RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 RBM12Q9NTZ6 932 aaKnown RBP7.86□□□□□ -1.15
TCF4-216ENST00000562680 RABL2AQ9UBK7 228 aaPredicted RBP7.86□□□□□ -1.15
TCF4-216ENST00000562680 UXTQ9UBK9 157 aaPredicted RBP7.86□□□□□ -1.15
TCF4-216ENST00000562680 PLAAQ9Y263 795 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 RBAK-RBAKDNI3L0D1 243 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 GPR25O00155 361 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 CTIFO43310 598 aaKnown RBP7.86□□□□□ -1.15
TCF4-216ENST00000562680 SEC31AO94979 1220 aaKnown RBP7.86□□□□□ -1.15
TCF4-216ENST00000562680 EPHB3P54753 998 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 POLE2P56282 527 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 YWHAZP63104 245 aaKnown RBP7.86□□□□□ -1.15
TCF4-216ENST00000562680 SLC6A3Q01959 620 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 ILF2Q12905 390 aaKnown RBP7.86□□□□□ -1.15
TCF4-216ENST00000562680 TMED2Q15363 201 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 C1orf228Q6PIY5 440 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 CCNI2Q6ZMN8 369 aaPredicted RBP7.86□□□□□ -1.15
TCF4-216ENST00000562680 CHSY1Q86X52 802 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 CCNJLQ8IV13 435 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 RAB3IL1Q8TBN0 382 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 DEPDC1BQ8WUY9 529 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 THOC1Q96FV9 657 aaKnown RBP7.86□□□□□ -1.15
TCF4-216ENST00000562680 FBXL18Q96ME1 805 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 PACSIN1Q9BY11 444 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 DRC3Q9H069 523 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 LHX5Q9H2C1 402 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 PDZD7Q9H5P4 517 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 WDCPQ9H6R7 721 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.86□□□□□ -1.15
TCF4-216ENST00000562680 NR2E3Q9Y5X4 410 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 OR6C75A6NL08 312 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 POMCP01189 267 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 S100BP04271 92 aaPredicted RBP7.85□□□□□ -1.15
TCF4-216ENST00000562680 CYP1A2P05177 515 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 NR1D1P20393 614 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 RAP1GAPP47736 663 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 TKTL1P51854 596 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 PRKCZQ05513 592 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 C10orf120Q5SQS8 335 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 WDR93Q6P2C0 686 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 SLC24A5Q71RS6 500 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 SLFN11Q7Z7L1 901 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 FAM172AQ8WUF8 416 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 SH3GL1Q99961 368 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 NAT9Q9BTE0 207 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 CYLDQ9NQC7 956 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 TLR8Q9NR97 1041 aaKnown RBP7.85□□□□□ -1.15
TCF4-216ENST00000562680 ARHGAP42A6NI28 874 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 KCNN4O15554 427 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 SCNN1GP51170 649 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 KCNA10Q16322 511 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 UGP2Q16851 508 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 RABGAP1LQ5R372 815 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 TIGD7Q6NT04 549 aaPredicted RBP7.85□□□□□ -1.15
TCF4-216ENST00000562680 SAPCD2Q86UD0 394 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 LZTR1Q8N653 840 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 TMCO5AQ8N6Q1 288 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 ANKRD52Q8NB46 1076 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 OR5B17Q8NGF7 314 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 LZICQ8WZA0 190 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 USP13Q92995 863 aaPredicted RBP7.85□□□□□ -1.15
TCF4-216ENST00000562680 SERPINB11Q96P15 392 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 CYTH2Q99418 400 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 SPON2Q9BUD6 331 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 FAM96AQ9H5X1 160 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 NSMCE4AQ9NXX6 385 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 PCDHA3Q9Y5H8 950 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 SIGLEC16A6NMB1 481 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 B4GALT5O43286 388 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 COL6A1P12109 1028 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 PTPN1P18031 435 aaKnown RBP7.85□□□□□ -1.15
TCF4-216ENST00000562680 TGM2P21980 687 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 CCT5P48643 541 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 CDCA2Q69YH5 1023 aaPredicted RBP7.85□□□□□ -1.15
TCF4-216ENST00000562680 KLC3Q6P597 504 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 VSIG1Q86XK7 387 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 UNC45BQ8IWX7 931 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 RIBC1Q8N443 379 aaPredicted RBP7.85□□□□□ -1.15
TCF4-216ENST00000562680 HHIPL1Q96JK4 782 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 SCYL1Q96KG9 808 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 ZNF558Q96NG5 402 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 SGIP1Q9BQI5 828 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 HTATIP2Q9BUP3 242 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 PPP1R12CQ9BZL4 782 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 SENP6Q9GZR1 1112 aaPredicted RBP7.85□□□□□ -1.15
TCF4-216ENST00000562680 IPPQ9Y573 584 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 TCHHQ07283 1943 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 ADAMTS3O15072 1205 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 GRAP2O75791 330 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 PPP1R37O75864 691 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 ACSL3O95573 720 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 C4BPAP04003 597 aaKnown RBP7.85□□□□□ -1.15
TCF4-216ENST00000562680 INHAP05111 366 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 GLI1P08151 1106 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 ELNP15502 786 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 MLH1P40692 756 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 PDIA2Q13087 525 aaKnown RBP7.85□□□□□ -1.15
TCF4-216ENST00000562680 WDR59Q6PJI9 974 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 SPOCD1Q6ZMY3 1216 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 ANKS3Q6ZW76 656 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 IRF2BP2Q7Z5L9 587 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms