RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 KITP10721 976 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 STIP1P31948 543 aaKnown RBP14.84□□□□□ -0.03
CDH1-209ENST00000566510 GMPSP49915 693 aaPredicted RBP14.84□□□□□ -0.03
CDH1-209ENST00000566510 ERFP50548 548 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 CDK16Q00536 496 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 KRT81Q14533 505 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 IER5Q5VY09 327 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 MPZL3Q6UWV2 235 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 RINLQ6ZS11 566 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 LMNTD2Q8IXW0 634 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.84□□□□□ -0.03
CDH1-209ENST00000566510 ENDOVQ8N8Q3 282 aaKnown RBP14.84□□□□□ -0.03
CDH1-209ENST00000566510 DNERQ8NFT8 737 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 DTX3LQ8TDB6 740 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 FNIP1Q8TF40 1166 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 SEPT1Q8WYJ6 367 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 PEBP4Q96S96 227 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 SRPK1Q96SB4 655 aaKnown RBP14.84□□□□□ -0.03
CDH1-209ENST00000566510 PPP1R16BQ96T49 567 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 SDCBP2Q9H190 292 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 ASCC2Q9H1I8 757 aaPredicted RBP14.84□□□□□ -0.03
CDH1-209ENST00000566510 KCNK13Q9HB14 408 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 WDR35Q9P2L0 1181 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 MGAMO43451 1857 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 C19orf81C9J6K1 198 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 LMNAP02545 664 aaKnown RBP14.84□□□□□ -0.03
CDH1-209ENST00000566510 ITGB3P05106 788 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 APRTP07741 180 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 DLDP09622 509 aaKnown RBP14.84□□□□□ -0.03
CDH1-209ENST00000566510 PDGFRAP16234 1089 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 SERPINB4P48594 390 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 PTPN11Q06124 597 aaPredicted RBP14.84□□□□□ -0.03
CDH1-209ENST00000566510 MXD4Q14582 209 aaPredicted RBP14.84□□□□□ -0.03
CDH1-209ENST00000566510 PRKD1Q15139 912 aaPredicted RBP14.84□□□□□ -0.03
CDH1-209ENST00000566510 MDH1BQ5I0G3 518 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 WDR78Q5VTH9 848 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 EEF1DP3Q658K8 133 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 OR6B2Q6IFH4 312 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 SLC4A11Q8NBS3 891 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 PHACTR1Q9C0D0 580 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 RPF1Q9H9Y2 349 aaKnown RBP14.84□□□□□ -0.03
CDH1-209ENST00000566510 TEX264Q9Y6I9 313 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 NOP56O00567 594 aaKnown RBP14.83□□□□□ -0.03
CDH1-209ENST00000566510 PRPSAP2O60256 369 aa14.83□□□□□ -0.03
CDH1-209ENST00000566510 NFICP08651 508 aa14.83□□□□□ -0.03
CDH1-209ENST00000566510 SPDYAQ5MJ70 313 aa14.83□□□□□ -0.03
CDH1-209ENST00000566510 CDHR3Q6ZTQ4 885 aa14.83□□□□□ -0.03
CDH1-209ENST00000566510 ALYREFQ86V81 257 aaKnown RBP14.83□□□□□ -0.03
CDH1-209ENST00000566510 NCAPG2Q86XI2 1143 aa14.83□□□□□ -0.03
CDH1-209ENST00000566510 STMN2Q93045 179 aa14.83□□□□□ -0.03
CDH1-209ENST00000566510 PTCD3Q96EY7 689 aaKnown RBP14.83□□□□□ -0.03
CDH1-209ENST00000566510 TUBB6Q9BUF5 446 aa14.83□□□□□ -0.03
CDH1-209ENST00000566510 YIPF3Q9GZM5 350 aa14.83□□□□□ -0.03
CDH1-209ENST00000566510 MARCOQ9UEW3 520 aaPredicted RBP14.83□□□□□ -0.03
CDH1-209ENST00000566510 ZC3H7BQ9UGR2 993 aaKnown RBP14.83□□□□□ -0.03
CDH1-209ENST00000566510 I3L4J1 428 aa14.83□□□□□ -0.04
CDH1-209ENST00000566510 SMAPO00193 183 aa14.83□□□□□ -0.04
CDH1-209ENST00000566510 KRT36O76013 467 aa14.83□□□□□ -0.04
CDH1-209ENST00000566510 ATP6V1C1P21283 382 aa14.83□□□□□ -0.04
CDH1-209ENST00000566510 ETV4P43268 484 aa14.83□□□□□ -0.04
CDH1-209ENST00000566510 NEK3P51956 506 aa14.83□□□□□ -0.04
CDH1-209ENST00000566510 ZNF280AP59817 542 aaPredicted RBP14.83□□□□□ -0.04
CDH1-209ENST00000566510 TMPRSS15P98073 1019 aa14.83□□□□□ -0.04
CDH1-209ENST00000566510 BMPR2Q13873 1038 aa14.83□□□□□ -0.04
CDH1-209ENST00000566510 TAZQ16635 292 aa14.83□□□□□ -0.04
CDH1-209ENST00000566510 SLC26A11Q86WA9 606 aa14.83□□□□□ -0.04
CDH1-209ENST00000566510 ARMC2Q8NEN0 867 aa14.83□□□□□ -0.04
CDH1-209ENST00000566510 KCNN1Q92952 543 aa14.83□□□□□ -0.04
CDH1-209ENST00000566510 OXNAD1Q96HP4 312 aaPredicted RBP14.83□□□□□ -0.04
CDH1-209ENST00000566510 ANKRD27Q96NW4 1050 aa14.83□□□□□ -0.04
CDH1-209ENST00000566510 ELOVL4Q9GZR5 314 aa14.83□□□□□ -0.04
CDH1-209ENST00000566510 VPS33BQ9H267 617 aa14.83□□□□□ -0.04
CDH1-209ENST00000566510 TLE6Q9H808 572 aa14.83□□□□□ -0.04
CDH1-209ENST00000566510 GPATCH2LQ9NWQ4 482 aa14.83□□□□□ -0.04
CDH1-209ENST00000566510 ZFATQ9P243 1243 aa14.83□□□□□ -0.04
CDH1-209ENST00000566510 STOML1Q9UBI4 398 aa14.83□□□□□ -0.04
CDH1-209ENST00000566510 CORO1CQ9ULV4 474 aaPredicted RBP14.83□□□□□ -0.04
CDH1-209ENST00000566510 MAD1L1Q9Y6D9 718 aa14.83□□□□□ -0.04
CDH1-209ENST00000566510 EVPLQ92817 2033 aa14.83□□□□□ -0.04
CDH1-209ENST00000566510 DOCK1Q14185 1865 aa14.82□□□□□ -0.04
CDH1-209ENST00000566510 E5RJQ4 531 aa14.82□□□□□ -0.04
CDH1-209ENST00000566510 FCHO1O14526 889 aa14.82□□□□□ -0.04
CDH1-209ENST00000566510 RCN2Q14257 317 aa14.82□□□□□ -0.04
CDH1-209ENST00000566510 NOMO1Q15155 1222 aa14.82□□□□□ -0.04
CDH1-209ENST00000566510 ANGEL2Q5VTE6 544 aaKnown RBP14.82□□□□□ -0.04
CDH1-209ENST00000566510 TTC39BQ5VTQ0 682 aaPredicted RBP14.82□□□□□ -0.04
CDH1-209ENST00000566510 ANO7Q6IWH7 933 aa14.82□□□□□ -0.04
CDH1-209ENST00000566510 TEX9Q8N6V9 391 aa14.82□□□□□ -0.04
CDH1-209ENST00000566510 PDCD7Q8N8D1 485 aaKnown RBP14.82□□□□□ -0.04
CDH1-209ENST00000566510 C1orf127Q8N9H9 656 aa14.82□□□□□ -0.04
CDH1-209ENST00000566510 RXFP2Q8WXD0 754 aa14.82□□□□□ -0.04
CDH1-209ENST00000566510 SKA1Q96BD8 255 aa14.82□□□□□ -0.04
CDH1-209ENST00000566510 TMEM176AQ96HP8 235 aa14.82□□□□□ -0.04
CDH1-209ENST00000566510 NMUR2Q9GZQ4 415 aa14.82□□□□□ -0.04
CDH1-209ENST00000566510 TAS2R1Q9NYW7 299 aa14.82□□□□□ -0.04
CDH1-209ENST00000566510 SIX4Q9UIU6 781 aa14.82□□□□□ -0.04
CDH1-209ENST00000566510 CXorf49A8MYA2 514 aaPredicted RBP14.82□□□□□ -0.04
CDH1-209ENST00000566510 ABLIM1O14639 778 aa14.82□□□□□ -0.04
CDH1-209ENST00000566510 CAPN9O14815 690 aa14.82□□□□□ -0.04
CDH1-209ENST00000566510 NVLO15381 856 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms