FBXO32Q969P5 355 aa22.3■■□□□ 1.16
TSEN54-205ENST00000578415 KCNK16Q96T55 309 aa22.3■■□□□ 1.16
TSEN54-205ENST00000578415 SCNM1Q9BWG6 230 aa22.3■■□□□ 1.16
TSEN54-205ENST00000578415 NUSAP1Q9BXS6 441 aaKnown RBP22.3■■□□□ 1.16
TSEN54-205ENST00000578415 MTMR6Q9Y217 621 aa22.3■■□□□ 1.16
TSEN54-205ENST00000578415 ATXN2Q99700 1313 aaKnown RBP22.3■■□□□ 1.16
TSEN54-205ENST00000578415 CLIC2O15247 247 aa22.29■■□□□ 1.16
TSEN54-205ENST00000578415 ZZEF1O43149 2961 aa22.29■■□□□ 1.16
TSEN54-205ENST00000578415 RTN3O95197 1032 aaPredicted RBP22.29■■□□□ 1.16
TSEN54-205ENST00000578415 ENGP17813 658 aa22.29■■□□□ 1.16
TSEN54-205ENST00000578415 MAPK8P45983 427 aa22.29■■□□□ 1.16
TSEN54-205ENST00000578415 CYP2J2P51589 502 aa22.29■■□□□ 1.16
TSEN54-205ENST00000578415 ASIC1P78348 528 aa22.29■■□□□ 1.16
TSEN54-205ENST00000578415 SPDYCQ5MJ68 293 aa22.29■■□□□ 1.16
TSEN54-205ENST00000578415 FAM26FQ5R3K3 315 aa22.29■■□□□ 1.16
TSEN54-205ENST00000578415 LYSMD4Q5XG99 296 aa22.29■■□□□ 1.16
TSEN54-205ENST00000578415 PDZD8Q8NEN9 1154 aa22.29■■□□□ 1.16
TSEN54-205ENST00000578415 SCAMP5Q8TAC9 235 aa22.29■■□□□ 1.16
TSEN54-205ENST00000578415 OVCA2Q8WZ82 227 aa22.29■■□□□ 1.16
TSEN54-205ENST00000578415 WBP2Q969T9 261 aa22.29■■□□□ 1.16
TSEN54-205ENST00000578415 OTUB2Q96DC9 234 aa22.29■■□□□ 1.16
TSEN54-205ENST00000578415 IL37Q9NZH6 218 aa22.29■■□□□ 1.16
TSEN54-205ENST00000578415 NXF1Q9UBU9 619 aaKnown RBP22.29■■□□□ 1.16
TSEN54-205ENST00000578415 CHORDC1Q9UHD1 332 aaPredicted RBP22.29■■□□□ 1.16
TSEN54-205ENST00000578415 HCN2Q9UL51 889 aa22.29■■□□□ 1.16
TSEN54-205ENST00000578415 HOXC11O43248 304 aaPredicted RBP22.28■■□□□ 1.16
TSEN54-205ENST00000578415 ITPKAP23677 461 aa22.28■■□□□ 1.16
TSEN54-205ENST00000578415 GAD2Q05329 585 aa22.28■■□□□ 1.16
TSEN54-205ENST00000578415 HECTD3Q5T447 861 aa22.28■■□□□ 1.16
TSEN54-205ENST00000578415 SNX30Q5VWJ9 437 aa22.28■■□□□ 1.16
TSEN54-205ENST00000578415 PEAR1Q5VY43 1037 aaPredicted RBP22.28■■□□□ 1.16
TSEN54-205ENST00000578415 CNNM4Q6P4Q7 775 aa22.28■■□□□ 1.16
TSEN54-205ENST00000578415 SLC23A3Q6PIS1 610 aa22.28■■□□□ 1.16
TSEN54-205ENST00000578415 PAQR9Q6ZVX9 377 aa22.28■■□□□ 1.16
TSEN54-205ENST00000578415 FAM35AQ86V20 835 aa22.28■■□□□ 1.16
TSEN54-205ENST00000578415 BBS7Q8IWZ6 715 aa22.28■■□□□ 1.16
TSEN54-205ENST00000578415 NELFCDQ8IXH7 590 aa22.28■■□□□ 1.16
TSEN54-205ENST00000578415 PGBD3Q8N328 593 aa22.28■■□□□ 1.16
TSEN54-205ENST00000578415 NAT16Q8N8M0 369 aa22.28■■□□□ 1.16
TSEN54-205ENST00000578415 XXYLT1Q8NBI6 393 aa22.28■■□□□ 1.16
TSEN54-205ENST00000578415 SCFD1Q8WVM8 642 aa22.28■■□□□ 1.16
TSEN54-205ENST00000578415 LRRC27Q9C0I9 530 aa22.28■■□□□ 1.16
TSEN54-205ENST00000578415 SMYD3Q9H7B4 428 aa22.28■■□□□ 1.16
TSEN54-205ENST00000578415 CCSER2Q9H7U1 834 aa22.28■■□□□ 1.16
TSEN54-205ENST00000578415 PILRBQ9UKJ0 227 aa22.28■■□□□ 1.16
TSEN54-205ENST00000578415 ASCC3Q8N3C0 2202 aaKnown RBP22.28■■□□□ 1.16
TSEN54-205ENST00000578415 TBC1D3BA6NDS4 549 aa22.27■■□□□ 1.16
TSEN54-205ENST00000578415 TULP3O75386 442 aa22.27■■□□□ 1.16
TSEN54-205ENST00000578415 ATICP31939 592 aa22.27■■□□□ 1.16
TSEN54-205ENST00000578415 SLC5A3P53794 718 aa22.27■■□□□ 1.16
TSEN54-205ENST00000578415 EHHADHQ08426 723 aa22.27■■□□□ 1.16
TSEN54-205ENST00000578415 TRPC3Q13507 836 aa22.27■■□□□ 1.16
TSEN54-205ENST00000578415 PIP4P1Q86T03 277 aa22.27■■□□□ 1.16
TSEN54-205ENST00000578415 ZNF513Q8N8E2 541 aaPredicted RBP22.27■■□□□ 1.16
TSEN54-205ENST00000578415 LINC00301Q8NCQ3 95 aa22.27■■□□□ 1.16
TSEN54-205ENST00000578415 DUSP9Q99956 384 aaKnown RBP22.27■■□□□ 1.16
TSEN54-205ENST00000578415 CUEDC2Q9H467 287 aa22.27■■□□□ 1.16
TSEN54-205ENST00000578415 FSCN3Q9NQT6 498 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms