RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 EGFLAMQ63HQ2 1017 aa11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 SCARA3Q6AZY7 606 aa11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 ZCCHC9Q8N567 271 aaKnown RBP11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 SYT2Q8N9I0 419 aaPredicted RBP11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 TERB1Q8NA31 727 aa11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 FOXJ1Q92949 421 aa11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 GTF3C6Q969F1 213 aa11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 FUBP3Q96I24 572 aaKnown RBP eCLIP11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 ZNF560Q96MR9 790 aa11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 FCRL3Q96P31 734 aaPredicted RBP11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 KIF2CQ99661 725 aa11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 TRPM5Q9NZQ8 1165 aa11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 STARD13Q9Y3M8 1113 aa11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 TISP43B9A030 160 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 ANKRD63C9JTQ0 380 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 E9PAM4 449 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 PLK4O00444 970 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 CAPN9O14815 690 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 FLRT2O43155 660 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 ZBTB24O43167 697 aaPredicted RBP11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 CER1O95813 267 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 OAS1P00973 400 aaKnown RBP11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 HLA-EP13747 358 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 SLC12A3P55017 1021 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 MYL7Q01449 175 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 GAD2Q05329 585 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 NUMA1Q14980 2115 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 PTPRNQ16849 979 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 FAM171BQ6P995 826 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 DENND5BQ6ZUT9 1274 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 LURAP1LQ8IV03 231 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 SPATA17Q96L03 361 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 MRGPRX1Q96LB2 322 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 RAB34Q9BZG1 259 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 MIR1-1HGQ9H1L0 117 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 LARSQ9P2J5 1176 aaKnown RBP11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 DEC1Q9P2X7 70 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 PCDHGB2Q9Y5G2 931 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 RAD54BQ9Y620 910 aa11.16□□□□□ -0.62
CTDNEP1-202ENST00000570380 SPTA1P02549 2419 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 MEI4A8MW99 385 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 GABRDO14764 452 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 BCAT2O15382 392 aaPredicted RBP11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 HOXC11O43248 304 aaPredicted RBP11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 HUS1O60921 280 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 ATP2C2O75185 946 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 ABL1P00519 1130 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 CD6P30203 668 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 POLR2BP30876 1174 aaKnown RBP11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 PNPLA4P41247 253 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 MYO1EQ12965 1108 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 ZRSR1Q15695 479 aaKnown RBP11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 CCDC157Q569K6 752 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 ARSHQ5FYA8 562 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 BTBD8Q5XKL5 378 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 IL27RAQ6UWB1 636 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 DHRS13Q6UX07 377 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 CRELD2Q6UXH1 353 aaPredicted RBP11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 LRRC69Q6ZNQ3 347 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 CHPFQ8IZ52 775 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 TMEM86AQ8N2M4 240 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 PLIN2Q99541 437 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 GABRG3Q99928 467 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 TTLL2Q9BWV7 592 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 TBC1D14Q9P2M4 693 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 NFE2L3Q9Y4A8 694 aa11.15□□□□□ -0.62
CTDNEP1-202ENST00000570380 TEX51A0A1B0GUA7 166 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 E2F8A0AVK6 867 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 K7ENM7 598 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 ARHGAP6O43182 974 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 TNFSF14O43557 240 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 MBL2P11226 248 aaPredicted RBP11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 NCAM1P13591 858 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 BDNFP23560 247 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 GRIK1P39086 918 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 WNT7BP56706 349 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 PREPLQ4J6C6 727 aaPredicted RBP11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 HYIQ5T013 277 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 DCAF12L1Q5VU92 463 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 ADALQ6DHV7 355 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 SDE2Q6IQ49 451 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 VSTM1Q6UX27 236 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 KIAA1324Q6UXG2 1013 aaKnown RBP11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 NUDT18Q6ZVK8 323 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 GPR155Q7Z3F1 870 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 TMEM25Q86YD3 366 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 C1orf216Q8TAB5 229 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 MYLPFQ96A32 169 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 TOE1Q96GM8 510 aaKnown RBP11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 GPR174Q9BXC1 333 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 FOXP1Q9H334 677 aaPredicted RBP11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 WSB2Q9NYS7 404 aaPredicted RBP11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 KCND2Q9NZV8 630 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 MAGEC2Q9UBF1 373 aaPredicted RBP11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 AGO2Q9UKV8 859 aaKnown RBP11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 AGAP1Q9UPQ3 857 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 CKAP5Q14008 2032 aa11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 COL5A1P20908 1838 aaPredicted RBP11.14□□□□□ -0.63
CTDNEP1-202ENST00000570380 CAPN8A6NHC0 703 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms