RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 USP29Q9HBJ7 922 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 GBA2Q9HCG7 927 aaPredicted RBP9.33□□□□□ -0.92
NCBP3-204ENST00000574911 PNPLA8Q9NP80 782 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 NOP53Q9NZM5 478 aaKnown RBP9.33□□□□□ -0.92
NCBP3-204ENST00000574911 KANSL3Q9P2N6 904 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 HAO1Q9UJM8 370 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 KIAA1257Q9ULG3 409 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 C15orf41Q9Y2V0 281 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 ZSWIM8A7E2V4 1837 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 A0A087WZ62 844 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 IQANK1A0A1B0GTG1 560 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 KBTBD13C9JR72 458 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 DPYSL4O14531 572 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 TRAFD1O14545 582 aaPredicted RBP9.33□□□□□ -0.92
NCBP3-204ENST00000574911 MT-ND3P03897 115 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 DHRS4L1P0CG22 281 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 PDGFRAP16234 1089 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 IL4RP24394 825 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 ATP11AP98196 1134 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 SEPT7Q16181 437 aaKnown RBP9.33□□□□□ -0.92
NCBP3-204ENST00000574911 KYAT1Q16773 422 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 C15orf59Q2T9L4 293 aaPredicted RBP9.33□□□□□ -0.92
NCBP3-204ENST00000574911 FYB2Q5VWT5 728 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 OR6B2Q6IFH4 312 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 NLRP9Q7RTR0 991 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 ZC3H18Q86VM9 953 aaKnown RBP9.33□□□□□ -0.92
NCBP3-204ENST00000574911 RTP4Q96DX8 246 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 KLF6Q99612 283 aaPredicted RBP9.33□□□□□ -0.92
NCBP3-204ENST00000574911 FDXACB1Q9BRP7 624 aaPredicted RBP9.33□□□□□ -0.92
NCBP3-204ENST00000574911 CXorf56Q9H5V9 222 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 ELP3Q9H9T3 547 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 PDGFCQ9NRA1 345 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 ERAP1Q9NZ08 941 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 PAK5Q9P286 719 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 TCRBV9S1A1TA0A576 114 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 WDR91A4D1P6 747 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 E5RJQ4 531 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 GOLGA8RI6L899 631 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 CXCL11O14625 94 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 CSDE1O75534 798 aaKnown RBP9.33□□□□□ -0.92
NCBP3-204ENST00000574911 SPAG6O75602 509 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 C1QAP02745 245 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 INSRRP14616 1297 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 ETV4P43268 484 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 RBP5P82980 135 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 ZNF200P98182 395 aaPredicted RBP9.33□□□□□ -0.92
NCBP3-204ENST00000574911 FAAP100Q0VG06 881 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 PTK7Q13308 1070 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 TTLL4Q14679 1199 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 KCTD2Q14681 263 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 TMEM132DQ14C87 1099 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 PDK2Q15119 407 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 CCDC14Q49A88 953 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 PLEKHG4Q58EX7 1191 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 C1orf228Q6PIY5 440 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 CHSY1Q86X52 802 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 PLCD3Q8N3E9 789 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 PLD5Q8N7P1 536 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 USP6NLQ92738 828 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 N4BP2L2Q92802 583 aaPredicted RBP9.33□□□□□ -0.92
NCBP3-204ENST00000574911 PIWIL1Q96J94 861 aaKnown RBP9.33□□□□□ -0.92
NCBP3-204ENST00000574911 SERAC1Q96JX3 654 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 MIS12Q9H081 205 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 C12orf65Q9H3J6 166 aaKnown RBP9.33□□□□□ -0.92
NCBP3-204ENST00000574911 MANSC1Q9H8J5 431 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 NPHS2Q9NP85 383 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 TSPAN16Q9UKR8 245 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 ITGA11Q9UKX5 1188 aa9.33□□□□□ -0.92
NCBP3-204ENST00000574911 H7C0C1 242 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 PIK3R2O00459 728 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 PRPSAP2O60256 369 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 LPXNO60711 386 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 FAM155BO75949 473 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 TROVE2P10155 538 aaKnown RBP eCLIP9.32□□□□□ -0.92
NCBP3-204ENST00000574911 ARF4P18085 180 aaPredicted RBP9.32□□□□□ -0.92
NCBP3-204ENST00000574911 TGM2P21980 687 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 ATP5OP48047 213 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 IGBP1P78318 339 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 ARHGAP1Q07960 439 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 KBTBD12Q3ZCT8 623 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 TAF1BQ53T94 588 aaPredicted RBP9.32□□□□□ -0.92
NCBP3-204ENST00000574911 DPH6Q7L8W6 267 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 TTC39CQ8N584 583 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 PQLC3Q8N755 202 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 GPATCH11Q8N954 259 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 RFWD2Q8NHY2 731 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 PTPRN2Q92932 1015 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 FAF2Q96CS3 445 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 OTUD5Q96G74 571 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 APOPT1Q96IL0 206 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 FRMD8Q9BZ67 464 aaPredicted RBP9.32□□□□□ -0.92
NCBP3-204ENST00000574911 SAR1AQ9NR31 198 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 C2CD2Q9Y426 696 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 TTLL3Q9Y4R7 772 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 LOC102724159A0A0B4J2E5 919 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 BCLAF3A2AJT9 711 aaKnown RBP9.32□□□□□ -0.92
NCBP3-204ENST00000574911 ADM5C9JUS6 153 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 MAGEA6P43360 314 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 CCNG1P51959 295 aa9.32□□□□□ -0.92
NCBP3-204ENST00000574911 YWHAZP63104 245 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms