RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 FAM126BQ8IXS8 530 aa11.33□□□□□ -0.6
PDXDC1-214ENST00000566633 GLIS1Q8NBF1 620 aa11.33□□□□□ -0.6
PDXDC1-214ENST00000566633 DIS3LQ8TF46 1054 aaKnown RBP11.33□□□□□ -0.6
PDXDC1-214ENST00000566633 FAXDC2Q96IV6 333 aa11.33□□□□□ -0.6
PDXDC1-214ENST00000566633 CCDC134Q9H6E4 229 aa11.33□□□□□ -0.6
PDXDC1-214ENST00000566633 DDX56Q9NY93 547 aaKnown RBP11.33□□□□□ -0.6
PDXDC1-214ENST00000566633 hCG_1818297A0A087WSY0 165 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 A8MXQ7 604 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 MED7O43513 233 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 MICAL2O94851 1124 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 CD4P01730 458 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 ACAT1P24752 427 aaKnown RBP11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 CDKN2BP42772 138 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 CDK7P50613 346 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 CCL23P55773 120 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 DSC3Q14574 896 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 GPNMBQ14956 572 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 CNGA2Q16280 664 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 PPP1R26Q5T8A7 1209 aaPredicted RBP11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 GKAP1Q5VSY0 366 aaPredicted RBP11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 PACS2Q86VP3 889 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 ZCCHC9Q8N567 271 aaKnown RBP11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 ALLCQ8N6M5 410 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 CCHCR1Q8TD31 782 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 ARHGEF2Q92974 986 aaKnown RBP11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 ACSF2Q96CM8 615 aaPredicted RBP11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 NT5C1AQ9BXI3 368 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 PPP1R12CQ9BZL4 782 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 FOXP3Q9BZS1 431 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 RSAD1Q9HA92 442 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 CYP3A43Q9HB55 503 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 ZNF148Q9UQR1 794 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 C3orf70A6NLC5 250 aaPredicted RBP11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 M0QYV0 167 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 NBNO60934 754 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 KRT3P12035 628 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 TAF6P49848 677 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 C1QTNF8P60827 252 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 FAM26DQ5JW98 314 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 RNF187Q5TA31 235 aaPredicted RBP11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 LRRC8DQ7L1W4 858 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 POLNQ7Z5Q5 900 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 CACNA2D3Q8IZS8 1091 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 ARFGAP1Q8N6T3 406 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 LRRC52Q8N7C0 313 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 DBF4BQ8NFT6 615 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 KBTBD7Q8WVZ9 684 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 LINC01599Q8WXQ3 324 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 CABS1Q96KC9 395 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 PRMT1Q99873 361 aaKnown RBP11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 TSPAN16Q9UKR8 245 aa11.32□□□□□ -0.6
PDXDC1-214ENST00000566633 LRRD1A4D1F6 860 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 GOLGA8SH3BPF8 625 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 ATP2C2O75185 946 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 FSBPO95073 299 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 ZSCAN5DPP0CG00 497 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 PSMC1P62191 440 aaKnown RBP11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 INCA1Q0VD86 236 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 OASLQ15646 514 aaKnown RBP11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 JOSD2Q8TAC2 188 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 NKD2Q969F2 451 aaPredicted RBP11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 CPXM1Q96SM3 734 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 RBM15Q96T37 977 aaKnown RBP eCLIP11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 CTNNAL1Q9UBT7 734 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 CYB561D2O14569 222 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 DNALI1O14645 258 aaPredicted RBP11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 XPOTO43592 962 aaKnown RBP11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 STAU1O95793 577 aaKnown RBP11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 CCDC130P13994 396 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 ETS1P14921 441 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 CREB1P16220 341 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 PSMA2P25787 234 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 ATP5DP30049 168 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 GNL1P36915 607 aaPredicted RBP11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 MAGEA4P43358 317 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 RGS7P49802 495 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 ARSEP51690 589 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 VCPP55072 806 aaKnown RBP11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 SLC25A11Q02978 314 aaKnown RBP11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 TCTN1Q2MV58 587 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 TTC31Q49AM3 519 aaPredicted RBP11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 WSCD1Q658N2 575 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 PIGWQ7Z7B1 504 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 ECHDC2Q86YB7 292 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 FNIP1Q8TF40 1166 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 C9orf72Q96LT7 481 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 OGDHLQ9ULD0 1010 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 GIT1Q9Y2X7 761 aa11.31□□□□□ -0.6
PDXDC1-214ENST00000566633 B4GALT3O60512 393 aa11.3□□□□□ -0.6
PDXDC1-214ENST00000566633 LRCH4O75427 683 aa11.3□□□□□ -0.6
PDXDC1-214ENST00000566633 B3GAT3O94766 335 aa11.3□□□□□ -0.6
PDXDC1-214ENST00000566633 ITGB1P05556 798 aa11.3□□□□□ -0.6
PDXDC1-214ENST00000566633 ITGAVP06756 1048 aa11.3□□□□□ -0.6
PDXDC1-214ENST00000566633 BRCC3P46736 316 aa11.3□□□□□ -0.6
PDXDC1-214ENST00000566633 MNX1P50219 401 aaPredicted RBP11.3□□□□□ -0.6
PDXDC1-214ENST00000566633 RABGGTBP53611 331 aa11.3□□□□□ -0.6
PDXDC1-214ENST00000566633 GSCP56915 257 aaPredicted RBP11.3□□□□□ -0.6
PDXDC1-214ENST00000566633 VSTM1Q6UX27 236 aa11.3□□□□□ -0.6
PDXDC1-214ENST00000566633 CEP128Q6ZU80 1094 aa11.3□□□□□ -0.6
PDXDC1-214ENST00000566633 MRPL10Q7Z7H8 261 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms