RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 SCML4Q8N228 414 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 ARHGAP18Q8N392 663 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 WDTC1Q8N5D0 677 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 SLC4A5Q9BY07 1137 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 SLITRK6Q9H5Y7 841 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 CNGB3Q9NQW8 809 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 BZW2Q9Y6E2 419 aaKnown RBP17.23■□□□□ 0.35
USB1-206ENST00000562534 FBXO21O94952 628 aa17.22■□□□□ 0.35
USB1-206ENST00000562534 LSM8O95777 96 aaKnown RBP17.22■□□□□ 0.35
USB1-206ENST00000562534 ABL1P00519 1130 aa17.22■□□□□ 0.35
USB1-206ENST00000562534 MMEP08473 750 aa17.22■□□□□ 0.35
USB1-206ENST00000562534 CFHP08603 1231 aa17.22■□□□□ 0.35
USB1-206ENST00000562534 ZDHHC11BP0C7U3 371 aa17.22■□□□□ 0.35
USB1-206ENST00000562534 ASIC2Q16515 512 aa17.22■□□□□ 0.35
USB1-206ENST00000562534 TSR1Q2NL82 804 aaKnown RBP17.22■□□□□ 0.35
USB1-206ENST00000562534 TAF3Q5VWG9 929 aa17.22■□□□□ 0.35
USB1-206ENST00000562534 TRIM72Q6ZMU5 477 aa17.22■□□□□ 0.35
USB1-206ENST00000562534 MTSS1LQ765P7 747 aa17.22■□□□□ 0.35
USB1-206ENST00000562534 MAB21L3Q8N8X9 362 aa17.22■□□□□ 0.35
USB1-206ENST00000562534 E2F7Q96AV8 911 aa17.22■□□□□ 0.35
USB1-206ENST00000562534 MRFAP1L1Q96HT8 127 aa17.22■□□□□ 0.35
USB1-206ENST00000562534 SLC46A2Q9BY10 475 aa17.22■□□□□ 0.35
USB1-206ENST00000562534 ST7Q9NRC1 585 aa17.22■□□□□ 0.35
USB1-206ENST00000562534 LIMD1Q9UGP4 676 aa17.22■□□□□ 0.35
USB1-206ENST00000562534 NOCTQ9UK39 431 aaKnown RBP17.22■□□□□ 0.35
USB1-206ENST00000562534 MYH10P35580 1976 aa17.22■□□□□ 0.35
USB1-206ENST00000562534 EYSQ5T1H1 3165 aa17.22■□□□□ 0.35
USB1-206ENST00000562534 DOCK6Q96HP0 2047 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 NOTCH4Q99466 2003 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 GYPCP04921 128 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 USP17L7P0C7H9 530 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 LCP1P13796 627 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 HDCP19113 662 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 SP100P23497 879 aaPredicted RBP17.21■□□□□ 0.35
USB1-206ENST00000562534 CASP14P31944 242 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 CDH5P33151 784 aaPredicted RBP17.21■□□□□ 0.35
USB1-206ENST00000562534 AVPR1AP37288 418 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 PRKCIP41743 596 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 RGS7P49802 495 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 ZNF75DP51815 510 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 CYP4F8P98187 520 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 TXNDC8Q6A555 127 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 PASD1Q8IV76 773 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 CMTM8Q8IZV2 173 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 GJD3Q8N144 294 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 ZNF276Q8N554 614 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 IRGQQ8WZA9 623 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 SMARCD2Q92925 531 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 PPP1R13BQ96KQ4 1090 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 ZSWIM3Q96MP5 696 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 AGPAT1Q99943 283 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 MIS12Q9H081 205 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 TRPV4Q9HBA0 871 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 CLIC5Q9NZA1 410 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 IGSF9Q9P2J2 1179 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 PRUNE2Q8WUY3 3088 aa17.21■□□□□ 0.35
USB1-206ENST00000562534 TRAV19A0A0A6YYK7 116 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 SART1O43290 800 aaKnown RBP17.2■□□□□ 0.34
USB1-206ENST00000562534 TADA3O75528 432 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 RALAP11233 206 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 CHRNB2P17787 502 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 TNFAIP3P21580 790 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 TUBP50607 506 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 KLHL30Q0D2K2 578 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 ADIGQ0VDE8 80 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 PDCLQ13371 301 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 FAM78AQ5JUQ0 283 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 HECTD3Q5T447 861 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 TADA2BQ86TJ2 420 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 ARID3BQ8IVW6 561 aaPredicted RBP17.2■□□□□ 0.34
USB1-206ENST00000562534 SCUBE3Q8IX30 993 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 DRC7Q8IY82 874 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 MSANTD4Q8NCY6 345 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 OR8K1Q8NGG5 319 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 ZSCAN18Q8TBC5 510 aaPredicted RBP17.2■□□□□ 0.34
USB1-206ENST00000562534 ADAMTS19Q8TE59 1207 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 SLC20A1Q8WUM9 679 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 ASB16Q96NS5 453 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 CDK5RAP1Q96SZ6 601 aaKnown RBP17.2■□□□□ 0.34
USB1-206ENST00000562534 ULBP1Q9BZM6 244 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 ZFP14Q9HCL3 533 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 GMIPQ9P107 970 aa17.2■□□□□ 0.34
USB1-206ENST00000562534 ANHXE9PGG2 379 aa17.19■□□□□ 0.34
USB1-206ENST00000562534 NRG2O14511 850 aaPredicted RBP17.19■□□□□ 0.34
USB1-206ENST00000562534 GABBR2O75899 941 aa17.19■□□□□ 0.34
USB1-206ENST00000562534 CYP1A1P04798 512 aaPredicted RBP17.19■□□□□ 0.34
USB1-206ENST00000562534 FMO1Q01740 532 aa17.19■□□□□ 0.34
USB1-206ENST00000562534 STXBP5Q5T5C0 1151 aa17.19■□□□□ 0.34
USB1-206ENST00000562534 POTEHQ6S545 545 aa17.19■□□□□ 0.34
USB1-206ENST00000562534 ERICH1Q86X53 443 aa17.19■□□□□ 0.34
USB1-206ENST00000562534 GOLGA1Q92805 767 aa17.19■□□□□ 0.34
USB1-206ENST00000562534 CYP2S1Q96SQ9 504 aa17.19■□□□□ 0.34
USB1-206ENST00000562534 HAUS4Q9H6D7 363 aa17.19■□□□□ 0.34
USB1-206ENST00000562534 SYNCQ9H7C4 482 aa17.19■□□□□ 0.34
USB1-206ENST00000562534 TRPC7Q9HCX4 862 aa17.19■□□□□ 0.34
USB1-206ENST00000562534 ZNHIT6Q9NWK9 470 aaKnown RBP17.19■□□□□ 0.34
USB1-206ENST00000562534 CYTH4Q9UIA0 394 aa17.19■□□□□ 0.34
USB1-206ENST00000562534 NAGPAQ9UK23 515 aa17.19■□□□□ 0.34
USB1-206ENST00000562534 GREB1Q4ZG55 1949 aa17.19■□□□□ 0.34
USB1-206ENST00000562534 A0A1W2PQH9 124 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms