RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ENOSF1Q7L5Y1 443 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 BHLHA9Q7RTU4 235 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 BMP8AQ7Z5Y6 402 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 SCD5Q86SK9 330 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 PIGZQ86VD9 579 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 SLC35F5Q8WV83 523 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 FBXO32Q969P5 355 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 E2F7Q96AV8 911 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 TRMT61BQ9BVS5 477 aaKnown RBP9.02□□□□□ -0.97
UBR1-204ENST00000563239 LSM14BQ9BX40 385 aaKnown RBP9.02□□□□□ -0.97
UBR1-204ENST00000563239 NAT10Q9H0A0 1025 aaKnown RBP9.02□□□□□ -0.97
UBR1-204ENST00000563239 GANQ9H2C0 597 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 CBX8Q9HC52 389 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 TRPC7Q9HCX4 862 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 PLCB1Q9NQ66 1216 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 TDP1Q9NUW8 608 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 OBP2AQ9NY56 170 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 EHD2Q9NZN4 543 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 TRPM5Q9NZQ8 1165 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 WNT16Q9UBV4 365 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 ZMYM5Q9UJ78 669 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.02□□□□□ -0.97
UBR1-204ENST00000563239 SCML2Q9UQR0 700 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 SIK3Q9Y2K2 1263 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 FHOD1Q9Y613 1164 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 TRAV19A0A0A6YYK7 116 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 LGALS16A8MUM7 142 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 XPO1O14980 1071 aaKnown RBP9.01□□□□□ -0.97
UBR1-204ENST00000563239 COCHO43405 550 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 USP17L7P0C7H9 530 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 KRT5P13647 590 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 UCHL3P15374 230 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 TCF3P15923 654 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 PFKLP17858 780 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 HDCP19113 662 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 GDI1P31150 447 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 CLCN1P35523 988 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 AVPR1AP37288 418 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 PLA2G4AP47712 749 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 RPL34P49207 117 aaKnown RBP9.01□□□□□ -0.97
UBR1-204ENST00000563239 BCAT1P54687 386 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 SLC7A9P82251 487 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 BST2Q10589 180 aaKnown RBP9.01□□□□□ -0.97
UBR1-204ENST00000563239 ZNF77Q15935 545 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 SMYD5Q6GMV2 418 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 PM20D1Q6GTS8 502 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 PMF1Q6P1K2 205 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 DENND1BQ6P3S1 775 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 CCDC186Q7Z3E2 898 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 ALYREFQ86V81 257 aaKnown RBP9.01□□□□□ -0.97
UBR1-204ENST00000563239 FAM71AQ8IYT1 594 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 SIX5Q8N196 739 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 CELF5Q8N6W0 485 aaKnown RBP9.01□□□□□ -0.97
UBR1-204ENST00000563239 PDZD8Q8NEN9 1154 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 DEPDC1BQ8WUY9 529 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 ZNF606Q8WXB4 792 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 KCTD13Q8WZ19 329 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 NDRG1Q92597 394 aaKnown RBP9.01□□□□□ -0.97
UBR1-204ENST00000563239 ZFYVE19Q96K21 471 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 ZFRQ96KR1 1074 aaKnown RBP9.01□□□□□ -0.97
UBR1-204ENST00000563239 FAM81BQ96LP2 452 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 SLITRK1Q96PX8 696 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 FAM83CQ9BQN1 747 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 DDX23Q9BUQ8 820 aaKnown RBP9.01□□□□□ -0.97
UBR1-204ENST00000563239 DNAI2Q9GZS0 605 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 FBXO44Q9H4M3 255 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 CCSER2Q9H7U1 834 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 TRPV5Q9NQA5 729 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 CYTH4Q9UIA0 394 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 KIF26AQ9ULI4 1882 aaPredicted RBP9.01□□□□□ -0.97
UBR1-204ENST00000563239 CA14Q9ULX7 337 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 ARHGAP26Q9UNA1 814 aa9.01□□□□□ -0.97
UBR1-204ENST00000563239 A0A1W2PQH9 124 aa9□□□□□ -0.97
UBR1-204ENST00000563239 OTOL1A6NHN0 477 aaPredicted RBP9□□□□□ -0.97
UBR1-204ENST00000563239 SMTNL1A8MU46 457 aa9□□□□□ -0.97
UBR1-204ENST00000563239 PES1O00541 588 aaKnown RBP9□□□□□ -0.97
UBR1-204ENST00000563239 CHADO15335 359 aa9□□□□□ -0.97
UBR1-204ENST00000563239 TEX33O43247 280 aa9□□□□□ -0.97
UBR1-204ENST00000563239 TBX18O95935 607 aa9□□□□□ -0.97
UBR1-204ENST00000563239 ABL1P00519 1130 aa9□□□□□ -0.97
UBR1-204ENST00000563239 CKMP06732 381 aa9□□□□□ -0.97
UBR1-204ENST00000563239 SETSIPP0DME0 302 aa9□□□□□ -0.97
UBR1-204ENST00000563239 CDK11BP21127 795 aaKnown RBP9□□□□□ -0.97
UBR1-204ENST00000563239 GPD2P43304 727 aa9□□□□□ -0.97
UBR1-204ENST00000563239 TUBP50607 506 aa9□□□□□ -0.97
UBR1-204ENST00000563239 TKTL1P51854 596 aa9□□□□□ -0.97
UBR1-204ENST00000563239 STARD6P59095 220 aa9□□□□□ -0.97
UBR1-204ENST00000563239 USP4Q13107 963 aa9□□□□□ -0.97
UBR1-204ENST00000563239 DRAP1Q14919 205 aaPredicted RBP9□□□□□ -0.97
UBR1-204ENST00000563239 SYCP1Q15431 976 aa9□□□□□ -0.97
UBR1-204ENST00000563239 SLC44A4Q53GD3 710 aa9□□□□□ -0.97
UBR1-204ENST00000563239 HECTD3Q5T447 861 aa9□□□□□ -0.97
UBR1-204ENST00000563239 CWF19L1Q69YN2 538 aaKnown RBP9□□□□□ -0.97
UBR1-204ENST00000563239 LUZP1Q86V48 1076 aa9□□□□□ -0.97
UBR1-204ENST00000563239 SLC47A2Q86VL8 602 aa9□□□□□ -0.97
UBR1-204ENST00000563239 WDTC1Q8N5D0 677 aa9□□□□□ -0.97
UBR1-204ENST00000563239 BPIFB1Q8TDL5 484 aa9□□□□□ -0.97
UBR1-204ENST00000563239 SH3RF2Q8TEC5 729 aa9□□□□□ -0.97
UBR1-204ENST00000563239 DNASE1L2Q92874 299 aa9□□□□□ -0.97
UBR1-204ENST00000563239 SECISBP2LQ93073 1101 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms