RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 TTLL2Q9BWV7 592 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 LSM14BQ9BX40 385 aaKnown RBP10.68□□□□□ -0.7
HERC1-212ENST00000561348 RNF38Q9H0F5 515 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 TRPV4Q9HBA0 871 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 LRRC4Q9HBW1 653 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 TLR8Q9NR97 1041 aaKnown RBP10.68□□□□□ -0.7
HERC1-212ENST00000561348 ST7Q9NRC1 585 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 CFAP97Q9P2B7 532 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 ZMYM5Q9UJ78 669 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 SIT1Q9Y3P8 196 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 WNT6Q9Y6F9 365 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 COL4A3Q01955 1670 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 GREB1Q4ZG55 1949 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 TICRRQ7Z2Z1 1910 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 OBSL1O75147 1896 aa10.68□□□□□ -0.7
HERC1-212ENST00000561348 DENND4CQ5VZ89 1909 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 A0A1W2PQH9 124 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 BECN2A8MW95 431 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 TULP2O00295 520 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 TNFRSF10BO14763 440 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 MDM4O15151 490 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 CHADO15335 359 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 HMBSP08397 361 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 PNMA6AP0CW24 399 aaPredicted RBP10.67□□□□□ -0.7
HERC1-212ENST00000561348 ARSAP15289 507 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 EEF1GP26641 437 aaKnown RBP10.67□□□□□ -0.7
HERC1-212ENST00000561348 PPP3CCP48454 512 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 TKTL1P51854 596 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 BCAT1P54687 386 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 MCCD1P59942 119 aaPredicted RBP10.67□□□□□ -0.7
HERC1-212ENST00000561348 GCNT1Q02742 428 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 MTF1Q14872 753 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 KRT31Q15323 416 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 CT47A1Q5JQC4 288 aaPredicted RBP10.67□□□□□ -0.7
HERC1-212ENST00000561348 C10orf120Q5SQS8 335 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 FKBP15Q5T1M5 1219 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 ZNF852Q6ZMS4 543 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 RSRC2Q7L4I2 434 aaKnown RBP10.67□□□□□ -0.7
HERC1-212ENST00000561348 BMP8AQ7Z5Y6 402 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 TTC30AQ86WT1 665 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 SIX6OS1Q8N1H7 587 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 TMEM105Q8N8V8 129 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 ANKRD52Q8NB46 1076 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 TFAP2BQ92481 460 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 FAXDC2Q96IV6 333 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 CEP295NLQ96MC4 621 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 PDCL3Q9H2J4 239 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 KIF9Q9HAQ2 790 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 CSNK1G1Q9HCP0 422 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 ACP6Q9NPH0 428 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 DUS2Q9NX74 493 aaKnown RBP10.67□□□□□ -0.7
HERC1-212ENST00000561348 APEX2Q9UBZ4 518 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 DNAJC12Q9UKB3 198 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 SH3BP1Q9Y3L3 701 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 MTF2Q9Y483 593 aaPredicted RBP10.67□□□□□ -0.7
HERC1-212ENST00000561348 MYO16Q9Y6X6 1858 aa10.67□□□□□ -0.7
HERC1-212ENST00000561348 NUP210Q8TEM1 1887 aaPredicted RBP10.66□□□□□ -0.7
HERC1-212ENST00000561348 KANSL1LA0AUZ9 987 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 LEFTY2O00292 366 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 PMM2O15305 246 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 COCHO43405 550 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 TLR5O60602 858 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 TBX18O95935 607 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 PAEPP09466 180 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 RARGP13631 454 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 PTMSP20962 102 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 GNA15P30679 374 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 PGFP49763 221 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 ADIGQ0VDE8 80 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 BST2Q10589 180 aaKnown RBP10.66□□□□□ -0.7
HERC1-212ENST00000561348 ARHGAP17Q68EM7 881 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 CWF19L1Q69YN2 538 aaKnown RBP10.66□□□□□ -0.7
HERC1-212ENST00000561348 MIB1Q86YT6 1006 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 PASD1Q8IV76 773 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 FAM3CQ92520 227 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 DNASE1L2Q92874 299 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 SECISBP2LQ93073 1101 aaKnown RBP10.66□□□□□ -0.7
HERC1-212ENST00000561348 ULBP1Q9BZM6 244 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 MIS12Q9H081 205 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 LINC00597Q9H2U6 94 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 FAM207AQ9NSI2 230 aaPredicted RBP10.66□□□□□ -0.7
HERC1-212ENST00000561348 RASAL2Q9UJF2 1139 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 KIAA1257Q9ULG3 409 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 MRPS17Q9Y2R5 130 aaKnown RBP10.66□□□□□ -0.7
HERC1-212ENST00000561348 ANAPC1Q9H1A4 1944 aa10.66□□□□□ -0.7
HERC1-212ENST00000561348 ZDBF2Q9HCK1 2354 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 HHLA1C9JL84 531 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 O00370 1275 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 XPO1O14980 1071 aaKnown RBP10.65□□□□□ -0.7
HERC1-212ENST00000561348 MED7O43513 233 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 RALAP11233 206 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 AOC1P19801 751 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 ATP5C1P36542 298 aaKnown RBP10.65□□□□□ -0.7
HERC1-212ENST00000561348 KLK7P49862 253 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 ZNF165P49910 485 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 CLCN5P51795 746 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 KIF11P52732 1056 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 COPB1P53618 953 aaKnown RBP10.65□□□□□ -0.7
HERC1-212ENST00000561348 PLCB2Q00722 1185 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 UBXN1Q04323 297 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms