RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 TMEM63CQ9P1W3 806 aa17.53■□□□□ 0.4
CDT1-202ENST00000562747 DCDC2BA2VCK2 349 aa17.52■□□□□ 0.4
CDT1-202ENST00000562747 GTPBP10A4D1E9 387 aaKnown RBP17.52■□□□□ 0.4
CDT1-202ENST00000562747 HEPACAM2A8MVW5 462 aa17.52■□□□□ 0.4
CDT1-202ENST00000562747 PRKCSHP14314 528 aaPredicted RBP17.52■□□□□ 0.4
CDT1-202ENST00000562747 ADORA2BP29275 332 aa17.52■□□□□ 0.4
CDT1-202ENST00000562747 SATB1Q01826 763 aa17.52■□□□□ 0.4
CDT1-202ENST00000562747 GCNT1Q02742 428 aa17.52■□□□□ 0.4
CDT1-202ENST00000562747 LMNB2Q03252 620 aa17.52■□□□□ 0.4
CDT1-202ENST00000562747 DMWDQ09019 674 aa17.52■□□□□ 0.4
CDT1-202ENST00000562747 STX1AQ16623 288 aa17.52■□□□□ 0.4
CDT1-202ENST00000562747 MAN2A1Q16706 1144 aa17.52■□□□□ 0.4
CDT1-202ENST00000562747 PPP1R26Q5T8A7 1209 aaPredicted RBP17.52■□□□□ 0.4
CDT1-202ENST00000562747 TXNDC8Q6A555 127 aa17.52■□□□□ 0.4
CDT1-202ENST00000562747 MFSD6LQ8IWD5 586 aa17.52■□□□□ 0.4
CDT1-202ENST00000562747 MAB21L3Q8N8X9 362 aa17.52■□□□□ 0.4
CDT1-202ENST00000562747 ZMIZ2Q8NF64 920 aa17.52■□□□□ 0.4
CDT1-202ENST00000562747 OVCA2Q8WZ82 227 aa17.52■□□□□ 0.4
CDT1-202ENST00000562747 FAM3CQ92520 227 aa17.52■□□□□ 0.4
CDT1-202ENST00000562747 SECISBP2LQ93073 1101 aaKnown RBP17.52■□□□□ 0.4
CDT1-202ENST00000562747 SLITRK1Q96PX8 696 aa17.52■□□□□ 0.4
CDT1-202ENST00000562747 FAM126AQ9BYI3 521 aaPredicted RBP17.52■□□□□ 0.4
CDT1-202ENST00000562747 INTS2Q9H0H0 1204 aaKnown RBP17.52■□□□□ 0.4
CDT1-202ENST00000562747 LMAN1LQ9HAT1 526 aa17.52■□□□□ 0.4
CDT1-202ENST00000562747 TRPV5Q9NQA5 729 aa17.52■□□□□ 0.4
CDT1-202ENST00000562747 TRPM5Q9NZQ8 1165 aa17.52■□□□□ 0.4
CDT1-202ENST00000562747 GCNT4Q9P109 453 aa17.52■□□□□ 0.4
CDT1-202ENST00000562747 DPYSL4O14531 572 aa17.51■□□□□ 0.39
CDT1-202ENST00000562747 TNFRSF10BO14763 440 aa17.51■□□□□ 0.39
CDT1-202ENST00000562747 CHRNB1P11230 501 aa17.51■□□□□ 0.39
CDT1-202ENST00000562747 PFKLP17858 780 aa17.51■□□□□ 0.39
CDT1-202ENST00000562747 PTMSP20962 102 aa17.51■□□□□ 0.39
CDT1-202ENST00000562747 YWHAQP27348 245 aa17.51■□□□□ 0.39
CDT1-202ENST00000562747 AVPR1AP37288 418 aa17.51■□□□□ 0.39
CDT1-202ENST00000562747 SOX9P48436 509 aa17.51■□□□□ 0.39
CDT1-202ENST00000562747 PDE6CP51160 858 aa17.51■□□□□ 0.39
CDT1-202ENST00000562747 SLC5A3P53794 718 aa17.51■□□□□ 0.39
CDT1-202ENST00000562747 MAP3K7CLP57077 242 aa17.51■□□□□ 0.39
CDT1-202ENST00000562747 ARHGAP17Q68EM7 881 aa17.51■□□□□ 0.39
CDT1-202ENST00000562747 MAMSTRQ6ZN01 415 aa17.51■□□□□ 0.39
CDT1-202ENST00000562747 CLEC20AQ6ZU45 233 aa17.51■□□□□ 0.39
CDT1-202ENST00000562747 KIF9Q9HAQ2 790 aa17.51■□□□□ 0.39
CDT1-202ENST00000562747 PNPLA8Q9NP80 782 aa17.51■□□□□ 0.39
CDT1-202ENST00000562747 RBM12Q9NTZ6 932 aaKnown RBP17.51■□□□□ 0.39
CDT1-202ENST00000562747 IL37Q9NZH6 218 aa17.51■□□□□ 0.39
CDT1-202ENST00000562747 GMEB2Q9UKD1 530 aa17.51■□□□□ 0.39
CDT1-202ENST00000562747 CDV3Q9UKY7 258 aaKnown RBP17.51■□□□□ 0.39
CDT1-202ENST00000562747 KIAA1257Q9ULG3 409 aa17.51■□□□□ 0.39
CDT1-202ENST00000562747 NFE2L3Q9Y4A8 694 aa17.51■□□□□ 0.39
CDT1-202ENST00000562747 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.51■□□□□ 0.39
CDT1-202ENST00000562747 KIF26AQ9ULI4 1882 aaPredicted RBP17.5■□□□□ 0.39
CDT1-202ENST00000562747 ZNF638Q14966 1978 aaKnown RBP17.5■□□□□ 0.39
CDT1-202ENST00000562747 FAM92AA1XBS5 289 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 PRR5-ARHGAP8B1AHC4 643 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 KRT37O76014 449 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 BEST1O76090 585 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 EEF1GP26641 437 aaKnown RBP17.5■□□□□ 0.39
CDT1-202ENST00000562747 HOXC13P31276 330 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 ARHGAP8P85298 464 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 FCHO2Q0JRZ9 810 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 SPEM2Q0P670 501 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 TAF10Q12962 218 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 ZNF268Q14587 947 aaPredicted RBP17.5■□□□□ 0.39
CDT1-202ENST00000562747 GBP6Q6ZN66 633 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 GPIHBP1Q8IV16 184 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 ARHGEF19Q8IW93 802 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 CELF5Q8N6W0 485 aaKnown RBP17.5■□□□□ 0.39
CDT1-202ENST00000562747 PDZD8Q8NEN9 1154 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 JAKMIP2Q96AA8 810 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 FAM81BQ96LP2 452 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 TUBGCP2Q9BSJ2 902 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 DUSP16Q9BY84 665 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 FBXO44Q9H4M3 255 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 TRPC7Q9HCX4 862 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 SAMSN1Q9NSI8 373 aaKnown RBP17.5■□□□□ 0.39
CDT1-202ENST00000562747 C2orf42Q9NWW7 574 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 CACNA1BQ00975 2339 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 ANAPC1Q9H1A4 1944 aa17.5■□□□□ 0.39
CDT1-202ENST00000562747 MYH10P35580 1976 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 TRAV19A0A0A6YYK7 116 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 ZNF840PA6NDX5 716 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 KCNJ18B7U540 433 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 ZNF263O14978 683 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 PRAMEF12O95522 483 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 PAEPP09466 180 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 VDRP11473 427 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 ACO1P21399 889 aaKnown RBP17.49■□□□□ 0.39
CDT1-202ENST00000562747 CCR3P51677 355 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 IFRD2Q12894 506 aaPredicted RBP17.49■□□□□ 0.39
CDT1-202ENST00000562747 SRSF5Q13243 272 aaKnown RBP17.49■□□□□ 0.39
CDT1-202ENST00000562747 KCNJ12Q14500 433 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 EXOC3L4Q17RC7 722 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 VWA3BQ502W6 1294 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 SGO2Q562F6 1265 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 TCP11X2Q5H9J9 407 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 LAIR1Q6GTX8 287 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 CAVIN1Q6NZI2 390 aaKnown RBP17.49■□□□□ 0.39
CDT1-202ENST00000562747 TRIM65Q6PJ69 517 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 TMEM270Q6UE05 265 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 Q6ZS52 159 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms