RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 SMARCD2Q92925 531 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 ZSWIM3Q96MP5 696 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 NUCKS1Q9H1E3 243 aaKnown RBP13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 OBSL1O75147 1896 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 EIF3CLB5ME19 914 aaKnown RBP13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 F11P03951 625 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 SLC9A1P19634 815 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 CASQ1P31415 396 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 CYP4F8P98187 520 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 FAM78AQ5JUQ0 283 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 STXBP5Q5T5C0 1151 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 GPR158Q5T848 1215 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 PPP1R26Q5T8A7 1209 aaPredicted RBP13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 PHLDB3Q6NSJ2 640 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 TMEM270Q6UE05 265 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 NUP93Q8N1F7 819 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 SLC44A3Q8N4M1 653 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 UBR7Q8N806 425 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 ZSCAN18Q8TBC5 510 aaPredicted RBP13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 MRPS31Q92665 395 aaKnown RBP13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 SYN2Q92777 582 aaPredicted RBP13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 KAT5Q92993 513 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 FAM81BQ96LP2 452 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 ASB16Q96NS5 453 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 EIF3CQ99613 913 aaKnown RBP13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 KXD1Q9BQD3 176 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 HAUS4Q9H6D7 363 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 TASP1Q9H6P5 420 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 NHEJ1Q9H9Q4 299 aaPredicted RBP13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 ZFP14Q9HCL3 533 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 CSNK1G1Q9HCP0 422 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 ZMYM5Q9UJ78 669 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 PCDHB4Q9Y5E5 795 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 DENND4CQ5VZ89 1909 aa13.25□□□□□ -0.29
NSMCE1-214ENST00000569236 ZNF638Q14966 1978 aaKnown RBP13.24□□□□□ -0.29
NSMCE1-214ENST00000569236 A0A0U1RQJ8 604 aa13.24□□□□□ -0.29
NSMCE1-214ENST00000569236 LRRC53A6NM62 1247 aa13.24□□□□□ -0.29
NSMCE1-214ENST00000569236 IPO7O95373 1038 aaKnown RBP13.24□□□□□ -0.29
NSMCE1-214ENST00000569236 ACO1P21399 889 aaKnown RBP13.24□□□□□ -0.29
NSMCE1-214ENST00000569236 MAP3K7CLP57077 242 aa13.24□□□□□ -0.29
NSMCE1-214ENST00000569236 USP46P62068 366 aa13.24□□□□□ -0.29
NSMCE1-214ENST00000569236 IFRD2Q12894 506 aaPredicted RBP13.24□□□□□ -0.29
NSMCE1-214ENST00000569236 CLEC20AQ6ZU45 233 aa13.24□□□□□ -0.29
NSMCE1-214ENST00000569236 TMEM150AQ86TG1 271 aa13.24□□□□□ -0.29
NSMCE1-214ENST00000569236 ATRIPQ8WXE1 791 aa13.24□□□□□ -0.29
NSMCE1-214ENST00000569236 TSC1Q92574 1164 aa13.24□□□□□ -0.29
NSMCE1-214ENST00000569236 SMOQ99835 787 aa13.24□□□□□ -0.29
NSMCE1-214ENST00000569236 RPP25Q9BUL9 199 aaKnown RBP13.24□□□□□ -0.29
NSMCE1-214ENST00000569236 TTLL2Q9BWV7 592 aa13.24□□□□□ -0.29
NSMCE1-214ENST00000569236 UBE2TQ9NPD8 197 aaPredicted RBP13.24□□□□□ -0.29
NSMCE1-214ENST00000569236 APEX2Q9UBZ4 518 aa13.24□□□□□ -0.29
NSMCE1-214ENST00000569236 DUSP12Q9UNI6 340 aa13.24□□□□□ -0.29
NSMCE1-214ENST00000569236 NUP210Q8TEM1 1887 aaPredicted RBP13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 ECI2O75521 394 aa13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 BEST1O76090 585 aa13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 RTN3O95197 1032 aaPredicted RBP13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 CD19P15391 556 aa13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 NPR3P17342 541 aa13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 DDX6P26196 483 aaKnown RBP eCLIP13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 PON1P27169 355 aa13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 MFAP3P55082 362 aa13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 SGO2Q562F6 1265 aa13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 ARHGAP17Q68EM7 881 aa13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 ENOSF1Q7L5Y1 443 aa13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 CACNA2D4Q7Z3S7 1137 aa13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 ZMIZ2Q8NF64 920 aa13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 ANKRD7Q92527 254 aa13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 JAKMIP2Q96AA8 810 aa13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 ELSPBP1Q96BH3 223 aa13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 KREMEN1Q96MU8 473 aa13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 SLITRK1Q96PX8 696 aa13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 C1QTNF1Q9BXJ1 281 aa13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 IRX2Q9BZI1 471 aaPredicted RBP13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 SMOC2Q9H3U7 446 aa13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 PLCB1Q9NQ66 1216 aa13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 ARHGAP20Q9P2F6 1191 aa13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 KIAA1257Q9ULG3 409 aa13.23□□□□□ -0.29
NSMCE1-214ENST00000569236 SOBPA7XYQ1 873 aa13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 TADA3O75528 432 aa13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 URI1O94763 535 aaPredicted RBP13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 LCA5LO95447 670 aa13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 PAEPP09466 180 aa13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 VDRP11473 427 aa13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 FCARP24071 287 aa13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 YWHAQP27348 245 aa13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 AVPR1AP37288 418 aa13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 PPP3CCP48454 512 aa13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 SLC5A3P53794 718 aa13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 SLC8A3P57103 927 aa13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 SIGLEC14Q08ET2 396 aa13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 TXNDC8Q6A555 127 aa13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 TANGO2Q6ICL3 276 aa13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 TRIM67Q6ZTA4 783 aa13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 ARID3BQ8IVW6 561 aaPredicted RBP13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 MAB21L3Q8N8X9 362 aa13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 E2F7Q96AV8 911 aa13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 CCDC42Q96M95 316 aa13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 LSM14BQ9BX40 385 aaKnown RBP13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 SLC46A2Q9BY10 475 aa13.22□□□□□ -0.29
NSMCE1-214ENST00000569236 DUSP16Q9BY84 665 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms