RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 SLC35F5Q8WV83 523 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 C18orf8Q96DM3 657 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 FUBP3Q96I24 572 aaKnown RBP eCLIP11.68□□□□□ -0.54
SF3B3-205ENST00000564899 RPGRIP1Q96KN7 1286 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 HSFY1Q96LI6 401 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 C16orf45Q96MC5 204 aaPredicted RBP11.68□□□□□ -0.54
SF3B3-205ENST00000564899 PLVAPQ9BX97 442 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 RHOBTB2Q9BYZ6 727 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 MIS12Q9H081 205 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 ZBP1Q9H171 429 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 AVENQ9NQS1 362 aaPredicted RBP11.68□□□□□ -0.54
SF3B3-205ENST00000564899 TLR9Q9NR96 1032 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 ABI2Q9NYB9 513 aaPredicted RBP11.68□□□□□ -0.54
SF3B3-205ENST00000564899 CTTNBP2NLQ9P2B4 639 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 TJP2Q9UDY2 1190 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 STRIP2Q9ULQ0 834 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 PCDHB5Q9Y5E4 795 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 CDY1Q9Y6F8 540 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 MTMR11A4FU01 709 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 E5RJQ4 531 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 BUB1O43683 1085 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 MOCS3O95396 460 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 ERBB2P04626 1255 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 RB1P06400 928 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 RPL17P18621 184 aaKnown RBP11.67□□□□□ -0.54
SF3B3-205ENST00000564899 SP100P23497 879 aaPredicted RBP11.67□□□□□ -0.54
SF3B3-205ENST00000564899 ACADSBP45954 432 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 GABRB2P47870 512 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 CACNA2D1P54289 1103 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 SNX16P57768 344 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 SMARCB1Q12824 385 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 GPR17Q13304 367 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 PTPN14Q15678 1187 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 IFI16Q16666 785 aaKnown RBP11.67□□□□□ -0.54
SF3B3-205ENST00000564899 CFAP221Q4G0U5 840 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 SLC8B1Q6J4K2 584 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 LLGL2Q6P1M3 1020 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 DNAJC24Q6P3W2 148 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 NYAP1Q6ZVC0 841 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 PIGZQ86VD9 579 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 SUGP1Q8IWZ8 645 aaKnown RBP11.67□□□□□ -0.54
SF3B3-205ENST00000564899 GPR65Q8IYL9 337 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 RNF10Q8N5U6 811 aaKnown RBP11.67□□□□□ -0.54
SF3B3-205ENST00000564899 SLC35G2Q8TBE7 412 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 ZNF564Q8TBZ8 553 aaPredicted RBP11.67□□□□□ -0.54
SF3B3-205ENST00000564899 PGLYRP2Q96PD5 576 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 ALS2CR12Q96Q35 445 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 SMOQ99835 787 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 NUP85Q9BW27 656 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 SLC4A5Q9BY07 1137 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 IRX2Q9BZI1 471 aaPredicted RBP11.67□□□□□ -0.54
SF3B3-205ENST00000564899 LMAN2LQ9H0V9 348 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 SMOC2Q9H3U7 446 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 DMAP1Q9NPF5 467 aaPredicted RBP11.67□□□□□ -0.54
SF3B3-205ENST00000564899 CYLDQ9NQC7 956 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 MRPL17Q9NRX2 175 aaKnown RBP11.67□□□□□ -0.54
SF3B3-205ENST00000564899 WDR35Q9P2L0 1181 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 CHORDC1Q9UHD1 332 aaPredicted RBP11.67□□□□□ -0.54
SF3B3-205ENST00000564899 SALL4Q9UJQ4 1053 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 SSX2IPQ9Y2D8 614 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 SCINQ9Y6U3 715 aa11.67□□□□□ -0.54
SF3B3-205ENST00000564899 NCOR2Q9Y618 2525 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 VWA8A3KMH1 1905 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 GOLGA8SH3BPF8 625 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 PIK3R2O00459 728 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 PER2O15055 1255 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 ADAM12O43184 909 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 NCK2O43639 380 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 BEST1O76090 585 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 CTSAP10619 480 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 LCP1P13796 627 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 CYP2F1P24903 491 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 AVPR2P30518 371 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 OR1D2P34982 312 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 CA8P35219 290 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 GRIK1P39086 918 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 MAGEA11P43364 429 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 GSCP56915 257 aaPredicted RBP11.66□□□□□ -0.54
SF3B3-205ENST00000564899 GNG11P61952 73 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 ROR1Q01973 937 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 CREMQ03060 361 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 ZNF268Q14587 947 aaPredicted RBP11.66□□□□□ -0.54
SF3B3-205ENST00000564899 TCEAL1Q15170 157 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 ZNF569Q5MCW4 686 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 OR6B2Q6IFH4 312 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 PLEKHA7Q6IQ23 1121 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 RNF19BQ6ZMZ0 732 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 TMC7Q7Z402 723 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 TMEM110Q86TL2 294 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 XYLT1Q86Y38 959 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 EFHBQ8N7U6 833 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 ATAD1Q8NBU5 361 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 C3orf20Q8ND61 904 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 ZMIZ2Q8NF64 920 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 SPPL2BQ8TCT7 592 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 C2orf15Q8WU43 125 aaKnown RBP11.66□□□□□ -0.54
SF3B3-205ENST00000564899 AUTS2Q8WXX7 1259 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 KCTD13Q8WZ19 329 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 KCNK16Q96T55 309 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 CLSTN3Q9BQT9 956 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms