RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 CDR2LQ86X02 465 aaPredicted RBP21.34■■□□□ 1.01
MAP1LC3B-206ENST00000564844 OR6Y1Q8NGX8 325 aa21.34■■□□□ 1.01
MAP1LC3B-206ENST00000564844 FAM81AQ8TBF8 368 aa21.34■■□□□ 1.01
MAP1LC3B-206ENST00000564844 TFAP2BQ92481 460 aa21.34■■□□□ 1.01
MAP1LC3B-206ENST00000564844 NKD2Q969F2 451 aaPredicted RBP21.34■■□□□ 1.01
MAP1LC3B-206ENST00000564844 OPTNQ96CV9 577 aa21.34■■□□□ 1.01
MAP1LC3B-206ENST00000564844 MPP4Q96JB8 637 aa21.34■■□□□ 1.01
MAP1LC3B-206ENST00000564844 CENPKQ9BS16 269 aa21.34■■□□□ 1.01
MAP1LC3B-206ENST00000564844 POLR3FQ9H1D9 316 aaPredicted RBP21.34■■□□□ 1.01
MAP1LC3B-206ENST00000564844 NXF1Q9UBU9 619 aaKnown RBP21.34■■□□□ 1.01
MAP1LC3B-206ENST00000564844 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.33■■□□□ 1.01
MAP1LC3B-206ENST00000564844 A0A0B4J269 797 aa21.33■■□□□ 1.01
MAP1LC3B-206ENST00000564844 GRAP2O75791 330 aa21.33■■□□□ 1.01
MAP1LC3B-206ENST00000564844 MMEL1Q495T6 779 aa21.33■■□□□ 1.01
MAP1LC3B-206ENST00000564844 ZNF677Q86XU0 584 aa21.33■■□□□ 1.01
MAP1LC3B-206ENST00000564844 IDI2Q9BXS1 227 aa21.33■■□□□ 1.01
MAP1LC3B-206ENST00000564844 TMX2Q9Y320 296 aa21.33■■□□□ 1.01
MAP1LC3B-206ENST00000564844 ZNF536O15090 1300 aa21.33■■□□□ 1.01
MAP1LC3B-206ENST00000564844 CAPN14A8MX76 684 aa21.33■■□□□ 1
MAP1LC3B-206ENST00000564844 ITM2AO43736 263 aa21.33■■□□□ 1
MAP1LC3B-206ENST00000564844 NCF2P19878 526 aaPredicted RBP21.33■■□□□ 1
MAP1LC3B-206ENST00000564844 CDK7P50613 346 aa21.33■■□□□ 1
MAP1LC3B-206ENST00000564844 MRPS5P82675 430 aaKnown RBP21.33■■□□□ 1
MAP1LC3B-206ENST00000564844 HIC1Q14526 733 aa21.33■■□□□ 1
MAP1LC3B-206ENST00000564844 TRMT10BQ6PF06 316 aaKnown RBP21.33■■□□□ 1
MAP1LC3B-206ENST00000564844 MARK2Q7KZI7 788 aaKnown RBP21.33■■□□□ 1
MAP1LC3B-206ENST00000564844 MYLK4Q86YV6 388 aaPredicted RBP21.33■■□□□ 1
MAP1LC3B-206ENST00000564844 HPS6Q86YV9 775 aa21.33■■□□□ 1
MAP1LC3B-206ENST00000564844 CRLF3Q8IUI8 442 aa21.33■■□□□ 1
MAP1LC3B-206ENST00000564844 SEPT12Q8IYM1 358 aa21.33■■□□□ 1
MAP1LC3B-206ENST00000564844 ST13P4Q8IZP2 240 aaPredicted RBP21.33■■□□□ 1
MAP1LC3B-206ENST00000564844 FBXL18Q96ME1 805 aa21.33■■□□□ 1
MAP1LC3B-206ENST00000564844 RMDN3Q96TC7 470 aa21.33■■□□□ 1
MAP1LC3B-206ENST00000564844 NRAPQ86VF7 1730 aa21.33■■□□□ 1
MAP1LC3B-206ENST00000564844 PMM2O15305 246 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 STAM2O75886 525 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 APRTP07741 180 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 RPL10AP62906 217 aaKnown RBP21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 SPATA24Q86W54 205 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 GDPD5Q8WTR4 605 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 SLC44A1Q8WWI5 657 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 ALKBH8Q96BT7 664 aaKnown RBP21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 PLA2G4CQ9UP65 541 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 CTDP1Q9Y5B0 961 aaPredicted RBP21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 TTLL13PA6NNM8 815 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 CREB3O43889 395 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 DHRS4L1P0CG22 281 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 HOXA10P31260 410 aaPredicted RBP21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 TNFSF9P41273 254 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 RAP1GAPP47736 663 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 RAP1GDS1P52306 607 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 C1QBPQ07021 282 aaKnown RBP21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 WDTC1Q8N5D0 677 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 DHRS4Q9BTZ2 278 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 SMYD2Q9NRG4 433 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 FBXO40Q9UH90 709 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 SLC4A7Q9Y6M7 1214 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 LRCH4O75427 683 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 CD1EP15812 388 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 USP46P62068 366 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 DLGAP5Q15398 846 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 TRMT5Q32P41 509 aaKnown RBP21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 NET1Q7Z628 596 aaPredicted RBP21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 LARGE2Q8N3Y3 721 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 NETO2Q8NC67 525 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 VCX3BQ9H321 246 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 VCX3AQ9NNX9 186 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 MAN1C1Q9NR34 630 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 IL1RAPL1Q9NZN1 696 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 FZD1Q9UP38 647 aa21.32■■□□□ 1
MAP1LC3B-206ENST00000564844 A0A088AWK7 358 aa21.31■■□□□ 1
MAP1LC3B-206ENST00000564844 MYL6P60660 151 aa21.31■■□□□ 1
MAP1LC3B-206ENST00000564844 DYNC1I2Q13409 638 aaKnown RBP21.31■■□□□ 1
MAP1LC3B-206ENST00000564844 C4orf19Q8IY42 314 aa21.31■■□□□ 1
MAP1LC3B-206ENST00000564844 PPP2R3CQ969Q6 453 aa21.31■■□□□ 1
MAP1LC3B-206ENST00000564844 HIC2Q96JB3 615 aa21.31■■□□□ 1
MAP1LC3B-206ENST00000564844 MSTO1Q9BUK6 570 aa21.31■■□□□ 1
MAP1LC3B-206ENST00000564844 MMADHCQ9H3L0 296 aaPredicted RBP21.31■■□□□ 1
MAP1LC3B-206ENST00000564844 XPNPEP1Q9NQW7 623 aa21.31■■□□□ 1
MAP1LC3B-206ENST00000564844 GPATCH2LQ9NWQ4 482 aa21.31■■□□□ 1
MAP1LC3B-206ENST00000564844 MYO18AQ92614 2054 aaKnown RBP21.31■■□□□ 1
MAP1LC3B-206ENST00000564844 CAPN8A6NHC0 703 aa21.31■■□□□ 1
MAP1LC3B-206ENST00000564844 WDR64B1ANS9 1081 aa21.31■■□□□ 1
MAP1LC3B-206ENST00000564844 KRT3P12035 628 aa21.31■■□□□ 1
MAP1LC3B-206ENST00000564844 RXRBP28702 533 aa21.31■■□□□ 1
MAP1LC3B-206ENST00000564844 MOCOSQ96EN8 888 aa21.31■■□□□ 1
MAP1LC3B-206ENST00000564844 NR1H4Q96RI1 486 aaPredicted RBP21.31■■□□□ 1
MAP1LC3B-206ENST00000564844 ZNF341Q9BYN7 854 aa21.31■■□□□ 1
MAP1LC3B-206ENST00000564844 CNTN3Q9P232 1028 aa21.31■■□□□ 1
MAP1LC3B-206ENST00000564844 ZC3H7BQ9UGR2 993 aaKnown RBP21.31■■□□□ 1
MAP1LC3B-206ENST00000564844 MAGEC1O60732 1142 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 CRADDP78560 199 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 DACT2Q5SW24 774 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 BSPRYQ5W0U4 402 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 PCGF5Q86SE9 256 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 RNF148Q8N7C7 305 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 SYTL5Q8TDW5 730 aaPredicted RBP21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 MTMR12Q9C0I1 747 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 WWP1Q9H0M0 922 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms