RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 RAPGEF5Q92565 580 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 OXCT2Q9BYC2 517 aaPredicted RBP17.93■□□□□ 0.46
HDDC3-206ENST00000561036 FRMD8P1Q9BZ68 369 aaPredicted RBP17.93■□□□□ 0.46
HDDC3-206ENST00000561036 ZWILCHQ9H900 591 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 DMAP1Q9NPF5 467 aaPredicted RBP17.93■□□□□ 0.46
HDDC3-206ENST00000561036 FAM114A2Q9NRY5 505 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 ADAM28Q9UKQ2 775 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 FAN1Q9Y2M0 1017 aa17.93■□□□□ 0.46
HDDC3-206ENST00000561036 hCG_1818297A0A087WSY0 165 aa17.92■□□□□ 0.46
HDDC3-206ENST00000561036 HHLA1C9JL84 531 aa17.92■□□□□ 0.46
HDDC3-206ENST00000561036 F8W810 466 aa17.92■□□□□ 0.46
HDDC3-206ENST00000561036 TTI1O43156 1089 aa17.92■□□□□ 0.46
HDDC3-206ENST00000561036 SEC31AO94979 1220 aaKnown RBP17.92■□□□□ 0.46
HDDC3-206ENST00000561036 KDELR1P24390 212 aa17.92■□□□□ 0.46
HDDC3-206ENST00000561036 MATKP42679 507 aa17.92■□□□□ 0.46
HDDC3-206ENST00000561036 TKTL1P51854 596 aa17.92■□□□□ 0.46
HDDC3-206ENST00000561036 YWHAZP63104 245 aaKnown RBP17.92■□□□□ 0.46
HDDC3-206ENST00000561036 MRPS25P82663 173 aaKnown RBP17.92■□□□□ 0.46
HDDC3-206ENST00000561036 TXNRD3NBQ6F5E7 133 aa17.92■□□□□ 0.46
HDDC3-206ENST00000561036 STRADAQ7RTN6 431 aa17.92■□□□□ 0.46
HDDC3-206ENST00000561036 DEFB128Q7Z7B8 93 aa17.92■□□□□ 0.46
HDDC3-206ENST00000561036 ZMIZ2Q8NF64 920 aa17.92■□□□□ 0.46
HDDC3-206ENST00000561036 GRK7Q8WTQ7 553 aa17.92■□□□□ 0.46
HDDC3-206ENST00000561036 CLEC4CQ8WTT0 213 aa17.92■□□□□ 0.46
HDDC3-206ENST00000561036 FAM172AQ8WUF8 416 aa17.92■□□□□ 0.46
HDDC3-206ENST00000561036 CASKIN2Q8WXE0 1202 aa17.92■□□□□ 0.46
HDDC3-206ENST00000561036 IRGQQ8WZA9 623 aa17.92■□□□□ 0.46
HDDC3-206ENST00000561036 CFAP57Q96MR6 1250 aa17.92■□□□□ 0.46
HDDC3-206ENST00000561036 ERP44Q9BS26 406 aa17.92■□□□□ 0.46
HDDC3-206ENST00000561036 DCLK3Q9C098 648 aa17.92■□□□□ 0.46
HDDC3-206ENST00000561036 ZCWPW1Q9H0M4 648 aa17.92■□□□□ 0.46
HDDC3-206ENST00000561036 PRG3Q9Y2Y8 225 aaPredicted RBP17.92■□□□□ 0.46
HDDC3-206ENST00000561036 ABHD14A-ACY1A0A1B0GW23 586 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 OR6C75A6NL08 312 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 TBKBP1A7MCY6 615 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 ZNF487B1APH4 448 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 PI4K2BG5E9Z4 385 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 KIAA0355O15063 1070 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 EFCAB14O75071 495 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 NOS2P35228 1153 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 SLC11A1P49279 550 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 DAOAP59103 153 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 MRPL58Q14197 206 aaKnown RBP17.91■□□□□ 0.46
HDDC3-206ENST00000561036 PDK2Q15119 407 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 NFE2Q16621 373 aaPredicted RBP17.91■□□□□ 0.46
HDDC3-206ENST00000561036 C15orf59Q2T9L4 293 aaPredicted RBP17.91■□□□□ 0.46
HDDC3-206ENST00000561036 SLC25A52Q3SY17 297 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 TTC27Q6P3X3 843 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 DRICH1Q6PGQ1 229 aaPredicted RBP17.91■□□□□ 0.46
HDDC3-206ENST00000561036 NECAB2Q7Z6G3 386 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 JAMLQ86YT9 394 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 SPATA2LQ8IUW3 424 aaPredicted RBP17.91■□□□□ 0.46
HDDC3-206ENST00000561036 KCTD6Q8NC69 237 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 CAVIN3Q969G5 261 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 PAWRQ96IZ0 340 aaKnown RBP17.91■□□□□ 0.46
HDDC3-206ENST00000561036 SLC2A13Q96QE2 648 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 HERPUD2Q9BSE4 406 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 TRIM62Q9BVG3 475 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 HEMGNQ9BXL5 484 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 FUT8Q9BYC5 575 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 NGRNQ9NPE2 291 aaKnown RBP17.91■□□□□ 0.46
HDDC3-206ENST00000561036 RRN3Q9NYV6 651 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 PCSK1NQ9UHG2 260 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 SF3B1O75533 1304 aaKnown RBP eCLIP17.91■□□□□ 0.46
HDDC3-206ENST00000561036 SCN5AQ14524 2016 aa17.91■□□□□ 0.46
HDDC3-206ENST00000561036 MDM4O15151 490 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 ENDOD1O94919 500 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 ECEL1O95672 775 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 TIMP1P01033 207 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 GALTP07902 379 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 MYBL2P10244 700 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 FGFR3P22607 806 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 CARSP49589 748 aaKnown RBP17.9■□□□□ 0.46
HDDC3-206ENST00000561036 GATMP50440 423 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 LBX1P52954 281 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 ATP11AP98196 1134 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 LMNB2Q03252 620 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 LRRC26Q2I0M4 334 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 SH3PXD2AQ5TCZ1 1133 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 DUPD1Q68J44 220 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 CYP4V2Q6ZWL3 525 aaPredicted RBP17.9■□□□□ 0.46
HDDC3-206ENST00000561036 ANKS1BQ7Z6G8 1248 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 LRRTM3Q86VH5 581 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 MAP7D3Q8IWC1 876 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 CCDC105Q8IYK2 499 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 TTC13Q8NBP0 860 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 ATL2Q8NHH9 583 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 FAM71BQ8TC56 605 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 C1orf54Q8WWF1 131 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 NT5C3BQ969T7 300 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 FUBP3Q96I24 572 aaKnown RBP eCLIP17.9■□□□□ 0.46
HDDC3-206ENST00000561036 PEBP4Q96S96 227 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 ULBP1Q9BZM6 244 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 FAM129AQ9BZQ8 928 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 TMLHEQ9NVH6 421 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 KLHL11Q9NVR0 708 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 MARCH5Q9NX47 278 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 STAP1Q9ULZ2 295 aa17.9■□□□□ 0.46
HDDC3-206ENST00000561036 TET1Q8NFU7 2136 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 CARNS1A5YM72 827 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms