RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 MKS1Q9NXB0 559 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 MARCOQ9UEW3 520 aaPredicted RBP16.04■□□□□ 0.16
SMG6-207ENST00000570756 TCRBV7S3A2A0A539 114 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 MEI4A8MW99 385 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 RIMBP2O15034 1052 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 HLA-DRAP01903 254 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 WEE2P0C1S8 567 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 GARTP22102 1010 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 SERPINB6P35237 376 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 CLCN2P51788 898 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 COPAP53621 1224 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 HPCAP84074 193 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 ZNF252P-AS1Q0IIN9 211 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 MTM1Q13496 603 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 UBAP2LQ14157 1087 aaKnown RBP16.04■□□□□ 0.16
SMG6-207ENST00000570756 ANGEL2Q5VTE6 544 aaKnown RBP16.04■□□□□ 0.16
SMG6-207ENST00000570756 CDHR3Q6ZTQ4 885 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 ALDH16A1Q8IZ83 802 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 ACSF2Q96CM8 615 aaPredicted RBP16.04■□□□□ 0.16
SMG6-207ENST00000570756 ZFRQ96KR1 1074 aaKnown RBP16.04■□□□□ 0.16
SMG6-207ENST00000570756 FAM213AQ9BRX8 229 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 STN1Q9H668 368 aaKnown RBP16.04■□□□□ 0.16
SMG6-207ENST00000570756 TIMMDC1Q9NPL8 285 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 KCNH7Q9NS40 1196 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 ZNF180Q9UJW8 692 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 MAD1L1Q9Y6D9 718 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 SDR42E2A6NKP2 422 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 CASQ2O14958 399 aaPredicted RBP16.03■□□□□ 0.16
SMG6-207ENST00000570756 HNRNPDLO14979 420 aaKnown RBP16.03■□□□□ 0.16
SMG6-207ENST00000570756 SNNO75324 88 aaPredicted RBP16.03■□□□□ 0.16
SMG6-207ENST00000570756 OR6B1O95007 311 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 CLPTM1O96005 669 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 C6orf222P0C671 652 aaPredicted RBP16.03■□□□□ 0.16
SMG6-207ENST00000570756 ITGB5P18084 799 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 FOLH1Q04609 750 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 ZACNQ401N2 412 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 SLC39A4Q6P5W5 647 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 BBS12Q6ZW61 710 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 WDR75Q8IWA0 830 aaKnown RBP16.03■□□□□ 0.16
SMG6-207ENST00000570756 NIPA2Q8N8Q9 360 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 PPP1R14BQ96C90 147 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 SH2D3AQ9BRG2 576 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 KIFC3Q9BVG8 833 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 PNPLA8Q9NP80 782 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 ZBTB12Q9Y330 459 aaPredicted RBP16.03■□□□□ 0.16
SMG6-207ENST00000570756 ADAMTSL1Q8N6G6 1762 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 CCDC195A0A1B0GUA6 201 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 TTC36A6NLP5 189 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 BIRC5O15392 142 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 CST8O60676 142 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 PGM3O95394 542 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 TNNI1P19237 187 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 TBXAS1P24557 533 aaPredicted RBP16.03■□□□□ 0.16
SMG6-207ENST00000570756 SSTR3P32745 418 aaPredicted RBP16.03■□□□□ 0.16
SMG6-207ENST00000570756 SLC25A3Q00325 362 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 SFSWAPQ12872 951 aaKnown RBP16.03■□□□□ 0.16
SMG6-207ENST00000570756 CYLC2Q14093 348 aaPredicted RBP16.03■□□□□ 0.16
SMG6-207ENST00000570756 CCNIQ14094 377 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 XKR9Q5GH70 373 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 TXNRD3NBQ6F5E7 133 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 C1orf228Q6PIY5 440 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 RBM44Q6ZP01 1051 aaKnown RBP16.03■□□□□ 0.16
SMG6-207ENST00000570756 ANO5Q75V66 913 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 ARCQ7LC44 396 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 CTAGE3PQ8IX95 158 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 C4orf19Q8IY42 314 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 TAB3Q8N5C8 712 aaPredicted RBP16.03■□□□□ 0.16
SMG6-207ENST00000570756 THAP1Q9NVV9 213 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 PLK2Q9NYY3 685 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 HSFX1Q9UBD0 423 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 ITGA11Q9UKX5 1188 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 TEX264Q9Y6I9 313 aa16.03■□□□□ 0.16
SMG6-207ENST00000570756 SLX4Q8IY92 1834 aa16.02■□□□□ 0.16
SMG6-207ENST00000570756 COQ9O75208 318 aa16.02■□□□□ 0.16
SMG6-207ENST00000570756 CRKP46108 304 aa16.02■□□□□ 0.16
SMG6-207ENST00000570756 EPHB1P54762 984 aa16.02■□□□□ 0.16
SMG6-207ENST00000570756 STX3Q13277 289 aa16.02■□□□□ 0.16
SMG6-207ENST00000570756 GRAMD1BQ3KR37 738 aa16.02■□□□□ 0.16
SMG6-207ENST00000570756 RNF111Q6ZNA4 994 aa16.02■□□□□ 0.16
SMG6-207ENST00000570756 IGDCC3Q8IVU1 814 aa16.02■□□□□ 0.16
SMG6-207ENST00000570756 MARVELD2Q8N4S9 558 aa16.02■□□□□ 0.16
SMG6-207ENST00000570756 CCDC33Q8N5R6 958 aa16.02■□□□□ 0.16
SMG6-207ENST00000570756 ACTRT2Q8TDY3 377 aa16.02■□□□□ 0.16
SMG6-207ENST00000570756 ZNF516Q92618 1163 aa16.02■□□□□ 0.16
SMG6-207ENST00000570756 SAE1Q9UBE0 346 aaPredicted RBP16.02■□□□□ 0.16
SMG6-207ENST00000570756 ARHGAP10A1A4S6 786 aa16.02■□□□□ 0.15
SMG6-207ENST00000570756 CCDC160A6NGH7 325 aa16.02■□□□□ 0.15
SMG6-207ENST00000570756 VILLO15195 856 aa16.02■□□□□ 0.15
SMG6-207ENST00000570756 GH2P01242 217 aa16.02■□□□□ 0.15
SMG6-207ENST00000570756 KRT7P08729 469 aa16.02■□□□□ 0.15
SMG6-207ENST00000570756 SMIM18P0DKX4 95 aa16.02■□□□□ 0.15
SMG6-207ENST00000570756 CLDN10P78369 228 aa16.02■□□□□ 0.15
SMG6-207ENST00000570756 NCOA4Q13772 614 aa16.02■□□□□ 0.15
SMG6-207ENST00000570756 OLFML2BQ68BL8 750 aa16.02■□□□□ 0.15
SMG6-207ENST00000570756 NIPA1Q7RTP0 329 aa16.02■□□□□ 0.15
SMG6-207ENST00000570756 PPM1NQ8N819 430 aa16.02■□□□□ 0.15
SMG6-207ENST00000570756 NLRP4Q96MN2 994 aa16.02■□□□□ 0.15
SMG6-207ENST00000570756 ZDHHC15Q96MV8 337 aa16.02■□□□□ 0.15
SMG6-207ENST00000570756 C10orf88Q9H8K7 445 aa16.02■□□□□ 0.15
SMG6-207ENST00000570756 C3orf70A6NLC5 250 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms