RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 DR1Q01658 176 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 COL19A1Q14993 1142 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 ODF2Q5BJF6 829 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 TCEAL5Q5H9L2 206 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 LLGL2Q6P1M3 1020 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 SYDE1Q6ZW31 735 aaPredicted RBP15.34■□□□□ 0.05
COMMD4-221ENST00000567935 ARCQ7LC44 396 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 ECHDC2Q86YB7 292 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 PRELID2Q8N945 189 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 FBXO22Q8NEZ5 403 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 SLC35F5Q8WV83 523 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 SEC14L1Q92503 715 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 SLCO2A1Q92959 643 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 MAGOHBQ96A72 148 aaKnown RBP15.34■□□□□ 0.05
COMMD4-221ENST00000567935 MRPL38Q96DV4 380 aaKnown RBP15.34■□□□□ 0.05
COMMD4-221ENST00000567935 RAD9AQ99638 391 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 HNRNPABQ99729 332 aaKnown RBP15.34■□□□□ 0.05
COMMD4-221ENST00000567935 LRRC19Q9H756 370 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 RGS18Q9NS28 235 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 ASNSD1Q9NWL6 643 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 DSEQ9UL01 958 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 EFR3BQ9Y2G0 817 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 CACNA1BQ00975 2339 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 GOLGA8SH3BPF8 625 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 DPYSL4O14531 572 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 MGEA5O60502 916 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 RNF8O76064 485 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 RFC1P35251 1148 aaPredicted RBP15.33■□□□□ 0.04
COMMD4-221ENST00000567935 PCK1P35558 622 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 SSR1P43307 286 aaKnown RBP15.33■□□□□ 0.04
COMMD4-221ENST00000567935 ID4P47928 161 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 ZNF143P52747 638 aaPredicted RBP15.33■□□□□ 0.04
COMMD4-221ENST00000567935 TAS2R40P59535 323 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 ZNF252P-AS1Q0IIN9 211 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 TUSC3Q13454 348 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 CASP8Q14790 479 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 GPNMBQ14956 572 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 TCTN1Q2MV58 587 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 FAM102AQ5T9C2 384 aaPredicted RBP15.33■□□□□ 0.04
COMMD4-221ENST00000567935 SLC24A5Q71RS6 500 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 ZNF598Q86UK7 904 aaKnown RBP15.33■□□□□ 0.04
COMMD4-221ENST00000567935 FBXL6Q8N531 539 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 C12orf29Q8N999 325 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 B3GALNT2Q8NCR0 500 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 UBA3Q8TBC4 463 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 GRK7Q8WTQ7 553 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 RSPH1Q8WYR4 309 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 PKNOX2Q96KN3 472 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 SENP8Q96LD8 212 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 CNPY3Q9BT09 278 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 OSBPL8Q9BZF1 889 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 GOLGA2P5Q9HBQ8 144 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 ST7Q9NRC1 585 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 METTL5Q9NRN9 209 aaKnown RBP15.33■□□□□ 0.04
COMMD4-221ENST00000567935 AMACRQ9UHK6 382 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 USTQ9Y2C2 406 aa15.33■□□□□ 0.04
COMMD4-221ENST00000567935 DMDP11532 3685 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 FGFR1P11362 822 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 ODC1P11926 461 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 SELPP16109 830 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 GPD1P21695 349 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 PCSK1P29120 753 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 LTBRP36941 435 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 COILP38432 576 aaPredicted RBP15.32■□□□□ 0.04
COMMD4-221ENST00000567935 PLA2G4AP47712 749 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 SCNN1GP51170 649 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 OGDHQ02218 1023 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 SIX1Q15475 284 aaPredicted RBP15.32■□□□□ 0.04
COMMD4-221ENST00000567935 SMAD2Q15796 467 aaKnown RBP15.32■□□□□ 0.04
COMMD4-221ENST00000567935 UPP1Q16831 310 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 TIGD5Q53EQ6 642 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 OR6B2Q6IFH4 312 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 FAM117BQ6P1L5 589 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 TRAF7Q6Q0C0 670 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 DSTYKQ6XUX3 929 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 TTC30AQ86WT1 665 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 CPNE8Q86YQ8 564 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 CCDC50Q8IVM0 306 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 FAM49BQ9NUQ9 324 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 CLDND1Q9NY35 253 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 KANSL3Q9P2N6 904 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 NME7Q9Y5B8 376 aa15.32■□□□□ 0.04
COMMD4-221ENST00000567935 TDRD15B5MCY1 1934 aaKnown RBP15.31■□□□□ 0.04
COMMD4-221ENST00000567935 C2CD4BA6NLJ0 364 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 C9IYK1 514 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 E5RJQ4 531 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 PROB1E7EW31 1015 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 F8VP50 259 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 H0Y858 1186 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 XPO1O14980 1071 aaKnown RBP15.31■□□□□ 0.04
COMMD4-221ENST00000567935 ZMYND10O75800 440 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 TJP3O95049 919 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 GJB6O95452 261 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 PARNO95453 639 aaKnown RBP15.31■□□□□ 0.04
COMMD4-221ENST00000567935 KRT1P04264 644 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 CYP11A1P05108 521 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 RARAP10276 462 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 PTPN1P18031 435 aaKnown RBP15.31■□□□□ 0.04
COMMD4-221ENST00000567935 TNNT3P45378 269 aaPredicted RBP15.31■□□□□ 0.04
COMMD4-221ENST00000567935 FAM189BP81408 668 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms