RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 KLHL35Q6PF15 583 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 CRELD2Q6UXH1 353 aaPredicted RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 CEP128Q6ZU80 1094 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 UBE3BQ7Z3V4 1068 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 KRT27Q7Z3Y8 459 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 ADCK2Q7Z695 626 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 ANKS1BQ7Z6G8 1248 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 ADCK1Q86TW2 530 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 ZC3H18Q86VM9 953 aaKnown RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 MICU3Q86XE3 530 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 DZIP1Q86YF9 867 aaKnown RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 RTKN2Q8IZC4 609 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 SPARTQ8N0X7 666 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 FSTL5Q8N475 847 aaPredicted RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 LRRC71Q8N4P6 559 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 OTUD6BQ8N6M0 293 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 ZNF366Q8N895 744 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 DCBLD1Q8N8Z6 715 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 SYT2Q8N9I0 419 aaPredicted RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 POC5Q8NA72 575 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 NETO2Q8NC67 525 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 TNIP2Q8NFZ5 429 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 OR7D4Q8NG98 312 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 OR5AN1Q8NGI8 311 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 OR56A3Q8NH54 315 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 KIF18AQ8NI77 898 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 IFI44Q8TCB0 444 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 CREB3L4Q8TEY5 395 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 GRK7Q8WTQ7 553 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 SNX33Q8WV41 574 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 STON2Q8WXE9 905 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 CLEC4DQ8WXI8 215 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 MRPS27Q92552 414 aaKnown RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 KRT35Q92764 455 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 FAM162AQ96A26 154 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 MOAP1Q96BY2 351 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 FOXRED1Q96CU9 486 aaPredicted RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 CDCA5Q96FF9 252 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 TOE1Q96GM8 510 aaKnown RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 REXO5Q96IC2 774 aaKnown RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 BTBD6Q96KE9 485 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 HSPA12BQ96MM6 686 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 CMTM3Q96MX0 182 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 WDR92Q96MX6 357 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 BTBD2Q9BX70 525 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 CPEB1Q9BZB8 566 aaKnown RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 KLHL4Q9C0H6 718 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 TWSG1Q9GZX9 223 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 DUSP15Q9H1R2 295 aaPredicted RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 OR10A5Q9H207 317 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 ABCG8Q9H221 673 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 C1orf21Q9H246 121 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 SLC25A32Q9H2D1 315 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 MUC13Q9H3R2 512 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 RWDD1Q9H446 243 aaPredicted RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 FAM83DQ9H4H8 585 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 CCDC134Q9H6E4 229 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 C17orf75Q9HAS0 396 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 SMURF2Q9HAU4 748 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 BRF2Q9HAW0 419 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 PDE7BQ9NP56 450 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 SLC39A2Q9NP94 309 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 G6PC2Q9NQR9 355 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 TLR9Q9NR96 1032 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 RRP7BPQ9NSQ0 103 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 GIMAP4Q9NUV9 329 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 RLIMQ9NVW2 624 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 AKAP7Q9P0M2 348 aaPredicted RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 IMPACTQ9P2X3 320 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 XPR1Q9UBH6 696 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 LPAR3Q9UBY5 353 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 CTNNA3Q9UI47 895 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 SCOCQ9UIL1 159 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 ZNF112Q9UJU3 913 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 KCND3Q9UK17 655 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 DAPP1Q9UN19 280 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 DUSP12Q9UNI6 340 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 ANGEL1Q9UNK9 670 aaKnown RBP2.19□□□□□ -2.06
RTF1-207ENST00000561076 HDAC5Q9UQL6 1122 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 HPSEQ9Y251 543 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 KCNE2Q9Y6J6 123 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 PIAS3Q9Y6X2 628 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 LMTK3Q96Q04 1460 aa2.19□□□□□ -2.06
RTF1-207ENST00000561076 SYNRGQ9UMZ2 1314 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TBC1D3DA0A087WVF3 549 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TBC1D3IA0A087WXS9 549 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TBC1D3EA0A087X179 549 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TBC1D3KA0A087X1G2 549 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TRAV34A0A0B4J273 112 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TEX13CA0A0J9YWL9 993 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 RNF103-CHMP3A0A140T963 221 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TCRBV5S2A0A599 114 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 ARHGAP10A1A4S6 786 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TBC1D3BA6NDS4 549 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TBC1D3FA6NER0 549 aaPredicted RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 NUDT19A8MXV4 375 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TMEM233B4DJY2 109 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TBC1D3LB9A6J9 549 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 F8W735 103 aaPredicted RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 H0YAE9 185 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms