RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 SMARCB1Q12824 385 aa23.97■■□□□ 1.43
LIMD2-205ENST00000578402 SMC1AQ14683 1233 aaKnown RBP23.97■■□□□ 1.43
LIMD2-205ENST00000578402 CTXN3Q4LDR2 81 aa23.97■■□□□ 1.43
LIMD2-205ENST00000578402 ODF2Q5BJF6 829 aa23.97■■□□□ 1.43
LIMD2-205ENST00000578402 CCDC50Q8IVM0 306 aa23.97■■□□□ 1.43
LIMD2-205ENST00000578402 KLHL7Q8IXQ5 586 aa23.97■■□□□ 1.43
LIMD2-205ENST00000578402 C12orf50Q8NA57 414 aaPredicted RBP23.97■■□□□ 1.43
LIMD2-205ENST00000578402 IRGQQ8WZA9 623 aa23.97■■□□□ 1.43
LIMD2-205ENST00000578402 CENPIQ92674 756 aaPredicted RBP23.97■■□□□ 1.43
LIMD2-205ENST00000578402 CFAP57Q96MR6 1250 aa23.97■■□□□ 1.43
LIMD2-205ENST00000578402 RUNDC3BQ96NL0 473 aa23.97■■□□□ 1.43
LIMD2-205ENST00000578402 SLITRK1Q96PX8 696 aa23.97■■□□□ 1.43
LIMD2-205ENST00000578402 OSBPL8Q9BZF1 889 aa23.97■■□□□ 1.43
LIMD2-205ENST00000578402 STIM2Q9P246 746 aa23.97■■□□□ 1.43
LIMD2-205ENST00000578402 PHF2O75151 1096 aa23.96■■□□□ 1.43
LIMD2-205ENST00000578402 TRUB2O95900 331 aaKnown RBP23.96■■□□□ 1.43
LIMD2-205ENST00000578402 IL1R2P27930 398 aa23.96■■□□□ 1.43
LIMD2-205ENST00000578402 CHRNA3P32297 505 aa23.96■■□□□ 1.43
LIMD2-205ENST00000578402 MATKP42679 507 aa23.96■■□□□ 1.43
LIMD2-205ENST00000578402 DAOAP59103 153 aa23.96■■□□□ 1.43
LIMD2-205ENST00000578402 YWHAZP63104 245 aaKnown RBP23.96■■□□□ 1.43
LIMD2-205ENST00000578402 SIX1Q15475 284 aaPredicted RBP23.96■■□□□ 1.43
LIMD2-205ENST00000578402 SLC39A12Q504Y0 691 aa23.96■■□□□ 1.43
LIMD2-205ENST00000578402 FBXO38Q6PIJ6 1188 aa23.96■■□□□ 1.43
LIMD2-205ENST00000578402 VSTM1Q6UX27 236 aa23.96■■□□□ 1.43
LIMD2-205ENST00000578402 ANKS3Q6ZW76 656 aa23.96■■□□□ 1.43
LIMD2-205ENST00000578402 MAATS1Q7Z4T9 603 aa23.96■■□□□ 1.43
LIMD2-205ENST00000578402 CMTR2Q8IYT2 770 aaKnown RBP23.96■■□□□ 1.43
LIMD2-205ENST00000578402 CCDC26Q8TAB7 109 aa23.96■■□□□ 1.43
LIMD2-205ENST00000578402 FAM172AQ8WUF8 416 aa23.96■■□□□ 1.43
LIMD2-205ENST00000578402 TBCBQ99426 244 aa23.96■■□□□ 1.43
LIMD2-205ENST00000578402 EFR3BQ9Y2G0 817 aa23.96■■□□□ 1.43
LIMD2-205ENST00000578402 TBC1D4O60343 1298 aa23.95■■□□□ 1.43
LIMD2-205ENST00000578402 MAGEA11P43364 429 aa23.95■■□□□ 1.43
LIMD2-205ENST00000578402 KLF1Q13351 362 aaPredicted RBP23.95■■□□□ 1.43
LIMD2-205ENST00000578402 PPIGQ13427 754 aaKnown RBP eCLIP23.95■■□□□ 1.43
LIMD2-205ENST00000578402 C15orf59Q2T9L4 293 aaPredicted RBP23.95■■□□□ 1.43
LIMD2-205ENST00000578402 ATP13A4Q4VNC1 1196 aa23.95■■□□□ 1.43
LIMD2-205ENST00000578402 TXNRD3NBQ6F5E7 133 aa23.95■■□□□ 1.43
LIMD2-205ENST00000578402 STRADAQ7RTN6 431 aa23.95■■□□□ 1.43
LIMD2-205ENST00000578402 CEP57Q86XR8 500 aa23.95■■□□□ 1.43
LIMD2-205ENST00000578402 PRELID2Q8N945 189 aa23.95■■□□□ 1.43
LIMD2-205ENST00000578402 CMASQ8NFW8 434 aaPredicted RBP23.95■■□□□ 1.43
LIMD2-205ENST00000578402 TEKT4Q8WW24 435 aa23.95■■□□□ 1.43
LIMD2-205ENST00000578402 SLC2A13Q96QE2 648 aa23.95■■□□□ 1.43
LIMD2-205ENST00000578402 TTPALQ9BTX7 342 aa23.95■■□□□ 1.43
LIMD2-205ENST00000578402 RHOBTB2Q9BYZ6 727 aa23.95■■□□□ 1.43
LIMD2-205ENST00000578402 ULBP1Q9BZM6 244 aa23.95■■□□□ 1.43
LIMD2-205ENST00000578402 DDX47Q9H0S4 455 aaKnown RBP23.95■■□□□ 1.43
LIMD2-205ENST00000578402 NR2E1Q9Y466 385 aa23.95■■□□□ 1.43
LIMD2-205ENST00000578402 PRPSAP2O60256 369 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 ZBED1O96006 694 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 RALAP11233 206 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 EN2P19622 333 aaPredicted RBP23.94■■□□□ 1.42
LIMD2-205ENST00000578402 NOS2P35228 1153 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 DEFB103AP81534 67 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 BOLA3Q53S33 107 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 ZFYVE27Q5T4F4 411 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 PM20D1Q6GTS8 502 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 SPOCD1Q6ZMY3 1216 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 GPRIN1Q7Z2K8 1008 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 TMEM173Q86WV6 379 aaPredicted RBP23.94■■□□□ 1.42
LIMD2-205ENST00000578402 RNF168Q8IYW5 571 aaPredicted RBP23.94■■□□□ 1.42
LIMD2-205ENST00000578402 FAM149B1Q96BN6 582 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 IGSF21Q96ID5 467 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 POPDC2Q9HBU9 364 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 HOMER3Q9NSC5 361 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 PRKAG2Q9UGJ0 569 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 PCDHB5Q9Y5E4 795 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 USP3Q9Y6I4 520 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 NT5C1B-RDH14C9J2C7 533 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 RAD51CO43502 376 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 ERLIN1O75477 346 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 RARAP10276 462 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 NDUFV1P49821 464 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 VSNL1P62760 191 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 ATP11AP98196 1134 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 DHX34Q14147 1143 aaKnown RBP23.94■■□□□ 1.42
LIMD2-205ENST00000578402 TAZQ16635 292 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 SLC25A52Q3SY17 297 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 ZDHHC14Q8IZN3 488 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 BCL7CQ8WUZ0 217 aaPredicted RBP23.94■■□□□ 1.42
LIMD2-205ENST00000578402 HNRNPLLQ8WVV9 542 aaKnown RBP23.94■■□□□ 1.42
LIMD2-205ENST00000578402 NT5C3BQ969T7 300 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 RNF25Q96BH1 459 aaPredicted RBP23.94■■□□□ 1.42
LIMD2-205ENST00000578402 TRIM62Q9BVG3 475 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 LRRC19Q9H756 370 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 ZWILCHQ9H900 591 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 NGRNQ9NPE2 291 aaKnown RBP23.94■■□□□ 1.42
LIMD2-205ENST00000578402 DMGDHQ9UI17 866 aaKnown RBP23.94■■□□□ 1.42
LIMD2-205ENST00000578402 STAP1Q9ULZ2 295 aa23.94■■□□□ 1.42
LIMD2-205ENST00000578402 COL4A4P53420 1690 aaPredicted RBP23.93■■□□□ 1.42
LIMD2-205ENST00000578402 LRRD1A4D1F6 860 aa23.93■■□□□ 1.42
LIMD2-205ENST00000578402 TNRC18O15417 2968 aaPredicted RBP23.93■■□□□ 1.42
LIMD2-205ENST00000578402 OR4Q2P0C623 313 aa23.93■■□□□ 1.42
LIMD2-205ENST00000578402 LAG3P18627 525 aa23.93■■□□□ 1.42
LIMD2-205ENST00000578402 TNFRSF8P28908 595 aa23.93■■□□□ 1.42
LIMD2-205ENST00000578402 PBX3P40426 434 aa23.93■■□□□ 1.42
LIMD2-205ENST00000578402 CDKN2BP42772 138 aa23.93■■□□□ 1.42
LIMD2-205ENST00000578402 FNTAP49354 379 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms