RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 CETN3O15182 167 aa18.46■□□□□ 0.55
SMG6-214ENST00000573827 SLC16A3O15427 465 aaKnown RBP18.46■□□□□ 0.55
SMG6-214ENST00000573827 COCHO43405 550 aa18.46■□□□□ 0.55
SMG6-214ENST00000573827 GADD45BO75293 160 aaPredicted RBP18.46■□□□□ 0.55
SMG6-214ENST00000573827 OPRD1P41143 372 aa18.46■□□□□ 0.55
SMG6-214ENST00000573827 IFNAR2P48551 515 aa18.46■□□□□ 0.55
SMG6-214ENST00000573827 MXI1P50539 228 aa18.46■□□□□ 0.55
SMG6-214ENST00000573827 TUBP50607 506 aa18.46■□□□□ 0.55
SMG6-214ENST00000573827 CBWD6Q4V339 395 aa18.46■□□□□ 0.55
SMG6-214ENST00000573827 CBWD3Q5JTY5 395 aa18.46■□□□□ 0.55
SMG6-214ENST00000573827 CBWD5Q5RIA9 395 aa18.46■□□□□ 0.55
SMG6-214ENST00000573827 PDZD8Q8NEN9 1154 aa18.46■□□□□ 0.55
SMG6-214ENST00000573827 RUBCNQ92622 972 aa18.46■□□□□ 0.55
SMG6-214ENST00000573827 CCDC34Q96HJ3 373 aa18.46■□□□□ 0.55
SMG6-214ENST00000573827 FAXDC2Q96IV6 333 aa18.46■□□□□ 0.55
SMG6-214ENST00000573827 ARID3AQ99856 593 aa18.46■□□□□ 0.55
SMG6-214ENST00000573827 P2RY13Q9BPV8 354 aa18.46■□□□□ 0.55
SMG6-214ENST00000573827 MED10Q9BTT4 135 aa18.46■□□□□ 0.55
SMG6-214ENST00000573827 MMRN2Q9H8L6 949 aa18.46■□□□□ 0.55
SMG6-214ENST00000573827 SMPD4Q9NXE4 827 aa18.46■□□□□ 0.55
SMG6-214ENST00000573827 GMIPQ9P107 970 aa18.46■□□□□ 0.55
SMG6-214ENST00000573827 CHORDC1Q9UHD1 332 aaPredicted RBP18.46■□□□□ 0.55
SMG6-214ENST00000573827 SMG5Q9UPR3 1016 aaKnown RBP18.46■□□□□ 0.55
SMG6-214ENST00000573827 COQ4Q9Y3A0 265 aa18.46■□□□□ 0.55
SMG6-214ENST00000573827 MYOFQ9NZM1 2061 aa18.45■□□□□ 0.54
SMG6-214ENST00000573827 GOLGA6L4A6NEF3 574 aa18.45■□□□□ 0.54
SMG6-214ENST00000573827 CHURC1-FNTBB4DL54 471 aa18.45■□□□□ 0.54
SMG6-214ENST00000573827 GREM1O60565 184 aa18.45■□□□□ 0.54
SMG6-214ENST00000573827 SMC2O95347 1197 aa18.45■□□□□ 0.54
SMG6-214ENST00000573827 CYP17A1P05093 508 aa18.45■□□□□ 0.54
SMG6-214ENST00000573827 TGM1P22735 817 aa18.45■□□□□ 0.54
SMG6-214ENST00000573827 NRLP54845 237 aa18.45■□□□□ 0.54
SMG6-214ENST00000573827 MAP3K7CLP57077 242 aa18.45■□□□□ 0.54
SMG6-214ENST00000573827 GRSF1Q12849 480 aaKnown RBP eCLIP18.45■□□□□ 0.54
SMG6-214ENST00000573827 IFRD2Q12894 506 aaPredicted RBP18.45■□□□□ 0.54
SMG6-214ENST00000573827 FILIP1Q7Z7B0 1213 aa18.45■□□□□ 0.54
SMG6-214ENST00000573827 ADGRG2Q8IZP9 1017 aa18.45■□□□□ 0.54
SMG6-214ENST00000573827 SMARCE1Q969G3 411 aa18.45■□□□□ 0.54
SMG6-214ENST00000573827 WBP2Q969T9 261 aa18.45■□□□□ 0.54
SMG6-214ENST00000573827 SLC35C1Q96A29 364 aa18.45■□□□□ 0.54
SMG6-214ENST00000573827 DUSP9Q99956 384 aaKnown RBP18.45■□□□□ 0.54
SMG6-214ENST00000573827 NT5C1AQ9BXI3 368 aa18.45■□□□□ 0.54
SMG6-214ENST00000573827 CCSER2Q9H7U1 834 aa18.45■□□□□ 0.54
SMG6-214ENST00000573827 POLR3BQ9NW08 1133 aaPredicted RBP18.45■□□□□ 0.54
SMG6-214ENST00000573827 MAN1B1Q9UKM7 699 aa18.45■□□□□ 0.54
SMG6-214ENST00000573827 MYO16Q9Y6X6 1858 aa18.45■□□□□ 0.54
SMG6-214ENST00000573827 ANTXRLA6NF34 631 aa18.44■□□□□ 0.54
SMG6-214ENST00000573827 HRO43593 1189 aa18.44■□□□□ 0.54
SMG6-214ENST00000573827 EPB41P11171 864 aaKnown RBP18.44■□□□□ 0.54
SMG6-214ENST00000573827 CD58P19256 250 aa18.44■□□□□ 0.54
SMG6-214ENST00000573827 DRD1P21728 446 aa18.44■□□□□ 0.54
SMG6-214ENST00000573827 FNTBP49356 437 aa18.44■□□□□ 0.54
SMG6-214ENST00000573827 FKBP3Q00688 224 aaKnown RBP18.44■□□□□ 0.54
SMG6-214ENST00000573827 LRRC63Q05C16 580 aa18.44■□□□□ 0.54
SMG6-214ENST00000573827 MESP2Q0VG99 397 aa18.44■□□□□ 0.54
SMG6-214ENST00000573827 FBXL13Q8NEE6 735 aa18.44■□□□□ 0.54
SMG6-214ENST00000573827 TATDN2Q93075 761 aa18.44■□□□□ 0.54
SMG6-214ENST00000573827 IMPG2Q9BZV3 1241 aa18.44■□□□□ 0.54
SMG6-214ENST00000573827 OSER1Q9NX31 292 aa18.44■□□□□ 0.54
SMG6-214ENST00000573827 RAB20Q9NX57 234 aa18.44■□□□□ 0.54
SMG6-214ENST00000573827 CFAP97Q9P2B7 532 aa18.44■□□□□ 0.54
SMG6-214ENST00000573827 KIAA1549LQ6ZVL6 1849 aa18.44■□□□□ 0.54
SMG6-214ENST00000573827 MYH10P35580 1976 aa18.43■□□□□ 0.54
SMG6-214ENST00000573827 PPP1R3GB7ZBB8 358 aa18.43■□□□□ 0.54
SMG6-214ENST00000573827 SCAMP3O14828 347 aaKnown RBP18.43■□□□□ 0.54
SMG6-214ENST00000573827 RNF40O75150 1001 aa18.43■□□□□ 0.54
SMG6-214ENST00000573827 CLSTN1O94985 981 aa18.43■□□□□ 0.54
SMG6-214ENST00000573827 ABL1P00519 1130 aa18.43■□□□□ 0.54
SMG6-214ENST00000573827 FAM200BP0CF97 657 aa18.43■□□□□ 0.54
SMG6-214ENST00000573827 ADORA2BP29275 332 aa18.43■□□□□ 0.54
SMG6-214ENST00000573827 AMPD2Q01433 879 aa18.43■□□□□ 0.54
SMG6-214ENST00000573827 PPP2R5DQ14738 602 aa18.43■□□□□ 0.54
SMG6-214ENST00000573827 HECTD3Q5T447 861 aa18.43■□□□□ 0.54
SMG6-214ENST00000573827 RHBDF2Q6PJF5 856 aa18.43■□□□□ 0.54
SMG6-214ENST00000573827 UBR7Q8N806 425 aa18.43■□□□□ 0.54
SMG6-214ENST00000573827 SLC4A11Q8NBS3 891 aa18.43■□□□□ 0.54
SMG6-214ENST00000573827 TTC16Q8NEE8 873 aa18.43■□□□□ 0.54
SMG6-214ENST00000573827 CD101Q93033 1021 aa18.43■□□□□ 0.54
SMG6-214ENST00000573827 CYFIP2Q96F07 1278 aa18.43■□□□□ 0.54
SMG6-214ENST00000573827 NMUR1Q9HB89 426 aa18.43■□□□□ 0.54
SMG6-214ENST00000573827 PNPLA8Q9NP80 782 aa18.43■□□□□ 0.54
SMG6-214ENST00000573827 CISHQ9NSE2 258 aa18.43■□□□□ 0.54
SMG6-214ENST00000573827 SCML2Q9UQR0 700 aa18.43■□□□□ 0.54
SMG6-214ENST00000573827 SPAG17Q6Q759 2223 aa18.42■□□□□ 0.54
SMG6-214ENST00000573827 NFATC1O95644 943 aa18.42■□□□□ 0.54
SMG6-214ENST00000573827 MBL2P11226 248 aaPredicted RBP18.42■□□□□ 0.54
SMG6-214ENST00000573827 RAD23BP54727 409 aa18.42■□□□□ 0.54
SMG6-214ENST00000573827 SRSF5Q13243 272 aaKnown RBP18.42■□□□□ 0.54
SMG6-214ENST00000573827 MORC3Q14149 939 aa18.42■□□□□ 0.54
SMG6-214ENST00000573827 DHCR24Q15392 516 aa18.42■□□□□ 0.54
SMG6-214ENST00000573827 PPP1R26Q5T8A7 1209 aaPredicted RBP18.42■□□□□ 0.54
SMG6-214ENST00000573827 TTI2Q6NXR4 508 aa18.42■□□□□ 0.54
SMG6-214ENST00000573827 FOXR2Q6PJQ5 311 aa18.42■□□□□ 0.54
SMG6-214ENST00000573827 LONP2Q86WA8 852 aa18.42■□□□□ 0.54
SMG6-214ENST00000573827 GTPBP4Q9BZE4 634 aaKnown RBP18.42■□□□□ 0.54
SMG6-214ENST00000573827 CYLDQ9NQC7 956 aa18.42■□□□□ 0.54
SMG6-214ENST00000573827 CIZ1Q9ULV3 898 aaPredicted RBP18.42■□□□□ 0.54
SMG6-214ENST00000573827 USP3Q9Y6I4 520 aa18.42■□□□□ 0.54
SMG6-214ENST00000573827 CNOT1A5YKK6 2376 aaKnown RBP18.42■□□□□ 0.54
SMG6-214ENST00000573827 E2F8A0AVK6 867 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms