RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 VSIG10LQ86VR7 867 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 EFCAB3Q8N7B9 438 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 NAT8LQ8N9F0 302 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 RBM15BQ8NDT2 890 aaKnown RBP12.31□□□□□ -0.44
ABCA3-203ENST00000563623 TRIM56Q9BRZ2 755 aaKnown RBP12.31□□□□□ -0.44
ABCA3-203ENST00000563623 WWP1Q9H0M0 922 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 STRIP2Q9ULQ0 834 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 SYNPO2Q9UMS6 1093 aa12.31□□□□□ -0.44
ABCA3-203ENST00000563623 UGT1A9O60656 530 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 NCF2P19878 526 aaPredicted RBP12.3□□□□□ -0.44
ABCA3-203ENST00000563623 AP2B1P63010 937 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 LRRC38Q5VT99 294 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 WDR78Q5VTH9 848 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 DRICH1Q6PGQ1 229 aaPredicted RBP12.3□□□□□ -0.44
ABCA3-203ENST00000563623 RIPOR1Q6ZS17 1223 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 BBS12Q6ZW61 710 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 LRRC71Q8N4P6 559 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 HEXIM2Q96MH2 286 aaKnown RBP12.3□□□□□ -0.44
ABCA3-203ENST00000563623 ZNF184Q99676 751 aaPredicted RBP12.3□□□□□ -0.44
ABCA3-203ENST00000563623 UGT1A7Q9HAW7 530 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 UGT1A10Q9HAW8 530 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 UGT1A8Q9HAW9 530 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 FZD1Q9UP38 647 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 LOC100653049A0A140TA62 436 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 MAGEA13PA6NCF6 341 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 TTLL13PA6NNM8 815 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 PRPSAP2O60256 369 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 KRT34O76011 436 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 RGS7P49802 495 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 RAB27AP51159 221 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 SLC18A1P54219 525 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 FKBP1AP62942 108 aaKnown RBP12.3□□□□□ -0.44
ABCA3-203ENST00000563623 TAP1Q03518 808 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 UBAP2LQ14157 1087 aaKnown RBP12.3□□□□□ -0.44
ABCA3-203ENST00000563623 TTC39BQ5VTQ0 682 aaPredicted RBP12.3□□□□□ -0.44
ABCA3-203ENST00000563623 PRAMEF18Q5VWM3 479 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 C16orf46Q6P387 395 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 CDHR3Q6ZTQ4 885 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 TMEM130Q8N3G9 435 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 SH3TC2Q8TF17 1288 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 NLRP4Q96MN2 994 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 PIH1D1Q9NWS0 290 aaKnown RBP12.3□□□□□ -0.44
ABCA3-203ENST00000563623 AHCYL1O43865 530 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 YWHAEP62258 255 aaKnown RBP12.3□□□□□ -0.44
ABCA3-203ENST00000563623 STX3Q13277 289 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 CTC1Q2NKJ3 1217 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 PPP1R15BQ5SWA1 713 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 SLC26A11Q86WA9 606 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 DEPDC1BQ8WUY9 529 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 USP18Q9UMW8 372 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 TAF1LQ8IZX4 1826 aa12.3□□□□□ -0.44
ABCA3-203ENST00000563623 FOCADQ5VW36 1801 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 A0A0B4J269 797 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 TOP3BO95985 862 aaKnown RBP12.29□□□□□ -0.44
ABCA3-203ENST00000563623 SGSM1Q2NKQ1 1148 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 SPDYE2Q495Y8 402 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 ZNF667Q5HYK9 610 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 RASSF3Q86WH2 238 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 TREML1Q86YW5 311 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 RNF149Q8NC42 400 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 AGR3Q8TD06 166 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 PYDC1Q8WXC3 89 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 GPRASP2Q96D09 838 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 PTCD3Q96EY7 689 aaKnown RBP12.29□□□□□ -0.44
ABCA3-203ENST00000563623 QTRT2Q9H974 415 aaKnown RBP12.29□□□□□ -0.44
ABCA3-203ENST00000563623 CYLDQ9NQC7 956 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 MAGED2Q9UNF1 606 aaPredicted RBP12.29□□□□□ -0.44
ABCA3-203ENST00000563623 FARP1Q9Y4F1 1045 aaPredicted RBP12.29□□□□□ -0.44
ABCA3-203ENST00000563623 PRR5-ARHGAP8B1AHC4 643 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 TRAFD1O14545 582 aaPredicted RBP12.29□□□□□ -0.44
ABCA3-203ENST00000563623 PDE5AO76074 875 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 PDGFRAP16234 1089 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 OSBPP22059 807 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 SCNN1BP51168 640 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 BCAR1P56945 870 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 ARHGAP8P85298 464 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 SLC25A3Q00325 362 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 C15orf59Q2T9L4 293 aaPredicted RBP12.29□□□□□ -0.44
ABCA3-203ENST00000563623 SH3PXD2AQ5TCZ1 1133 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 KRT27Q7Z3Y8 459 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 TMPRSS6Q8IU80 811 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 TRIM42Q8IWZ5 723 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 USP6NLQ92738 828 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 ANKRD36BP1Q96IX9 119 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 AHDC1Q5TGY3 1603 aaPredicted RBP12.29□□□□□ -0.44
ABCA3-203ENST00000563623 CXorf49A8MYA2 514 aaPredicted RBP12.29□□□□□ -0.44
ABCA3-203ENST00000563623 KRT38O76015 456 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 ASS1P00966 412 aaKnown RBP12.29□□□□□ -0.44
ABCA3-203ENST00000563623 OATP04181 439 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 DLDP09622 509 aaKnown RBP12.29□□□□□ -0.44
ABCA3-203ENST00000563623 SUPT20HL2P0C7V6 817 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 HMGCS2P54868 508 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 PRKD1Q15139 912 aaPredicted RBP12.29□□□□□ -0.44
ABCA3-203ENST00000563623 GRAMD1BQ3KR37 738 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 SUPT20HL1Q3ZLR7 823 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 SLC44A1Q8WWI5 657 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 LPAR1Q92633 364 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 CPXM1Q96SM3 734 aa12.29□□□□□ -0.44
ABCA3-203ENST00000563623 STX18Q9P2W9 335 aaKnown RBP12.29□□□□□ -0.44
ABCA3-203ENST00000563623 PLA2G6O60733 806 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 318 ms