RNA–Protein interactions for RNA: ENST00000562363.5

SCAMP2-202, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-202ENST00000562363 SLITRK1Q96PX8 696 aa12.3□□□□□ -0.44
SCAMP2-202ENST00000562363 MRPL45Q9BRJ2 306 aaKnown RBP12.3□□□□□ -0.44
SCAMP2-202ENST00000562363 TMEM30AQ9NV96 361 aa12.3□□□□□ -0.44
SCAMP2-202ENST00000562363 MSRB2Q9Y3D2 182 aa12.3□□□□□ -0.44
SCAMP2-202ENST00000562363 NME7Q9Y5B8 376 aa12.3□□□□□ -0.44
SCAMP2-202ENST00000562363 CLIC4Q9Y696 253 aa12.3□□□□□ -0.44
SCAMP2-202ENST00000562363 A0A0A0MRY4 1105 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 VPS37CA5D8V6 355 aaPredicted RBP12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 ZNF233A6NK53 670 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 KIAA0391O15091 583 aaKnown RBP12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 AP5Z1O43299 807 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 HOXD12P35452 270 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 STAT6P42226 847 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 TNFRSF4P43489 277 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 RPL6Q02878 288 aaKnown RBP12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 GAD2Q05329 585 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 RING1Q06587 406 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 SURF1Q15526 300 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 DUOXA2Q1HG44 320 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 WDR49Q8IV35 697 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 HDDC3Q8N4P3 179 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 DEFB119Q8N690 84 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 ZNF513Q8N8E2 541 aaPredicted RBP12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 GLIS3Q8NEA6 775 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 OR6B3Q8NGW1 331 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 CLIC6Q96NY7 704 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 ZNF518BQ9C0D4 1074 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 ELOVL4Q9GZR5 314 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 SNX25Q9H3E2 840 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 DPEP3Q9H4B8 488 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 PANK4Q9NVE7 773 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 CALCOCO1Q9P1Z2 691 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 TBC1D14Q9P2M4 693 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 SLC6A14Q9UN76 642 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 LHX6Q9UPM6 363 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 SRPRBQ9Y5M8 271 aaKnown RBP12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 ANKRD11Q6UB99 2663 aaPredicted RBP12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 PCDH15Q96QU1 1955 aa12.29□□□□□ -0.44
SCAMP2-202ENST00000562363 E2F8A0AVK6 867 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 TBC1D3BA6NDS4 549 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 UPK3BL1B0FP48 263 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 UPK3BL2E5RIL1 263 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 OPHN1O60890 802 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 TACC1O75410 805 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 HOXB2P14652 356 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 GABRG2P18507 467 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 YWHAQP27348 245 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 GFPT1Q06210 699 aaPredicted RBP12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 ACAP1Q15027 740 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 DUOXA1Q1HG43 343 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 C10orf76Q5T2E6 689 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 BTBD8Q5XKL5 378 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 CCDC73Q6ZRK6 1079 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 TRAPPC11Q7Z392 1133 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 TRMT11Q7Z4G4 463 aaKnown RBP12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 ETFBKMTQ8IXQ9 262 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 MINDY1Q8N5J2 469 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 NAT16Q8N8M0 369 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 PDZD8Q8NEN9 1154 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 OR2I1PQ8NGU4 316 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 CEP76Q8TAP6 659 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 FBXO32Q969P5 355 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 ZFRQ96KR1 1074 aaKnown RBP12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 CAPN10Q9HC96 672 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 HSPBP1Q9NZL4 362 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 SH3BP1Q9Y3L3 701 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 ADAMTS9Q9P2N4 1935 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 ITPR1Q14643 2758 aa12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 DSPP15924 2871 aaKnown RBP12.28□□□□□ -0.44
SCAMP2-202ENST00000562363 MYOFQ9NZM1 2061 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 H0Y626 953 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 CLDN5O00501 218 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 HOXC11O43248 304 aaPredicted RBP12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 COCHO43405 550 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 TULP3O75386 442 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 TRIM16O95361 564 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 SERPINF2P08697 491 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 DLATP10515 647 aaKnown RBP12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 PTPN1P18031 435 aaKnown RBP12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 GNL1P36915 607 aaPredicted RBP12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 WASP42768 502 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 TNNC1P63316 161 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 FAM193AP78312 1265 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 ANO4Q32M45 955 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 LRSAM1Q6UWE0 723 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 SLC36A4Q6YBV0 504 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 STXBP4Q6ZWJ1 553 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 RABEPKQ7Z6M1 372 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 BBS7Q8IWZ6 715 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 CCDC65Q8IXS2 484 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 TERB1Q8NA31 727 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 HPS3Q969F9 1004 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 OTUB2Q96DC9 234 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 B3GNT5Q9BYG0 378 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 PANK2Q9BZ23 570 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 DEC1Q9P2X7 70 aa12.27□□□□□ -0.45
SCAMP2-202ENST00000562363 FASNP49327 2511 aaKnown RBP12.26□□□□□ -0.45
SCAMP2-202ENST00000562363 A0A087X0B3 334 aa12.26□□□□□ -0.45
SCAMP2-202ENST00000562363 IGHV1OR15-9A0A0B4J2B8 117 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms