RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 SCML2Q9UQR0 700 aa21.81■■□□□ 1.08
CHMP6-204ENST00000572778 MTF2Q9Y483 593 aaPredicted RBP21.81■■□□□ 1.08
CHMP6-204ENST00000572778 CPQQ9Y646 472 aa21.81■■□□□ 1.08
CHMP6-204ENST00000572778 GTPBP10A4D1E9 387 aaKnown RBP21.8■■□□□ 1.08
CHMP6-204ENST00000572778 LEFTY2O00292 366 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 CYP26A1O43174 497 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 COCHO43405 550 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 OLFM2O95897 454 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 ZDHHC11BP0C7U3 371 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 KRT5P13647 590 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 TARSP26639 723 aaKnown RBP21.8■■□□□ 1.08
CHMP6-204ENST00000572778 PGFP49763 221 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 KIF11P52732 1056 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 NUBP1P53384 320 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 BCAT1P54687 386 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 MFAP3P55082 362 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 APBA1Q02410 837 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 PDE4CQ08493 712 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 USP4Q13107 963 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 TCP11X2Q5H9J9 407 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 SNX30Q5VWJ9 437 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 CAVIN1Q6NZI2 390 aaKnown RBP21.8■■□□□ 1.08
CHMP6-204ENST00000572778 PIGZQ86VD9 579 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 PRSS33Q8NF86 280 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 UBA3Q8TBC4 463 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 TFAP2BQ92481 460 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 FAM3CQ92520 227 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 NELL2Q99435 816 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 FAM83CQ9BQN1 747 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 UBXN6Q9BZV1 441 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 NACA2Q9H009 215 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 EBF3Q9H4W6 596 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 CCSER2Q9H7U1 834 aa21.8■■□□□ 1.08
CHMP6-204ENST00000572778 DUS2Q9NX74 493 aaKnown RBP21.8■■□□□ 1.08
CHMP6-204ENST00000572778 NDRG2Q9UN36 371 aaKnown RBP21.8■■□□□ 1.08
CHMP6-204ENST00000572778 COL4A3Q01955 1670 aa21.79■■□□□ 1.08
CHMP6-204ENST00000572778 O00370 1275 aa21.79■■□□□ 1.08
CHMP6-204ENST00000572778 CALCAP01258 141 aa21.79■■□□□ 1.08
CHMP6-204ENST00000572778 GLULP15104 373 aa21.79■■□□□ 1.08
CHMP6-204ENST00000572778 ARSAP15289 507 aa21.79■■□□□ 1.08
CHMP6-204ENST00000572778 BRD2P25440 801 aaKnown RBP21.79■■□□□ 1.08
CHMP6-204ENST00000572778 EEF1GP26641 437 aaKnown RBP21.79■■□□□ 1.08
CHMP6-204ENST00000572778 PON1P27169 355 aa21.79■■□□□ 1.08
CHMP6-204ENST00000572778 IFNAR2P48551 515 aa21.79■■□□□ 1.08
CHMP6-204ENST00000572778 ZXDBP98169 803 aa21.79■■□□□ 1.08
CHMP6-204ENST00000572778 RUNX3Q13761 415 aa21.79■■□□□ 1.08
CHMP6-204ENST00000572778 PDGFRLQ15198 375 aa21.79■■□□□ 1.08
CHMP6-204ENST00000572778 ARHGAP44Q17R89 818 aa21.79■■□□□ 1.08
CHMP6-204ENST00000572778 ITPRIPL2Q3MIP1 535 aa21.79■■□□□ 1.08
CHMP6-204ENST00000572778 MIIPQ5JXC2 388 aa21.79■■□□□ 1.08
CHMP6-204ENST00000572778 ENOSF1Q7L5Y1 443 aa21.79■■□□□ 1.08
CHMP6-204ENST00000572778 CCDC105Q8IYK2 499 aa21.79■■□□□ 1.08
CHMP6-204ENST00000572778 DTWD2Q8NBA8 298 aa21.79■■□□□ 1.08
CHMP6-204ENST00000572778 OSCP1Q8WVF1 389 aa21.79■■□□□ 1.08
CHMP6-204ENST00000572778 FAM81BQ96LP2 452 aa21.79■■□□□ 1.08
CHMP6-204ENST00000572778 APEX2Q9UBZ4 518 aa21.79■■□□□ 1.08
CHMP6-204ENST00000572778 WNT6Q9Y6F9 365 aa21.79■■□□□ 1.08
CHMP6-204ENST00000572778 NUP210Q8TEM1 1887 aaPredicted RBP21.79■■□□□ 1.08
CHMP6-204ENST00000572778 A0A1W2PQH9 124 aa21.78■■□□□ 1.08
CHMP6-204ENST00000572778 SHISA7A6NL88 538 aa21.78■■□□□ 1.08
CHMP6-204ENST00000572778 SPECC1L-ADORA2AF8WAN1 911 aa21.78■■□□□ 1.08
CHMP6-204ENST00000572778 TULP2O00295 520 aa21.78■■□□□ 1.08
CHMP6-204ENST00000572778 XPO1O14980 1071 aaKnown RBP21.78■■□□□ 1.08
CHMP6-204ENST00000572778 GALR2O43603 387 aaPredicted RBP21.78■■□□□ 1.08
CHMP6-204ENST00000572778 TLR5O60602 858 aa21.78■■□□□ 1.08
CHMP6-204ENST00000572778 TCF3P15923 654 aa21.78■■□□□ 1.08
CHMP6-204ENST00000572778 TUBP50607 506 aa21.78■■□□□ 1.08
CHMP6-204ENST00000572778 MLLT6P55198 1093 aaPredicted RBP21.78■■□□□ 1.08
CHMP6-204ENST00000572778 BST2Q10589 180 aaKnown RBP21.78■■□□□ 1.08
CHMP6-204ENST00000572778 CNGA2Q16280 664 aa21.78■■□□□ 1.08
CHMP6-204ENST00000572778 LCLAT1Q6UWP7 414 aa21.78■■□□□ 1.08
CHMP6-204ENST00000572778 MSANTD3Q96H12 275 aa21.78■■□□□ 1.08
CHMP6-204ENST00000572778 OSBPL6Q9BZF3 934 aa21.78■■□□□ 1.08
CHMP6-204ENST00000572778 HPS4Q9NQG7 708 aa21.78■■□□□ 1.08
CHMP6-204ENST00000572778 TAB2Q9NYJ8 693 aa21.78■■□□□ 1.08
CHMP6-204ENST00000572778 ARIH1Q9Y4X5 557 aaPredicted RBP21.78■■□□□ 1.08
CHMP6-204ENST00000572778 USP3Q9Y6I4 520 aa21.78■■□□□ 1.08
CHMP6-204ENST00000572778 GREB1Q4ZG55 1949 aa21.77■■□□□ 1.08
CHMP6-204ENST00000572778 NCAM2O15394 837 aa21.77■■□□□ 1.08
CHMP6-204ENST00000572778 USP8P40818 1118 aa21.77■■□□□ 1.08
CHMP6-204ENST00000572778 ZNF132P52740 706 aa21.77■■□□□ 1.08
CHMP6-204ENST00000572778 TYRO3Q06418 890 aa21.77■■□□□ 1.08
CHMP6-204ENST00000572778 STILQ15468 1287 aa21.77■■□□□ 1.08
CHMP6-204ENST00000572778 CCDC186Q7Z3E2 898 aa21.77■■□□□ 1.08
CHMP6-204ENST00000572778 RALGPS2Q86X27 583 aaPredicted RBP21.77■■□□□ 1.08
CHMP6-204ENST00000572778 ZSWIM1Q9BR11 485 aa21.77■■□□□ 1.08
CHMP6-204ENST00000572778 NMUR1Q9HB89 426 aa21.77■■□□□ 1.08
CHMP6-204ENST00000572778 LRRC4Q9HBW1 653 aa21.77■■□□□ 1.08
CHMP6-204ENST00000572778 FANCLQ9NW38 375 aa21.77■■□□□ 1.08
CHMP6-204ENST00000572778 OSER1Q9NX31 292 aa21.77■■□□□ 1.08
CHMP6-204ENST00000572778 CFAP97Q9P2B7 532 aa21.77■■□□□ 1.08
CHMP6-204ENST00000572778 NAGPAQ9UK23 515 aa21.77■■□□□ 1.08
CHMP6-204ENST00000572778 ZDBF2Q9HCK1 2354 aa21.77■■□□□ 1.08
CHMP6-204ENST00000572778 OBSL1O75147 1896 aa21.77■■□□□ 1.08
CHMP6-204ENST00000572778 TBX18O95935 607 aa21.76■■□□□ 1.07
CHMP6-204ENST00000572778 SETSIPP0DME0 302 aa21.76■■□□□ 1.07
CHMP6-204ENST00000572778 CTHP32929 405 aa21.76■■□□□ 1.07
CHMP6-204ENST00000572778 TKTL1P51854 596 aa21.76■■□□□ 1.07
CHMP6-204ENST00000572778 PTPN5P54829 565 aa21.76■■□□□ 1.07
CHMP6-204ENST00000572778 MYL5Q02045 173 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms