RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 YME1L1Q96TA2 773 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 RHOXF2Q9BQY4 288 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 HERC2P3Q9BVR0 1158 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 GPR62Q9BZJ7 368 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 POPDC2Q9HBU9 364 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 HSFX1Q9UBD0 423 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 FEZ2Q9UHY8 353 aaPredicted RBP12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 MAFFQ9ULX9 164 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 ZNF487B1APH4 448 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 HHLA1C9JL84 531 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 FSCN2O14926 492 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 PRPSAP2O60256 369 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 TBC1D4O60343 1298 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 TJP3O95049 919 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 ZBED1O96006 694 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 SOD2P04179 222 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 KRT1P04264 644 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 PYGMP11217 842 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 EN2P19622 333 aaPredicted RBP12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 BDNFP23560 247 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 ITGB8P26012 769 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 CHRNA3P32297 505 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 NOS2P35228 1153 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 FLT3P36888 993 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 MARCKSL1P49006 195 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 FNTAP49354 379 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 DAOAP59103 153 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 TAS2R40P59535 323 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 SLC25A11Q02978 314 aaKnown RBP12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 C2orf54Q08AI8 447 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 SLC25A52Q3SY17 297 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 SLC39A12Q504Y0 691 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 ZFYVE27Q5T4F4 411 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 PM20D1Q6GTS8 502 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 KCNT2Q6UVM3 1135 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 CEP57Q86XR8 500 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 CCDC50Q8IVM0 306 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 MAP7D3Q8IWC1 876 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 SLC39A11Q8N1S5 342 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 ARHGAP18Q8N392 663 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 EMC1Q8N766 993 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 EIF1ADQ8N9N8 165 aaKnown RBP12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 C12orf50Q8NA57 414 aaPredicted RBP12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 PHOSPHO2Q8TCD6 241 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 CENPIQ92674 756 aaPredicted RBP12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 FAM149B1Q96BN6 582 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 LPIN3Q9BQK8 851 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 FRMD8P1Q9BZ68 369 aaPredicted RBP12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 FBXO44Q9H4M3 255 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 ANKZF1Q9H8Y5 726 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 PRDM16Q9HAZ2 1276 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 RBM12Q9NTZ6 932 aaKnown RBP12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 SPG21Q9NZD8 308 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 EHD2Q9NZN4 543 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 MTRRQ9UBK8 725 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 USP18Q9UMW8 372 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 SSX2IPQ9Y2D8 614 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 USP3Q9Y6I4 520 aa12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 KIAA0100Q14667 2235 aaKnown RBP12.39□□□□□ -0.43
AC087878.1-201ENST00000560709 COL4A6Q14031 1691 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 FNDC1Q4ZHG4 1894 aaPredicted RBP12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 F8W810 466 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 CAPN9O14815 690 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 MDM4O15151 490 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 PHF2O75151 1096 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 GABBR2O75899 941 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 BEST1O76090 585 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 F9P00740 461 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 CPB1P15086 417 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 MIPP30301 263 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 GRIK1P39086 918 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 RNASE9P60153 205 aaKnown RBP12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 RPL10AP62906 217 aaKnown RBP12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 DEFB103AP81534 67 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 ZNF211Q13398 564 aaPredicted RBP12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 DHX34Q14147 1143 aaKnown RBP12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 PDK2Q15119 407 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 CYP1B1Q16678 543 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 CCDC14Q49A88 953 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 TFDP3Q5H9I0 405 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 SLC8B1Q6J4K2 584 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 KIAA1841Q6NSI8 718 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 LRRTM3Q86VH5 581 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 TTC13Q8NBP0 860 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 FAM172AQ8WUF8 416 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 KHSRPQ92945 711 aaKnown RBP eCLIP12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 PGAP3Q96FM1 320 aaPredicted RBP12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 SLITRK1Q96PX8 696 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 C11orf84Q9BUA3 381 aaPredicted RBP12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 OSBPL8Q9BZF1 889 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 ULBP1Q9BZM6 244 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 CHST7Q9NS84 486 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 TMLHEQ9NVH6 421 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 STIM2Q9P246 746 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 RASAL2Q9UJF2 1139 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 RWDD3Q9Y3V2 267 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 INSL6Q9Y581 213 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 PCDHB12Q9Y5F1 795 aa12.38□□□□□ -0.43
AC087878.1-201ENST00000560709 FAM187AA6NFU0 413 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms