RNA–Protein interactions for RNA: ENST00000561239.6

SHF-210, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3

Gene SHF, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-210ENST00000561239 CLEC20AQ6ZU45 233 aa14.32□□□□□ -0.12
SHF-210ENST00000561239 ANKRD20A12PQ8NF67 263 aa14.32□□□□□ -0.12
SHF-210ENST00000561239 OVCA2Q8WZ82 227 aa14.32□□□□□ -0.12
SHF-210ENST00000561239 ERGIC2Q96RQ1 377 aa14.32□□□□□ -0.12
SHF-210ENST00000561239 KCNK16Q96T55 309 aa14.32□□□□□ -0.12
SHF-210ENST00000561239 ZSWIM1Q9BR11 485 aa14.32□□□□□ -0.12
SHF-210ENST00000561239 GANQ9H2C0 597 aa14.32□□□□□ -0.12
SHF-210ENST00000561239 TRPC7Q9HCX4 862 aa14.32□□□□□ -0.12
SHF-210ENST00000561239 PNPLA8Q9NP80 782 aa14.32□□□□□ -0.12
SHF-210ENST00000561239 LTB4R2Q9NPC1 389 aa14.32□□□□□ -0.12
SHF-210ENST00000561239 RTN4Q9NQC3 1192 aaKnown RBP14.32□□□□□ -0.12
SHF-210ENST00000561239 HEBP1Q9NRV9 189 aa14.32□□□□□ -0.12
SHF-210ENST00000561239 KRT82Q9NSB4 513 aa14.32□□□□□ -0.12
SHF-210ENST00000561239 ZNF318Q5VUA4 2279 aa14.32□□□□□ -0.12
SHF-210ENST00000561239 GREB1Q4ZG55 1949 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 A0A1B0GTH6 734 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 O00370 1275 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 TADA3O75528 432 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 AP1G2O75843 785 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 PRAMEF12O95522 483 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 CKMP06732 381 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 VDRP11473 427 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 CDK11BP21127 795 aaKnown RBP14.31□□□□□ -0.12
SHF-210ENST00000561239 YWHAQP27348 245 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 USP46P62068 366 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 AMPD2Q01433 879 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 NHLH1Q02575 133 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 TCF15Q12870 199 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 PKDCCQ504Y2 493 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 RBBP8NLQ8NC74 664 aaPredicted RBP14.31□□□□□ -0.12
SHF-210ENST00000561239 STKLD1Q8NE28 680 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 TFAP2BQ92481 460 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 ATOH1Q92858 354 aaPredicted RBP14.31□□□□□ -0.12
SHF-210ENST00000561239 RSPRY1Q96DX4 576 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 HEXIM2Q96MH2 286 aaKnown RBP14.31□□□□□ -0.12
SHF-210ENST00000561239 DUSP16Q9BY84 665 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 FOXQ1Q9C009 403 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 DNAJC12Q9UKB3 198 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 PCDHB4Q9Y5E5 795 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 PIAS3Q9Y6X2 628 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 PATJQ8NI35 1801 aa14.31□□□□□ -0.12
SHF-210ENST00000561239 NUP210Q8TEM1 1887 aaPredicted RBP14.31□□□□□ -0.12
SHF-210ENST00000561239 ARNTLO00327 626 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 EPHB6O15197 1021 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 DCNP07585 359 aaKnown RBP14.3□□□□□ -0.12
SHF-210ENST00000561239 TPM2P07951 284 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 FAM200BP0CF97 657 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 UCHL3P15374 230 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 HDCP19113 662 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 ADORA2BP29275 332 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 KLK7P49862 253 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 PDGFRLQ15198 375 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 SGO2Q562F6 1265 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 FKBP15Q5T1M5 1219 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 LCLAT1Q6UWP7 414 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 TTC30AQ86WT1 665 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 RALGPS2Q86X27 583 aaPredicted RBP14.3□□□□□ -0.12
SHF-210ENST00000561239 FAM71AQ8IYT1 594 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 KIAA1958Q8N8K9 716 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 ANKRD52Q8NB46 1076 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 FAM3CQ92520 227 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 USP13Q92995 863 aaPredicted RBP14.3□□□□□ -0.12
SHF-210ENST00000561239 EXOC4Q96A65 974 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 IER2Q9BTL4 223 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 LSM14BQ9BX40 385 aaKnown RBP14.3□□□□□ -0.12
SHF-210ENST00000561239 UBXN6Q9BZV1 441 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 FBXO44Q9H4M3 255 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 DAAM1Q9Y4D1 1078 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 FHOD1Q9Y613 1164 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 ZDBF2Q9HCK1 2354 aa14.3□□□□□ -0.12
SHF-210ENST00000561239 ZNF840PA6NDX5 716 aa14.29□□□□□ -0.12
SHF-210ENST00000561239 TEX33O43247 280 aa14.29□□□□□ -0.12
SHF-210ENST00000561239 ABL1P00519 1130 aa14.29□□□□□ -0.12
SHF-210ENST00000561239 TCF3P15923 654 aa14.29□□□□□ -0.12
SHF-210ENST00000561239 RPS9P46781 194 aaKnown RBP14.29□□□□□ -0.12
SHF-210ENST00000561239 MAP3K7CLP57077 242 aa14.29□□□□□ -0.12
SHF-210ENST00000561239 SLC8A3P57103 927 aa14.29□□□□□ -0.12
SHF-210ENST00000561239 TAF10Q12962 218 aa14.29□□□□□ -0.12
SHF-210ENST00000561239 SYCP1Q15431 976 aa14.29□□□□□ -0.12
SHF-210ENST00000561239 CNGA2Q16280 664 aa14.29□□□□□ -0.12
SHF-210ENST00000561239 MEA1Q16626 185 aa14.29□□□□□ -0.12
SHF-210ENST00000561239 ITPRIPL2Q3MIP1 535 aa14.29□□□□□ -0.12
SHF-210ENST00000561239 GPIHBP1Q8IV16 184 aa14.29□□□□□ -0.12
SHF-210ENST00000561239 FBXO32Q969P5 355 aa14.29□□□□□ -0.12
SHF-210ENST00000561239 NAP1L5Q96NT1 182 aaPredicted RBP14.29□□□□□ -0.12
SHF-210ENST00000561239 LRRC3BQ96PB8 259 aa14.29□□□□□ -0.12
SHF-210ENST00000561239 SMG9Q9H0W8 520 aaKnown RBP14.29□□□□□ -0.12
SHF-210ENST00000561239 TSPY26PQ9H489 355 aa14.29□□□□□ -0.12
SHF-210ENST00000561239 TSPAN16Q9UKR8 245 aa14.29□□□□□ -0.12
SHF-210ENST00000561239 ARHGAP26Q9UNA1 814 aa14.29□□□□□ -0.12
SHF-210ENST00000561239 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.29□□□□□ -0.12
SHF-210ENST00000561239 NCANO14594 1321 aa14.29□□□□□ -0.12
SHF-210ENST00000561239 H0Y858 1186 aa14.28□□□□□ -0.12
SHF-210ENST00000561239 FOXN3O00409 490 aaPredicted RBP14.28□□□□□ -0.12
SHF-210ENST00000561239 PES1O00541 588 aaKnown RBP14.28□□□□□ -0.12
SHF-210ENST00000561239 ZDHHC11BP0C7U3 371 aa14.28□□□□□ -0.12
SHF-210ENST00000561239 CD72P21854 359 aa14.28□□□□□ -0.12
SHF-210ENST00000561239 SLC5A3P53794 718 aa14.28□□□□□ -0.12
SHF-210ENST00000561239 JAM2P57087 298 aa14.28□□□□□ -0.12
SHF-210ENST00000561239 UBXN1Q04323 297 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms