RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 TRIM21P19474 475 aaKnown RBP16.5■□□□□ 0.23
TSR1-202ENST00000571806 CLDN10P78369 228 aa16.5■□□□□ 0.23
TSR1-202ENST00000571806 ZNF667Q5HYK9 610 aa16.5■□□□□ 0.23
TSR1-202ENST00000571806 HECTD3Q5T447 861 aa16.5■□□□□ 0.23
TSR1-202ENST00000571806 CYP2U1Q7Z449 544 aa16.5■□□□□ 0.23
TSR1-202ENST00000571806 CCDC33Q8N5R6 958 aa16.5■□□□□ 0.23
TSR1-202ENST00000571806 MDGA1Q8NFP4 955 aa16.5■□□□□ 0.23
TSR1-202ENST00000571806 OLIG1Q8TAK6 271 aa16.5■□□□□ 0.23
TSR1-202ENST00000571806 SMARCD1Q96GM5 515 aa16.5■□□□□ 0.23
TSR1-202ENST00000571806 TPSD1Q9BZJ3 242 aa16.5■□□□□ 0.23
TSR1-202ENST00000571806 DPEP3Q9H4B8 488 aa16.5■□□□□ 0.23
TSR1-202ENST00000571806 DMAP1Q9NPF5 467 aaPredicted RBP16.5■□□□□ 0.23
TSR1-202ENST00000571806 ARHGEF4Q9NR80 690 aa16.5■□□□□ 0.23
TSR1-202ENST00000571806 IL37Q9NZH6 218 aa16.5■□□□□ 0.23
TSR1-202ENST00000571806 NME7Q9Y5B8 376 aa16.5■□□□□ 0.23
TSR1-202ENST00000571806 LNP1A1A4G5 178 aa16.49■□□□□ 0.23
TSR1-202ENST00000571806 CACNA2D1P54289 1103 aa16.49■□□□□ 0.23
TSR1-202ENST00000571806 IFRD2Q12894 506 aaPredicted RBP16.49■□□□□ 0.23
TSR1-202ENST00000571806 BIRC3Q13489 604 aa16.49■□□□□ 0.23
TSR1-202ENST00000571806 ZNF699Q32M78 642 aa16.49■□□□□ 0.23
TSR1-202ENST00000571806 TCEAL6Q6IPX3 200 aa16.49■□□□□ 0.23
TSR1-202ENST00000571806 LPCAT2Q7L5N7 544 aa16.49■□□□□ 0.23
TSR1-202ENST00000571806 ALLCQ8N6M5 410 aa16.49■□□□□ 0.23
TSR1-202ENST00000571806 IL17RCQ8NAC3 791 aa16.49■□□□□ 0.23
TSR1-202ENST00000571806 PARD3BQ8TEW8 1205 aa16.49■□□□□ 0.23
TSR1-202ENST00000571806 TCEAL3Q969E4 200 aa16.49■□□□□ 0.23
TSR1-202ENST00000571806 MED10Q9BTT4 135 aa16.49■□□□□ 0.23
TSR1-202ENST00000571806 FBXO44Q9H4M3 255 aa16.49■□□□□ 0.23
TSR1-202ENST00000571806 SLC39A2Q9NP94 309 aa16.49■□□□□ 0.23
TSR1-202ENST00000571806 TMEM9BQ9NQ34 198 aa16.49■□□□□ 0.23
TSR1-202ENST00000571806 FOXD4L1Q9NU39 408 aa16.49■□□□□ 0.23
TSR1-202ENST00000571806 EVLQ9UI08 416 aaPredicted RBP16.49■□□□□ 0.23
TSR1-202ENST00000571806 SH3BP1Q9Y3L3 701 aa16.49■□□□□ 0.23
TSR1-202ENST00000571806 TPRP12270 2363 aaKnown RBP16.48■□□□□ 0.23
TSR1-202ENST00000571806 FAM92AA1XBS5 289 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 C4orf47A7E2U8 309 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 CLDN5O00501 218 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 MAP3K13O43283 966 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 COCHO43405 550 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 KLF8O95600 359 aaPredicted RBP16.48■□□□□ 0.23
TSR1-202ENST00000571806 RPN1P04843 607 aaKnown RBP16.48■□□□□ 0.23
TSR1-202ENST00000571806 CEACAM1P13688 526 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 TIE1P35590 1138 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 P2RY2P41231 377 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 KIR2DL1P43626 348 aaPredicted RBP16.48■□□□□ 0.23
TSR1-202ENST00000571806 SLC6A11P48066 632 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 LMAN2Q12907 356 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 NCOA4Q13772 614 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 SGSM1Q2NKQ1 1148 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 PSAPL1Q6NUJ1 521 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 TMEM92Q6UXU6 159 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 SLC9A9Q8IVB4 645 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 CEP57L1Q8IYX8 460 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 TXNDC5Q8NBS9 432 aaKnown RBP16.48■□□□□ 0.23
TSR1-202ENST00000571806 TAF4BQ92750 862 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 KCNK16Q96T55 309 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 GZF1Q9H116 711 aaPredicted RBP16.48■□□□□ 0.23
TSR1-202ENST00000571806 TMEM30AQ9NV96 361 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 CHORDC1Q9UHD1 332 aaPredicted RBP16.48■□□□□ 0.23
TSR1-202ENST00000571806 CFAP45Q9UL16 551 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 INVSQ9Y283 1065 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 EPG5Q9HCE0 2579 aa16.48■□□□□ 0.23
TSR1-202ENST00000571806 SDK1Q7Z5N4 2213 aa16.47■□□□□ 0.23
TSR1-202ENST00000571806 CACNA1BQ00975 2339 aa16.47■□□□□ 0.23
TSR1-202ENST00000571806 NUP205Q92621 2012 aa16.47■□□□□ 0.23
TSR1-202ENST00000571806 TNFRSF10BO14763 440 aa16.47■□□□□ 0.23
TSR1-202ENST00000571806 HOXC11O43248 304 aaPredicted RBP16.47■□□□□ 0.23
TSR1-202ENST00000571806 CLSTN1O94985 981 aa16.47■□□□□ 0.23
TSR1-202ENST00000571806 C4BPAP04003 597 aaKnown RBP16.47■□□□□ 0.23
TSR1-202ENST00000571806 ZDHHC11BP0C7U3 371 aa16.47■□□□□ 0.23
TSR1-202ENST00000571806 CSRP1P21291 193 aaKnown RBP16.47■□□□□ 0.23
TSR1-202ENST00000571806 ME1P48163 572 aa16.47■□□□□ 0.23
TSR1-202ENST00000571806 DHPSP49366 369 aaPredicted RBP16.47■□□□□ 0.23
TSR1-202ENST00000571806 NOVA1P51513 510 aaKnown RBP16.47■□□□□ 0.23
TSR1-202ENST00000571806 SLC5A3P53794 718 aa16.47■□□□□ 0.23
TSR1-202ENST00000571806 LY6G5CQ5SRR4 150 aa16.47■□□□□ 0.23
TSR1-202ENST00000571806 FAM35AQ86V20 835 aa16.47■□□□□ 0.23
TSR1-202ENST00000571806 UNC93AQ86WB7 457 aa16.47■□□□□ 0.23
TSR1-202ENST00000571806 TTC30AQ86WT1 665 aa16.47■□□□□ 0.23
TSR1-202ENST00000571806 ZFRQ96KR1 1074 aaKnown RBP16.47■□□□□ 0.23
TSR1-202ENST00000571806 NUSAP1Q9BXS6 441 aaKnown RBP16.47■□□□□ 0.23
TSR1-202ENST00000571806 NACA2Q9H009 215 aa16.47■□□□□ 0.23
TSR1-202ENST00000571806 BLZF1Q9H2G9 400 aa16.47■□□□□ 0.23
TSR1-202ENST00000571806 SPHK2Q9NRA0 654 aa16.47■□□□□ 0.23
TSR1-202ENST00000571806 BCCIPQ9P287 314 aaKnown RBP eCLIP16.47■□□□□ 0.23
TSR1-202ENST00000571806 DEC1Q9P2X7 70 aa16.47■□□□□ 0.23
TSR1-202ENST00000571806 THADAQ6YHU6 1953 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 TBC1D3BA6NDS4 549 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 SGK1O00141 431 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 IKBKBO14920 756 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 ZBTB24O43167 697 aaPredicted RBP16.46■□□□□ 0.23
TSR1-202ENST00000571806 MYL1P05976 194 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 HOXD12P35452 270 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 CDH8P55286 799 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 GOLGA8FQ08AF8 430 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 GOLGA8DPQ0D2H9 430 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 CUL4BQ13620 913 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 RESP18Q5W5W9 173 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 PAQR9Q6ZVX9 377 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 SYT12Q8IV01 421 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms