RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 FAM35AQ86V20 835 aa9.63□□□□□ -0.87
NDE1-207ENST00000573203 ZSCAN30Q86W11 494 aa9.63□□□□□ -0.87
NDE1-207ENST00000573203 C1orf210Q8IVY1 113 aa9.63□□□□□ -0.87
NDE1-207ENST00000573203 ZC3H3Q8IXZ2 948 aaKnown RBP9.63□□□□□ -0.87
NDE1-207ENST00000573203 NUP93Q8N1F7 819 aa9.63□□□□□ -0.87
NDE1-207ENST00000573203 CRYBG2Q8N1P7 616 aa9.63□□□□□ -0.87
NDE1-207ENST00000573203 FBXL13Q8NEE6 735 aa9.63□□□□□ -0.87
NDE1-207ENST00000573203 TTC16Q8NEE8 873 aa9.63□□□□□ -0.87
NDE1-207ENST00000573203 TTC8Q8TAM2 541 aa9.63□□□□□ -0.87
NDE1-207ENST00000573203 FAM3CQ92520 227 aa9.63□□□□□ -0.87
NDE1-207ENST00000573203 SMARCD1Q96GM5 515 aa9.63□□□□□ -0.87
NDE1-207ENST00000573203 MSANTD3Q96H12 275 aa9.63□□□□□ -0.87
NDE1-207ENST00000573203 TTLL2Q9BWV7 592 aa9.63□□□□□ -0.87
NDE1-207ENST00000573203 DNAI2Q9GZS0 605 aa9.63□□□□□ -0.87
NDE1-207ENST00000573203 NIF3L1Q9GZT8 377 aa9.63□□□□□ -0.87
NDE1-207ENST00000573203 C8orf33Q9H7E9 229 aaPredicted RBP9.63□□□□□ -0.87
NDE1-207ENST00000573203 CYP3A43Q9HB55 503 aa9.63□□□□□ -0.87
NDE1-207ENST00000573203 APOBEC3GQ9HC16 384 aaKnown RBP9.63□□□□□ -0.87
NDE1-207ENST00000573203 DMAP1Q9NPF5 467 aaPredicted RBP9.63□□□□□ -0.87
NDE1-207ENST00000573203 GKN1Q9NS71 199 aa9.63□□□□□ -0.87
NDE1-207ENST00000573203 FAM49BQ9NUQ9 324 aa9.63□□□□□ -0.87
NDE1-207ENST00000573203 SPATA6Q9NWH7 488 aaPredicted RBP9.63□□□□□ -0.87
NDE1-207ENST00000573203 HMGXB4Q9UGU5 601 aa9.63□□□□□ -0.87
NDE1-207ENST00000573203 ARMCX3Q9UH62 379 aaPredicted RBP9.63□□□□□ -0.87
NDE1-207ENST00000573203 CCL26Q9Y258 94 aa9.63□□□□□ -0.87
NDE1-207ENST00000573203 PATJQ8NI35 1801 aa9.63□□□□□ -0.87
NDE1-207ENST00000573203 CACNA1HO95180 2353 aa9.63□□□□□ -0.87
NDE1-207ENST00000573203 GOLGA6L6A8MZA4 724 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 AP5Z1O43299 807 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 RTN3O95197 1032 aaPredicted RBP9.62□□□□□ -0.87
NDE1-207ENST00000573203 ABL1P00519 1130 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 CCDC130P13994 396 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 HDCP19113 662 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 CD58P19256 250 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 YWHAQP27348 245 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 SOX9P48436 509 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 PPP3CCP48454 512 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 PDE6CP51160 858 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 ZNF75DP51815 510 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 MLLT6P55198 1093 aaPredicted RBP9.62□□□□□ -0.87
NDE1-207ENST00000573203 MCCD1P59942 119 aaPredicted RBP9.62□□□□□ -0.87
NDE1-207ENST00000573203 INCA1Q0VD86 236 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 TAF10Q12962 218 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 NCAPHQ15003 741 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 ITPRIPL2Q3MIP1 535 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 DPCR1Q3MIW9 517 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 CCDC40Q4G0X9 1142 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 C1orf228Q6PIY5 440 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 NUDT18Q6ZVK8 323 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 PAQR9Q6ZVX9 377 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 ARL14EPQ8N8R7 260 aaPredicted RBP9.62□□□□□ -0.87
NDE1-207ENST00000573203 C12orf29Q8N999 325 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 ENOX1Q8TC92 643 aaKnown RBP9.62□□□□□ -0.87
NDE1-207ENST00000573203 SLC2A14Q8TDB8 520 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 NELFBQ8WX92 580 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 SEMA4DQ92854 862 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 FBXO32Q969P5 355 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 CEP63Q96MT8 703 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 SLITRK1Q96PX8 696 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 SLC22A12Q96S37 553 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 CYP2S1Q96SQ9 504 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 KCNK16Q96T55 309 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 NT5C1AQ9BXI3 368 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 METTL14Q9HCE5 456 aaKnown RBP9.62□□□□□ -0.87
NDE1-207ENST00000573203 KRT82Q9NSB4 513 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 TMEM30AQ9NV96 361 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 RAB20Q9NX57 234 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 GTSE1Q9NYZ3 720 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 TSR3Q9UJK0 312 aaKnown RBP9.62□□□□□ -0.87
NDE1-207ENST00000573203 CTNND2Q9UQB3 1225 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 F5P12259 2224 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 MYO16Q9Y6X6 1858 aa9.62□□□□□ -0.87
NDE1-207ENST00000573203 BICDL2A1A5D9 508 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 ZNF840PA6NDX5 716 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 SHISA7A6NL88 538 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 SPECC1L-ADORA2AF8WAN1 911 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 LAMTOR5O43504 91 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 CILPO75339 1184 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 FAM200BP0CF97 657 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 PFKLP17858 780 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 BMP6P22004 513 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 ADORA2BP29275 332 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 CTHP32929 405 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 RPS9P46781 194 aaKnown RBP9.61□□□□□ -0.87
NDE1-207ENST00000573203 SLC5A3P53794 718 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 MAP3K7CLP57077 242 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 MYL5Q02045 173 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 TNK2Q07912 1038 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 RUNX3Q13761 415 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 MTF1Q14872 753 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 CBWD6Q4V339 395 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 CBWD3Q5JTY5 395 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 CBWD5Q5RIA9 395 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 TRIM68Q6AZZ1 485 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 FILIP1Q7Z7B0 1213 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 RALGPS2Q86X27 583 aaPredicted RBP9.61□□□□□ -0.87
NDE1-207ENST00000573203 FUKQ8N0W3 1084 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 PDZD8Q8NEN9 1154 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 SH3RF2Q8TEC5 729 aa9.61□□□□□ -0.87
NDE1-207ENST00000573203 CLDN23Q96B33 292 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms