RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 SYT1P21579 422 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 FBLN1P23142 703 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 IL32P24001 234 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 HOXD13P35453 343 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 EIF1AXP47813 144 aaKnown RBP5.78□□□□□ -1.48
CAPN3-211ENST00000562199 CPT1AP50416 773 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 NR1H2P55055 460 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 CARD18P57730 90 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 VBP1P61758 197 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 POLR2GP62487 172 aaKnown RBP eCLIP5.78□□□□□ -1.48
CAPN3-211ENST00000562199 KRT85P78386 507 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 OTUD4Q01804 1114 aaKnown RBP5.78□□□□□ -1.48
CAPN3-211ENST00000562199 ROR2Q01974 943 aaKnown RBP5.78□□□□□ -1.48
CAPN3-211ENST00000562199 PRKCZQ05513 592 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 BFSP1Q12934 665 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 CBX3Q13185 183 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 EFTUD2Q15029 972 aaKnown RBP eCLIP5.78□□□□□ -1.48
CAPN3-211ENST00000562199 RRS1Q15050 365 aaKnown RBP5.78□□□□□ -1.48
CAPN3-211ENST00000562199 PTPAQ15257 358 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 MOGQ16653 247 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 MDH1BQ5I0G3 518 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 CFAP157Q5JU67 520 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 HABP4Q5JVS0 413 aaKnown RBP5.78□□□□□ -1.48
CAPN3-211ENST00000562199 GRTP1Q5TC63 336 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 ATL3Q6DD88 541 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 SULT6B1Q6IMI4 303 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 PAPD4Q6PIY7 484 aaKnown RBP5.78□□□□□ -1.48
CAPN3-211ENST00000562199 B3GNT9Q6UX72 402 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 GPR142Q7Z601 462 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 ZDHHC13Q8IUH4 622 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 MAML2Q8IZL2 1156 aaPredicted RBP5.78□□□□□ -1.48
CAPN3-211ENST00000562199 C17orf53Q8N3J3 647 aaPredicted RBP5.78□□□□□ -1.48
CAPN3-211ENST00000562199 OR2C3Q8N628 320 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 EFHBQ8N7U6 833 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 IQUBQ8NA54 791 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 RBBP8NLQ8NC74 664 aaPredicted RBP5.78□□□□□ -1.48
CAPN3-211ENST00000562199 ETNPPLQ8TBG4 499 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 CAGE1Q8TC20 777 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 ZNF507Q8TCN5 953 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 SPPL3Q8TCT6 385 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 SLC5A11Q8WWX8 675 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 KAT2BQ92831 832 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 RILPL2Q969X0 211 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 MSANTD3Q96H12 275 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 FUBP3Q96I24 572 aaKnown RBP eCLIP5.78□□□□□ -1.48
CAPN3-211ENST00000562199 C7orf34Q96L11 122 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 AK8Q96MA6 479 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 RIPOR3Q96MK2 946 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 PRICKLE1Q96MT3 831 aaPredicted RBP5.78□□□□□ -1.48
CAPN3-211ENST00000562199 CLUHP3Q96NS8 147 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 ALS2CR12Q96Q35 445 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 NR1H4Q96RI1 486 aaPredicted RBP5.78□□□□□ -1.48
CAPN3-211ENST00000562199 CSRNP1Q96S65 589 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 OSBPL9Q96SU4 736 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 SECISBP2Q96T21 854 aaKnown RBP5.78□□□□□ -1.48
CAPN3-211ENST00000562199 ATP6V0BQ99437 205 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 AIFM2Q9BRQ8 373 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 NTMT1Q9BV86 223 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 LSG1Q9H089 658 aaKnown RBP5.78□□□□□ -1.48
CAPN3-211ENST00000562199 THAP9Q9H5L6 903 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 GDAP2Q9NXN4 497 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 GPRC5BQ9NZH0 403 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 AKAP7Q9P0M2 348 aaPredicted RBP5.78□□□□□ -1.48
CAPN3-211ENST00000562199 COX16Q9P0S2 106 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 ORC3Q9UBD5 711 aaPredicted RBP5.78□□□□□ -1.48
CAPN3-211ENST00000562199 POLIQ9UNA4 740 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 MTMR6Q9Y217 621 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 ASB3Q9Y575 518 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 CAPN7Q9Y6W3 813 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 SBNO1A3KN83 1393 aa5.78□□□□□ -1.48
CAPN3-211ENST00000562199 ATP8B3O60423 1300 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 TTC21AQ8NDW8 1320 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 USP6P35125 1406 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 PTPRUQ92729 1446 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 A0A087WV62 115 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 CYP3A7-CYP3A51PA0A087WV96 503 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 PNMA6EA0A0J9YXQ4 647 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 LOC105371267A0A1B0GV96 52 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 A0A1W2PPL8 197 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 HEATR9A2RTY3 570 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 LCHNA4D1U4 455 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 PMS2P1A4D2B8 440 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 GOLGA6L9A6NEM1 432 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 DCDC2CA8MYV0 355 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 GPR89AB7ZAQ6 455 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 KPNA5O15131 536 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 NCK2O43639 380 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 PEX1O43933 1283 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 ADCY3O60266 1144 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 KLHL18O94889 574 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 SLU7O95391 586 aaKnown RBP5.77□□□□□ -1.49
CAPN3-211ENST00000562199 RB1P06400 928 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 GPR89BP0CG08 455 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 SRGAP2CP0DJJ0 459 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 CKMT1AP12532 417 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 PTPN2P17706 415 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 ABCB4P21439 1286 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 S100A1P23297 94 aa5.77□□□□□ -1.49
CAPN3-211ENST00000562199 CFL1P23528 166 aaKnown RBP5.77□□□□□ -1.49
CAPN3-211ENST00000562199 CCND1P24385 295 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms