RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 USP22Q9UPT9 525 aa5.48□□□□□ -1.53
LINC00560-201ENST00000564593 DTNAQ9Y4J8 743 aa5.48□□□□□ -1.53
LINC00560-201ENST00000564593 DGKBQ9Y6T7 804 aa5.48□□□□□ -1.53
LINC00560-201ENST00000564593 ADM5C9JUS6 153 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 AKAP8O43823 692 aaKnown RBP5.47□□□□□ -1.53
LINC00560-201ENST00000564593 USP1O94782 785 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 VIPP01282 170 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 LMNAP02545 664 aaKnown RBP5.47□□□□□ -1.53
LINC00560-201ENST00000564593 ERBB2P04626 1255 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 NPPBP16860 134 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 YY1P25490 414 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 MTHFSP49914 203 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 NXPH1P58417 271 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 EIF2B5Q13144 721 aaKnown RBP5.47□□□□□ -1.53
LINC00560-201ENST00000564593 ATP1A4Q13733 1029 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 TUBA3CQ13748 450 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 ABLIM2Q6H8Q1 611 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 VWA1Q6PCB0 445 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 TUBA3EQ6PEY2 450 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 KCNV1Q6PIU1 500 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 RASGRP3Q8IV61 690 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 PROKR1Q8TCW9 393 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 ASB10Q8WXI3 467 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 GLG1Q92896 1179 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 ISCA1Q9BUE6 129 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 KATNAL1Q9BW62 490 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.47□□□□□ -1.53
LINC00560-201ENST00000564593 INO80BQ9C086 356 aaPredicted RBP5.47□□□□□ -1.53
LINC00560-201ENST00000564593 EPS8L2Q9H6S3 715 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 GLOD4Q9HC38 313 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 HELLSQ9NRZ9 838 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 VPS51Q9UID3 782 aa5.47□□□□□ -1.53
LINC00560-201ENST00000564593 REXO2Q9Y3B8 237 aaKnown RBP5.47□□□□□ -1.53
LINC00560-201ENST00000564593 ZAR1LA6NP61 321 aa5.46□□□□□ -1.53
LINC00560-201ENST00000564593 AGPSO00116 658 aa5.46□□□□□ -1.53
LINC00560-201ENST00000564593 ZSCAN9O15535 394 aaPredicted RBP5.46□□□□□ -1.53
LINC00560-201ENST00000564593 RHOP08100 348 aa5.46□□□□□ -1.53
LINC00560-201ENST00000564593 EGR2P11161 476 aaPredicted RBP5.46□□□□□ -1.53
LINC00560-201ENST00000564593 VEGFAP15692 232 aaPredicted RBP5.46□□□□□ -1.53
LINC00560-201ENST00000564593 CCT5P48643 541 aa5.46□□□□□ -1.53
LINC00560-201ENST00000564593 ATXN1P54253 815 aaKnown RBP5.46□□□□□ -1.53
LINC00560-201ENST00000564593 TIAL1Q01085 375 aaKnown RBP eCLIP5.46□□□□□ -1.53
LINC00560-201ENST00000564593 POSTNQ15063 836 aa5.46□□□□□ -1.53
LINC00560-201ENST00000564593 SLC9A4Q6AI14 798 aa5.46□□□□□ -1.53
LINC00560-201ENST00000564593 CLEC9AQ6UXN8 241 aa5.46□□□□□ -1.53
LINC00560-201ENST00000564593 MBD3L2Q8NHZ7 208 aaPredicted RBP5.46□□□□□ -1.53
LINC00560-201ENST00000564593 SH3RF3Q8TEJ3 882 aaPredicted RBP5.46□□□□□ -1.53
LINC00560-201ENST00000564593 FKBP10Q96AY3 582 aa5.46□□□□□ -1.53
LINC00560-201ENST00000564593 EID2BQ96D98 161 aa5.46□□□□□ -1.53
LINC00560-201ENST00000564593 PGBD1Q96JS3 809 aa5.46□□□□□ -1.53
LINC00560-201ENST00000564593 WDR11Q9BZH6 1224 aa5.46□□□□□ -1.53
LINC00560-201ENST00000564593 DRG1Q9Y295 367 aaKnown RBP5.46□□□□□ -1.53
LINC00560-201ENST00000564593 HS3ST4Q9Y661 456 aa5.46□□□□□ -1.53
LINC00560-201ENST00000564593 A1L4Q6 167 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 PIPSLA2A3N6 862 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 OR2W5A6NFC9 320 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 FCHO1O14526 889 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 YY2O15391 372 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 SLC16A3O15427 465 aaKnown RBP5.46□□□□□ -1.54
LINC00560-201ENST00000564593 PROM1O43490 865 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 VNN1O95497 513 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 NTSR2O95665 410 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 ITGA2BP08514 1039 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 DHRS4L1P0CG22 281 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 RBL1P28749 1068 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 ALDH18A1P54886 795 aaKnown RBP5.46□□□□□ -1.54
LINC00560-201ENST00000564593 POLE2P56282 527 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 TIRAPP58753 221 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 FOXE3Q13461 319 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 TBCCQ15814 346 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 TIGD6Q17RP2 521 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 TRIM71Q2Q1W2 868 aaKnown RBP5.46□□□□□ -1.54
LINC00560-201ENST00000564593 LY6G5CQ5SRR4 150 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 ABHD17BQ5VST6 288 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 SULT6B1Q6IMI4 303 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 JMJD6Q6NYC1 403 aaPredicted RBP5.46□□□□□ -1.54
LINC00560-201ENST00000564593 RHOUQ7L0Q8 258 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 MAVSQ7Z434 540 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 MRGPREQ86SM8 312 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 GALNT15Q8N3T1 639 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 FSTL5Q8N475 847 aaPredicted RBP5.46□□□□□ -1.54
LINC00560-201ENST00000564593 C11orf44Q8N8P7 122 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 ZNF503Q96F45 646 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 FBXL20Q96IG2 436 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 Q96MF0 132 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 AIFM2Q9BRQ8 373 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 VN1R3Q9BXE9 311 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 SERHL2Q9H4I8 314 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 KCTD5Q9NXV2 234 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.46□□□□□ -1.54
LINC00560-201ENST00000564593 HERC5Q9UII4 1024 aaKnown RBP5.46□□□□□ -1.54
LINC00560-201ENST00000564593 SLC27A6Q9Y2P4 619 aa5.46□□□□□ -1.54
LINC00560-201ENST00000564593 DNPH1O43598 174 aa5.45□□□□□ -1.54
LINC00560-201ENST00000564593 PEX1O43933 1283 aa5.45□□□□□ -1.54
LINC00560-201ENST00000564593 FGAP02671 866 aa5.45□□□□□ -1.54
LINC00560-201ENST00000564593 PPFIA1Q13136 1202 aa5.45□□□□□ -1.54
LINC00560-201ENST00000564593 TEDDM1Q5T9Z0 273 aa5.45□□□□□ -1.54
LINC00560-201ENST00000564593 LIN54Q6MZP7 749 aa5.45□□□□□ -1.54
LINC00560-201ENST00000564593 KLHL17Q6TDP4 642 aa5.45□□□□□ -1.54
LINC00560-201ENST00000564593 CAND1Q86VP6 1230 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms