RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	FAXDC2	Q96IV6	333 aa		7.33	□□□□□ -1.24
SF3B3-209	ENST00000567635	HEXIM2	Q96MH2	286 aa	Known RBP	7.33	□□□□□ -1.24
SF3B3-209	ENST00000567635	HNRNPAB	Q99729	332 aa	Known RBP	7.33	□□□□□ -1.24
SF3B3-209	ENST00000567635	SMO	Q99835	787 aa		7.33	□□□□□ -1.24
SF3B3-209	ENST00000567635	NT5C1A	Q9BXI3	368 aa		7.33	□□□□□ -1.24
SF3B3-209	ENST00000567635	NIF3L1	Q9GZT8	377 aa		7.33	□□□□□ -1.24
SF3B3-209	ENST00000567635	FBXO44	Q9H4M3	255 aa		7.33	□□□□□ -1.24
SF3B3-209	ENST00000567635	ECT2	Q9H8V3	914 aa		7.33	□□□□□ -1.24
SF3B3-209	ENST00000567635	APOBEC3G	Q9HC16	384 aa	Known RBP	7.33	□□□□□ -1.24
SF3B3-209	ENST00000567635	CSNK1G1	Q9HCP0	422 aa		7.33	□□□□□ -1.24
SF3B3-209	ENST00000567635	FAM49B	Q9NUQ9	324 aa		7.33	□□□□□ -1.24
SF3B3-209	ENST00000567635	RAB20	Q9NX57	234 aa		7.33	□□□□□ -1.24
SF3B3-209	ENST00000567635	CIZ1	Q9ULV3	898 aa	Predicted RBP	7.33	□□□□□ -1.24
SF3B3-209	ENST00000567635	WNT6	Q9Y6F9	365 aa		7.33	□□□□□ -1.24
SF3B3-209	ENST00000567635	THADA	Q6YHU6	1953 aa		7.33	□□□□□ -1.24
SF3B3-209	ENST00000567635	KIAA1549L	Q6ZVL6	1849 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	SLC9A3R1	O14745	358 aa	Predicted RBP	7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	LILRB5	O75023	590 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	ATG13	O75143	517 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	GADD45B	O75293	160 aa	Predicted RBP	7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	CILP	O75339	1184 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	BEST1	O76090	585 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	OLFM2	O95897	454 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	OAS1	P00973	400 aa	Known RBP	7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	FAM200B	P0CF97	657 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	MBL2	P11226	248 aa	Predicted RBP	7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	TDGF1	P13385	188 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	CD58	P19256	250 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	DRD1	P21728	446 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	ADORA2B	P29275	332 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	GJA4	P35212	333 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	PPP1R2	P41236	205 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	MXI1	P50539	228 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	SLC5A3	P53794	718 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	PMS1	P54277	932 aa	Known RBP	7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	MAP3K7CL	P57077	242 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	ZXDB	P98169	803 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	USP4	Q13107	963 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	CCIN	Q13939	588 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	GAS6	Q14393	721 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	EML3	Q32P44	896 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	HECTD3	Q5T447	861 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	TCERG1L	Q5VWI1	586 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	SNX30	Q5VWJ9	437 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	FSTL4	Q6MZW2	842 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	FILIP1	Q7Z7B0	1213 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	DDX42	Q86XP3	938 aa	Known RBP eCLIP	7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	ZC3H3	Q8IXZ2	948 aa	Known RBP	7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	ADGRG2	Q8IZP9	1017 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	SUMF1	Q8NBK3	374 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	ZMIZ2	Q8NF64	920 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	WHAMM	Q8TF30	809 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	TATDN2	Q93075	761 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	CEP63	Q96MT8	703 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	PHF12	Q96QT6	1004 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	P2RY13	Q9BPV8	354 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	FAM124B	Q9H5Z6	455 aa	Predicted RBP	7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	METTL14	Q9HCE5	456 aa	Known RBP	7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	FBRSL1	Q9HCM7	1045 aa	Known RBP	7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	KRT82	Q9NSB4	513 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	HMGXB4	Q9UGU5	601 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	ARMCX3	Q9UH62	379 aa	Predicted RBP	7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	MAN1B1	Q9UKM7	699 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	COQ4	Q9Y3A0	265 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	CPQ	Q9Y646	472 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	CEP192	Q8TEP8	1941 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	NUP205	Q92621	2012 aa		7.32	□□□□□ -1.24
SF3B3-209	ENST00000567635	E2F8	A0AVK6	867 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	FAM92A	A1XBS5	289 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	TRIM49B	A6NDI0	452 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	PPP1R3G	B7ZBB8	358 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	HHLA1	C9JL84	531 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	COCH	O43405	550 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	PAPSS2	O95340	614 aa	Predicted RBP	7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	NFATC1	O95644	943 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	ZDHHC11B	P0C7U3	371 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	CHRM1	P11229	460 aa	Predicted RBP	7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	HOXA6	P31267	233 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	TUB	P50607	506 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	SATB1	Q01826	763 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	MORC3	Q14149	939 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	FBXO43	Q4G163	708 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	CBWD6	Q4V339	395 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	DCAF17	Q5H9S7	520 aa	Predicted RBP	7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	CBWD3	Q5JTY5	395 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	CBWD5	Q5RIA9	395 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635		Q6ZS52	159 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	RUBCN	Q92622	972 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	CD101	Q93033	1021 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	CHFR	Q96EP1	664 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	TMEM176A	Q96HP8	235 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	TWNK	Q96RR1	684 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	DUSP9	Q99956	384 aa	Known RBP	7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	DUSP16	Q9BY84	665 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	UBXN6	Q9BZV1	441 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	CCSER2	Q9H7U1	834 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	TLR8	Q9NR97	1041 aa	Known RBP	7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	CISH	Q9NSE2	258 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	SMPD4	Q9NXE4	827 aa		7.31	□□□□□ -1.24
SF3B3-209	ENST00000567635	CHMP5	Q9NZZ3	219 aa		7.31	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 775.6 ms