RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 CCDC186Q7Z3E2 898 aa13.75□□□□□ -0.21
CNOT1-217ENST00000569263 PLCD3Q8N3E9 789 aa13.75□□□□□ -0.21
CNOT1-217ENST00000569263 TMEM35BQ8NCS4 154 aa13.75□□□□□ -0.21
CNOT1-217ENST00000569263 C1orf131Q8NDD1 294 aaKnown RBP13.75□□□□□ -0.21
CNOT1-217ENST00000569263 IPO4Q8TEX9 1081 aaKnown RBP13.75□□□□□ -0.21
CNOT1-217ENST00000569263 DDX1Q92499 740 aaKnown RBP13.75□□□□□ -0.21
CNOT1-217ENST00000569263 MRFAP1L1Q96HT8 127 aa13.75□□□□□ -0.21
CNOT1-217ENST00000569263 HSFY1Q96LI6 401 aa13.75□□□□□ -0.21
CNOT1-217ENST00000569263 LHX5Q9H2C1 402 aa13.75□□□□□ -0.21
CNOT1-217ENST00000569263 TLR8Q9NR97 1041 aaKnown RBP13.75□□□□□ -0.21
CNOT1-217ENST00000569263 IL37Q9NZH6 218 aa13.75□□□□□ -0.21
CNOT1-217ENST00000569263 GMIPQ9P107 970 aa13.75□□□□□ -0.21
CNOT1-217ENST00000569263 ZMYM5Q9UJ78 669 aa13.75□□□□□ -0.21
CNOT1-217ENST00000569263 NOCTQ9UK39 431 aaKnown RBP13.75□□□□□ -0.21
CNOT1-217ENST00000569263 SCML2Q9UQR0 700 aa13.75□□□□□ -0.21
CNOT1-217ENST00000569263 XIRP2A4UGR9 3374 aa13.75□□□□□ -0.21
CNOT1-217ENST00000569263 NCANO14594 1321 aa13.74□□□□□ -0.21
CNOT1-217ENST00000569263 FAM92AA1XBS5 289 aa13.74□□□□□ -0.21
CNOT1-217ENST00000569263 PIK3R2O00459 728 aa13.74□□□□□ -0.21
CNOT1-217ENST00000569263 NRG2O14511 850 aaPredicted RBP13.74□□□□□ -0.21
CNOT1-217ENST00000569263 LSM8O95777 96 aaKnown RBP13.74□□□□□ -0.21
CNOT1-217ENST00000569263 ZBED1O96006 694 aa13.74□□□□□ -0.21
CNOT1-217ENST00000569263 USP17L7P0C7H9 530 aa13.74□□□□□ -0.21
CNOT1-217ENST00000569263 LAMP2P13473 410 aa13.74□□□□□ -0.21
CNOT1-217ENST00000569263 ACADSBP45954 432 aa13.74□□□□□ -0.21
CNOT1-217ENST00000569263 TDRD12Q587J7 1177 aaKnown RBP13.74□□□□□ -0.21
CNOT1-217ENST00000569263 STXBP5Q5T5C0 1151 aa13.74□□□□□ -0.21
CNOT1-217ENST00000569263 TRIM72Q6ZMU5 477 aa13.74□□□□□ -0.21
CNOT1-217ENST00000569263 TMEM150AQ86TG1 271 aa13.74□□□□□ -0.21
CNOT1-217ENST00000569263 MAB21L3Q8N8X9 362 aa13.74□□□□□ -0.21
CNOT1-217ENST00000569263 MSANTD4Q8NCY6 345 aa13.74□□□□□ -0.21
CNOT1-217ENST00000569263 ADAMTS19Q8TE59 1207 aa13.74□□□□□ -0.21
CNOT1-217ENST00000569263 STK32AQ8WU08 396 aa13.74□□□□□ -0.21
CNOT1-217ENST00000569263 ULBP1Q9BZM6 244 aa13.74□□□□□ -0.21
CNOT1-217ENST00000569263 TASP1Q9H6P5 420 aa13.74□□□□□ -0.21
CNOT1-217ENST00000569263 SYNCQ9H7C4 482 aa13.74□□□□□ -0.21
CNOT1-217ENST00000569263 CYLDQ9NQC7 956 aa13.74□□□□□ -0.21
CNOT1-217ENST00000569263 EPS15L1Q9UBC2 864 aa13.74□□□□□ -0.21
CNOT1-217ENST00000569263 CHORDC1Q9UHD1 332 aaPredicted RBP13.74□□□□□ -0.21
CNOT1-217ENST00000569263 USP3Q9Y6I4 520 aa13.74□□□□□ -0.21
CNOT1-217ENST00000569263 TRAV19A0A0A6YYK7 116 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 ZNF840PA6NDX5 716 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 LOC730098B7Z3J9 87 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 FBXO21O94952 628 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 CKMP06732 381 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 AVPR1AP37288 418 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 PSEN1P49768 467 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 SNX16P57768 344 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 FMO1Q01740 532 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 KLHL30Q0D2K2 578 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 TSR1Q2NL82 804 aaKnown RBP13.73□□□□□ -0.21
CNOT1-217ENST00000569263 TXNDC8Q6A555 127 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 MTSS1LQ765P7 747 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 IRF2BP2Q7Z5L9 587 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 MON1AQ86VX9 555 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 ZDHHC14Q8IZN3 488 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 ARHGAP18Q8N392 663 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 ZSCAN18Q8TBC5 510 aaPredicted RBP13.73□□□□□ -0.21
CNOT1-217ENST00000569263 GOLGA1Q92805 767 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 PPP1R13BQ96KQ4 1090 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 AGPAT1Q99943 283 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 NACA2Q9H009 215 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 MIS12Q9H081 205 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 CNGB3Q9NQW8 809 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 AIPL1Q9NZN9 384 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 NAGPAQ9UK23 515 aa13.73□□□□□ -0.21
CNOT1-217ENST00000569263 A0A1W2PQH9 124 aa13.72□□□□□ -0.21
CNOT1-217ENST00000569263 C2orf78A6NCI8 922 aa13.72□□□□□ -0.21
CNOT1-217ENST00000569263 SOBPA7XYQ1 873 aa13.72□□□□□ -0.21
CNOT1-217ENST00000569263 E5RJQ4 531 aa13.72□□□□□ -0.21
CNOT1-217ENST00000569263 SART1O43290 800 aaKnown RBP13.72□□□□□ -0.21
CNOT1-217ENST00000569263 CHRNB2P17787 502 aa13.72□□□□□ -0.21
CNOT1-217ENST00000569263 CDH5P33151 784 aaPredicted RBP13.72□□□□□ -0.21
CNOT1-217ENST00000569263 PRKCIP41743 596 aa13.72□□□□□ -0.21
CNOT1-217ENST00000569263 YWHAGP61981 247 aaKnown RBP eCLIP13.72□□□□□ -0.21
CNOT1-217ENST00000569263 NOMO3P69849 1222 aa13.72□□□□□ -0.21
CNOT1-217ENST00000569263 FAM78AQ5JUQ0 283 aa13.72□□□□□ -0.21
CNOT1-217ENST00000569263 HECTD3Q5T447 861 aa13.72□□□□□ -0.21
CNOT1-217ENST00000569263 NAA35Q5VZE5 725 aa13.72□□□□□ -0.21
CNOT1-217ENST00000569263 E4F1Q66K89 784 aaPredicted RBP13.72□□□□□ -0.21
CNOT1-217ENST00000569263 DRC7Q8IY82 874 aa13.72□□□□□ -0.21
CNOT1-217ENST00000569263 CMTM8Q8IZV2 173 aa13.72□□□□□ -0.21
CNOT1-217ENST00000569263 WDTC1Q8N5D0 677 aa13.72□□□□□ -0.21
CNOT1-217ENST00000569263 SYN2Q92777 582 aaPredicted RBP13.72□□□□□ -0.21
CNOT1-217ENST00000569263 SMARCD2Q92925 531 aa13.72□□□□□ -0.21
CNOT1-217ENST00000569263 ZSWIM3Q96MP5 696 aa13.72□□□□□ -0.21
CNOT1-217ENST00000569263 SLC4A5Q9BY07 1137 aa13.72□□□□□ -0.21
CNOT1-217ENST00000569263 SLC46A2Q9BY10 475 aa13.72□□□□□ -0.21
CNOT1-217ENST00000569263 HAUS4Q9H6D7 363 aa13.72□□□□□ -0.21
CNOT1-217ENST00000569263 ZNHIT6Q9NWK9 470 aaKnown RBP13.72□□□□□ -0.21
CNOT1-217ENST00000569263 CYTH4Q9UIA0 394 aa13.72□□□□□ -0.21
CNOT1-217ENST00000569263 C5orf42Q9H799 3197 aa13.72□□□□□ -0.21
CNOT1-217ENST00000569263 SPTBN5Q9NRC6 3674 aaKnown RBP13.71□□□□□ -0.21
CNOT1-217ENST00000569263 FAM170AA1A519 330 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 GOLGA6L3A6NEY3 463 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 C19orf67A6NJJ6 358 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 DPYSL4O14531 572 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 MFAP3LO75121 409 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 CYP1A1P04798 512 aaPredicted RBP13.71□□□□□ -0.21
CNOT1-217ENST00000569263 ZDHHC11BP0C7U3 371 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms