RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 C12orf40Q86WS4 652 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 FUKQ8N0W3 1084 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 PHTF2Q8N3S3 785 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 KIAA0895Q8NCT3 520 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 MDGA1Q8NFP4 955 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 CCDC26Q8TAB7 109 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 SCAMP5Q8TAC9 235 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 OLIG1Q8TAK6 271 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 OVCA2Q8WZ82 227 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 DDX1Q92499 740 aaKnown RBP9.12□□□□□ -0.95
CAPN3-213ENST00000565173 TCEAL3Q969E4 200 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 PAGE5Q96GU1 130 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 SLITRK1Q96PX8 696 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 LSM14BQ9BX40 385 aaKnown RBP9.12□□□□□ -0.95
CAPN3-213ENST00000565173 KCTD10Q9H3F6 313 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 VPS45Q9NRW7 570 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 CFAP97Q9P2B7 532 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 MMP17Q9ULZ9 603 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 CNOT1A5YKK6 2376 aaKnown RBP9.12□□□□□ -0.95
CAPN3-213ENST00000565173 USP24Q9UPU5 2620 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 E2F8A0AVK6 867 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 SLC9A3R1O14745 358 aaPredicted RBP9.11□□□□□ -0.95
CAPN3-213ENST00000565173 GREM1O60565 184 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 ADAM23O75077 832 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 PHACTR2O75167 634 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 BEST1O76090 585 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 RHOBTB1O94844 696 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 RTN3O95197 1032 aaPredicted RBP9.11□□□□□ -0.95
CAPN3-213ENST00000565173 CAVIN2O95810 425 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 F13A1P00488 732 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 SLFN14P0C7P3 912 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 MBL2P11226 248 aaPredicted RBP9.11□□□□□ -0.95
CAPN3-213ENST00000565173 PDIA4P13667 645 aaKnown RBP9.11□□□□□ -0.95
CAPN3-213ENST00000565173 BCKDHBP21953 392 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 PMLP29590 882 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 KIR2DL1P43626 348 aaPredicted RBP9.11□□□□□ -0.95
CAPN3-213ENST00000565173 ME1P48163 572 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 DGKEP52429 567 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 AP3M2P53677 418 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 NCOA4Q13772 614 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 ELF2Q15723 593 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 ZNF699Q32M78 642 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 USP39Q53GS9 565 aaKnown RBP9.11□□□□□ -0.95
CAPN3-213ENST00000565173 LY6G5CQ5SRR4 150 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 C1orf220Q5T0J3 134 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 ATL3Q6DD88 541 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 FAM35AQ86V20 835 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 SLC9A9Q8IVB4 645 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 CRYBG2Q8N1P7 616 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 CCDC33Q8N5R6 958 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 ALLCQ8N6M5 410 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 IL17RCQ8NAC3 791 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 ZMIZ2Q8NF64 920 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 TSTD1Q8NFU3 115 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 GOLGA5Q8TBA6 731 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 FBXO32Q969P5 355 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 WBP2Q969T9 261 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 CNOT6LQ96LI5 555 aaKnown RBP9.11□□□□□ -0.95
CAPN3-213ENST00000565173 PNKPQ96T60 521 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 SMOQ99835 787 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 DUSP9Q99956 384 aaKnown RBP9.11□□□□□ -0.95
CAPN3-213ENST00000565173 FAM13BQ9NYF5 915 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 SERTAD1Q9UHV2 236 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 CEP295Q9C0D2 2601 aa9.11□□□□□ -0.95
CAPN3-213ENST00000565173 ABCA7Q8IZY2 2146 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 SGK1O00141 431 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 KAT7O95251 611 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 ADH5P11766 374 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 TIE1P35590 1138 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 GRIA2P42262 883 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 TNFRSF4P43489 277 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 TUBP50607 506 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 SLC5A3P53794 718 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 CREB5Q02930 508 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 DNM1Q05193 864 aaKnown RBP9.1□□□□□ -0.95
CAPN3-213ENST00000565173 IFRD2Q12894 506 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-213ENST00000565173 BIRC3Q13489 604 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 SGSM1Q2NKQ1 1148 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 ZACNQ401N2 412 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 KMT5BQ4FZB7 885 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 ZNF667Q5HYK9 610 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 HECTD3Q5T447 861 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 PMS2CLQ68D20 193 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 ANO7Q6IWH7 933 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 SCARA5Q6ZMJ2 495 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 SV2AQ7L0J3 742 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 ACOT1Q86TX2 421 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 DDX42Q86XP3 938 aaKnown RBP eCLIP9.1□□□□□ -0.95
CAPN3-213ENST00000565173 ETFBKMTQ8IXQ9 262 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 FRMD1Q8N878 549 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 C12orf29Q8N999 325 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 TXNDC5Q8NBS9 432 aaKnown RBP9.1□□□□□ -0.95
CAPN3-213ENST00000565173 PDZD8Q8NEN9 1154 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 OTUB2Q96DC9 234 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 SMARCD1Q96GM5 515 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 TNIP3Q96KP6 325 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 TPSD1Q9BZJ3 242 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 CCSER2Q9H7U1 834 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 CSNK1G1Q9HCP0 422 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 DMAP1Q9NPF5 467 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms