RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 TGFB1I1O43294 461 aa12.55□□□□□ -0.4
CDH8-202ENST00000577228 RTN3O95197 1032 aaPredicted RBP12.55□□□□□ -0.4
CDH8-202ENST00000577228 CEACAM1P13688 526 aa12.55□□□□□ -0.4
CDH8-202ENST00000577228 TNFRSF4P43489 277 aa12.55□□□□□ -0.4
CDH8-202ENST00000577228 KIR2DL1P43626 348 aaPredicted RBP12.55□□□□□ -0.4
CDH8-202ENST00000577228 NASPP49321 788 aaPredicted RBP12.55□□□□□ -0.4
CDH8-202ENST00000577228 MYL6P60660 151 aa12.55□□□□□ -0.4
CDH8-202ENST00000577228 AMPD3Q01432 767 aa12.55□□□□□ -0.4
CDH8-202ENST00000577228 LMAN2Q12907 356 aa12.55□□□□□ -0.4
CDH8-202ENST00000577228 E2F4Q16254 413 aa12.55□□□□□ -0.4
CDH8-202ENST00000577228 TRIM61Q5EBN2 209 aa12.55□□□□□ -0.4
CDH8-202ENST00000577228 LY6G5CQ5SRR4 150 aa12.55□□□□□ -0.4
CDH8-202ENST00000577228 EMC10Q5UCC4 262 aa12.55□□□□□ -0.4
CDH8-202ENST00000577228 UNQ6494/PRO21346Q6UXR6 183 aa12.55□□□□□ -0.4
CDH8-202ENST00000577228 ARMCX6Q7L4S7 300 aa12.55□□□□□ -0.4
CDH8-202ENST00000577228 NELFCDQ8IXH7 590 aa12.55□□□□□ -0.4
CDH8-202ENST00000577228 NUP93Q8N1F7 819 aa12.55□□□□□ -0.4
CDH8-202ENST00000577228 XXYLT1Q8NBI6 393 aa12.55□□□□□ -0.4
CDH8-202ENST00000577228 ZNF507Q8TCN5 953 aa12.55□□□□□ -0.4
CDH8-202ENST00000577228 OVCA2Q8WZ82 227 aa12.55□□□□□ -0.4
CDH8-202ENST00000577228 DHX58Q96C10 678 aa12.55□□□□□ -0.4
CDH8-202ENST00000577228 NUSAP1Q9BXS6 441 aaKnown RBP12.55□□□□□ -0.4
CDH8-202ENST00000577228 ZSCAN16Q9H4T2 348 aaPredicted RBP12.55□□□□□ -0.4
CDH8-202ENST00000577228 NXF1Q9UBU9 619 aaKnown RBP12.55□□□□□ -0.4
CDH8-202ENST00000577228 CHD6Q8TD26 2715 aa12.55□□□□□ -0.4
CDH8-202ENST00000577228 UBE4BO95155 1302 aa12.55□□□□□ -0.4
CDH8-202ENST00000577228 A0A0A0MRY4 1105 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 TCRBV21S2A2A0A5A6 115 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 C1QTNF9BB2RNN3 333 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 COCHO43405 550 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 ADAM23O75077 832 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 PHACTR2O75167 634 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 CLSTN1O94985 981 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 STAU1O95793 577 aaKnown RBP12.54□□□□□ -0.4
CDH8-202ENST00000577228 C1QTNF9P0C862 333 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 SPINK2P20155 84 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 ATICP31939 592 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 DPP6P42658 865 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 SNRPFP62306 86 aaKnown RBP12.54□□□□□ -0.4
CDH8-202ENST00000577228 GAD2Q05329 585 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 BYSLQ13895 437 aaKnown RBP12.54□□□□□ -0.4
CDH8-202ENST00000577228 HECTD3Q5T447 861 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 BTBD8Q5XKL5 378 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 CNNM4Q6P4Q7 775 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 SYT12Q8IV01 421 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 TMEFF1Q8IYR6 380 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 PGBD3Q8N328 593 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 LINC00301Q8NCQ3 95 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 DEFB124Q8NES8 71 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 SYAP1Q96A49 352 aaPredicted RBP12.54□□□□□ -0.4
CDH8-202ENST00000577228 OTUB2Q96DC9 234 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 MED10Q9BTT4 135 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 XYLT2Q9H1B5 865 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 SMYD3Q9H7B4 428 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 ZDHHC4Q9NPG8 344 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 MBD1Q9UIS9 605 aaPredicted RBP12.54□□□□□ -0.4
CDH8-202ENST00000577228 SH3BP1Q9Y3L3 701 aa12.54□□□□□ -0.4
CDH8-202ENST00000577228 TBC1D3BA6NDS4 549 aa12.53□□□□□ -0.4
CDH8-202ENST00000577228 SPTLC2O15270 562 aa12.53□□□□□ -0.4
CDH8-202ENST00000577228 HOXC11O43248 304 aaPredicted RBP12.53□□□□□ -0.4
CDH8-202ENST00000577228 PTGER3P43115 390 aa12.53□□□□□ -0.4
CDH8-202ENST00000577228 MAPK8P45983 427 aa12.53□□□□□ -0.4
CDH8-202ENST00000577228 SLC5A3P53794 718 aa12.53□□□□□ -0.4
CDH8-202ENST00000577228 MAP7D1Q3KQU3 841 aa12.53□□□□□ -0.4
CDH8-202ENST00000577228 PREPLQ4J6C6 727 aaPredicted RBP12.53□□□□□ -0.4
CDH8-202ENST00000577228 LYSMD4Q5XG99 296 aa12.53□□□□□ -0.4
CDH8-202ENST00000577228 TRMT11Q7Z4G4 463 aaKnown RBP12.53□□□□□ -0.4
CDH8-202ENST00000577228 FAM35AQ86V20 835 aa12.53□□□□□ -0.4
CDH8-202ENST00000577228 ETFBKMTQ8IXQ9 262 aa12.53□□□□□ -0.4
CDH8-202ENST00000577228 PHTF2Q8N3S3 785 aa12.53□□□□□ -0.4
CDH8-202ENST00000577228 FRMD1Q8N878 549 aa12.53□□□□□ -0.4
CDH8-202ENST00000577228 IQUBQ8NA54 791 aa12.53□□□□□ -0.4
CDH8-202ENST00000577228 SCAMP5Q8TAC9 235 aa12.53□□□□□ -0.4
CDH8-202ENST00000577228 SCFD1Q8WVM8 642 aa12.53□□□□□ -0.4
CDH8-202ENST00000577228 ZNF516Q92618 1163 aa12.53□□□□□ -0.4
CDH8-202ENST00000577228 INTS4Q96HW7 963 aaKnown RBP12.53□□□□□ -0.4
CDH8-202ENST00000577228 ZFRQ96KR1 1074 aaKnown RBP12.53□□□□□ -0.4
CDH8-202ENST00000577228 KCNK16Q96T55 309 aa12.53□□□□□ -0.4
CDH8-202ENST00000577228 C7orf25Q9BPX7 421 aa12.53□□□□□ -0.4
CDH8-202ENST00000577228 ADAM33Q9BZ11 813 aa12.53□□□□□ -0.4
CDH8-202ENST00000577228 DMAP1Q9NPF5 467 aaPredicted RBP12.53□□□□□ -0.4
CDH8-202ENST00000577228 CHORDC1Q9UHD1 332 aaPredicted RBP12.53□□□□□ -0.4
CDH8-202ENST00000577228 ZMIZ1Q9ULJ6 1067 aa12.53□□□□□ -0.4
CDH8-202ENST00000577228 WASF3Q9UPY6 502 aa12.53□□□□□ -0.4
CDH8-202ENST00000577228 ATXN2Q99700 1313 aaKnown RBP12.53□□□□□ -0.4
CDH8-202ENST00000577228 STX6O43752 255 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 EXOC3O60645 756 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 PPP6R2O75170 966 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 TULP3O75386 442 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 TOP3BO95985 862 aaKnown RBP12.52□□□□□ -0.41
CDH8-202ENST00000577228 IRF1P10914 325 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 ENGP17813 658 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 TUBP50607 506 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 BIRC3Q13489 604 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 ANO4Q32M45 955 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 ZNF699Q32M78 642 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 ZNF667Q5HYK9 610 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 SPDYCQ5MJ68 293 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 C10orf76Q5T2E6 689 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms