RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 BPIFB1Q8TDL5 484 aa12.55□□□□□ -0.4
NDE1-206ENST00000572967 CLDN23Q96B33 292 aa12.55□□□□□ -0.4
NDE1-206ENST00000572967 LRRC3BQ96PB8 259 aa12.55□□□□□ -0.4
NDE1-206ENST00000572967 ACBD6Q9BR61 282 aa12.55□□□□□ -0.4
NDE1-206ENST00000572967 GANQ9H2C0 597 aa12.55□□□□□ -0.4
NDE1-206ENST00000572967 CHRDQ9H2X0 955 aa12.55□□□□□ -0.4
NDE1-206ENST00000572967 SNX25Q9H3E2 840 aa12.55□□□□□ -0.4
NDE1-206ENST00000572967 TRPC7Q9HCX4 862 aa12.55□□□□□ -0.4
NDE1-206ENST00000572967 PRMT8Q9NR22 394 aaPredicted RBP12.55□□□□□ -0.4
NDE1-206ENST00000572967 RBM12Q9NTZ6 932 aaKnown RBP12.55□□□□□ -0.4
NDE1-206ENST00000572967 GTSE1Q9NYZ3 720 aa12.55□□□□□ -0.4
NDE1-206ENST00000572967 CAPN11Q9UMQ6 739 aa12.55□□□□□ -0.4
NDE1-206ENST00000572967 CCL26Q9Y258 94 aa12.55□□□□□ -0.4
NDE1-206ENST00000572967 MYH10P35580 1976 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 MYBPHLA2RUH7 354 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 AKR1B15C9JRZ8 316 aaPredicted RBP12.54□□□□□ -0.4
NDE1-206ENST00000572967 SPECC1L-ADORA2AF8WAN1 911 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 MAN2B1O00754 1011 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 PTMAP06454 111 aaKnown RBP12.54□□□□□ -0.4
NDE1-206ENST00000572967 FERP16591 822 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 CTHP32929 405 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 AVPR1AP37288 418 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 ASPAP45381 313 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 FZD5Q13467 585 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 ARHGAP29Q52LW3 1261 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 TXNDC8Q6A555 127 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 TXNDC11Q6PKC3 985 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 VPS36Q86VN1 386 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 CMTM8Q8IZV2 173 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 RIN3Q8TB24 985 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 MRPS31Q92665 395 aaKnown RBP12.54□□□□□ -0.4
NDE1-206ENST00000572967 SYN2Q92777 582 aaPredicted RBP12.54□□□□□ -0.4
NDE1-206ENST00000572967 TNIP3Q96KP6 325 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 MRPL45Q9BRJ2 306 aaKnown RBP12.54□□□□□ -0.4
NDE1-206ENST00000572967 APOBEC3GQ9HC16 384 aaKnown RBP12.54□□□□□ -0.4
NDE1-206ENST00000572967 ABCB6Q9NP58 842 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 SIX2Q9NPC8 291 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 CRTAC1Q9NQ79 661 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 TRPV5Q9NQA5 729 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 FBXO4Q9UKT5 387 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 FHOD1Q9Y613 1164 aa12.54□□□□□ -0.4
NDE1-206ENST00000572967 F8VZ95 297 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 GABRDO14764 452 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 AP5Z1O43299 807 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 MFAP3LO75121 409 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 NOL4O94818 638 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 F11P03951 625 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 GYPCP04921 128 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 PDGFRBP09619 1106 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 KRT5P13647 590 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 WARSP23381 471 aaKnown RBP12.53□□□□□ -0.4
NDE1-206ENST00000572967 LMO2P25791 158 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 RPL10AP62906 217 aaKnown RBP12.53□□□□□ -0.4
NDE1-206ENST00000572967 CYP27A1Q02318 531 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 INCA1Q0VD86 236 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 PON2Q15165 354 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 MAPRE1Q15691 268 aaKnown RBP12.53□□□□□ -0.4
NDE1-206ENST00000572967 ARHGAP44Q17R89 818 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 MDH1BQ5I0G3 518 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 SFMBT2Q5VUG0 894 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 TRIM68Q6AZZ1 485 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 SPOPLQ6IQ16 392 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 C4orf50Q6ZRC1 276 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 Q6ZS52 159 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 RRAGAQ7L523 313 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 ARHGEF19Q8IW93 802 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 ZNF687Q8N1G0 1237 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 SHC3Q92529 594 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 USP13Q92995 863 aaPredicted RBP12.53□□□□□ -0.4
NDE1-206ENST00000572967 ELMO3Q96BJ8 720 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 NELL2Q99435 816 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 SLC46A2Q9BY10 475 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 TTYH3Q9C0H2 523 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 DPEP3Q9H4B8 488 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 NLRC4Q9NPP4 1024 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 CISHQ9NSE2 258 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 OBP2AQ9NY56 170 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 UXTQ9UBK9 157 aaPredicted RBP12.53□□□□□ -0.4
NDE1-206ENST00000572967 CDH9Q9ULB4 789 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 KIAA1257Q9ULG3 409 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 NME7Q9Y5B8 376 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 PCDHB4Q9Y5E5 795 aa12.53□□□□□ -0.4
NDE1-206ENST00000572967 BZW2Q9Y6E2 419 aaKnown RBP12.53□□□□□ -0.4
NDE1-206ENST00000572967 A8MXQ7 604 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 PAEPP09466 180 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 CD58P19256 250 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 BDNFP23560 247 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 DDX6P26196 483 aaKnown RBP eCLIP12.52□□□□□ -0.41
NDE1-206ENST00000572967 ANXA13P27216 316 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 CASP14P31944 242 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 KRT9P35527 623 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 SOX5P35711 763 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 USP8P40818 1118 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 RAP1GAPP47736 663 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 KLK7P49862 253 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 PDE6CP51160 858 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 SATB1Q01826 763 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 PTK2Q05397 1052 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 IFRD2Q12894 506 aaPredicted RBP12.52□□□□□ -0.41
NDE1-206ENST00000572967 DRAP1Q14919 205 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms