RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 GABRG2P18507 467 aa19.01■□□□□ 0.63
TSPAN3-208ENST00000560514 TDRD10Q5VZ19 366 aaKnown RBP19.01■□□□□ 0.63
TSPAN3-208ENST00000560514 SDE2Q6IQ49 451 aa19.01■□□□□ 0.63
TSPAN3-208ENST00000560514 DPH6Q7L8W6 267 aa19.01■□□□□ 0.63
TSPAN3-208ENST00000560514 ZNF720Q7Z2F6 126 aa19.01■□□□□ 0.63
TSPAN3-208ENST00000560514 PNPLA1Q8N8W4 532 aa19.01■□□□□ 0.63
TSPAN3-208ENST00000560514 TRIML1Q8N9V2 468 aa19.01■□□□□ 0.63
TSPAN3-208ENST00000560514 HNRNPLLQ8WVV9 542 aaKnown RBP19.01■□□□□ 0.63
TSPAN3-208ENST00000560514 HSPA12BQ96MM6 686 aa19.01■□□□□ 0.63
TSPAN3-208ENST00000560514 BLOC1S4Q9NUP1 217 aa19.01■□□□□ 0.63
TSPAN3-208ENST00000560514 DEC1Q9P2X7 70 aa19.01■□□□□ 0.63
TSPAN3-208ENST00000560514 ACACAQ13085 2346 aa19.01■□□□□ 0.63
TSPAN3-208ENST00000560514 LAMA5O15230 3695 aa19.01■□□□□ 0.63
TSPAN3-208ENST00000560514 ADSSP30520 456 aa19■□□□□ 0.63
TSPAN3-208ENST00000560514 USP46P62068 366 aa19■□□□□ 0.63
TSPAN3-208ENST00000560514 SOWAHAQ2M3V2 549 aa19■□□□□ 0.63
TSPAN3-208ENST00000560514 LY6G5CQ5SRR4 150 aa19■□□□□ 0.63
TSPAN3-208ENST00000560514 CCNI2Q6ZMN8 369 aaPredicted RBP19■□□□□ 0.63
TSPAN3-208ENST00000560514 NAXDQ8IW45 347 aa19■□□□□ 0.63
TSPAN3-208ENST00000560514 NAT16Q8N8M0 369 aa19■□□□□ 0.63
TSPAN3-208ENST00000560514 LARP4BQ92615 738 aaKnown RBP19■□□□□ 0.63
TSPAN3-208ENST00000560514 SAAL1Q96ER3 474 aa19■□□□□ 0.63
TSPAN3-208ENST00000560514 ACCSQ96QU6 501 aa19■□□□□ 0.63
TSPAN3-208ENST00000560514 TTLL2Q9BWV7 592 aa19■□□□□ 0.63
TSPAN3-208ENST00000560514 IKZF4Q9H2S9 585 aa19■□□□□ 0.63
TSPAN3-208ENST00000560514 MRPL44Q9H9J2 332 aaKnown RBP19■□□□□ 0.63
TSPAN3-208ENST00000560514 IGHV1OR15-9A0A0B4J2B8 117 aa18.99■□□□□ 0.63
TSPAN3-208ENST00000560514 E2F8A0AVK6 867 aa18.99■□□□□ 0.63
TSPAN3-208ENST00000560514 OLFM2O95897 454 aa18.99■□□□□ 0.63
TSPAN3-208ENST00000560514 NTSR1P30989 418 aa18.99■□□□□ 0.63
TSPAN3-208ENST00000560514 WASP42768 502 aa18.99■□□□□ 0.63
TSPAN3-208ENST00000560514 NOP14P78316 857 aaKnown RBP18.99■□□□□ 0.63
TSPAN3-208ENST00000560514 IFRD2Q12894 506 aaPredicted RBP18.99■□□□□ 0.63
TSPAN3-208ENST00000560514 TAF10Q12962 218 aa18.99■□□□□ 0.63
TSPAN3-208ENST00000560514 C10orf76Q5T2E6 689 aa18.99■□□□□ 0.63
TSPAN3-208ENST00000560514 HS2ST1Q7LGA3 356 aa18.99■□□□□ 0.63
TSPAN3-208ENST00000560514 SFR1Q86XK3 245 aa18.99■□□□□ 0.63
TSPAN3-208ENST00000560514 SYCP3Q8IZU3 236 aa18.99■□□□□ 0.63
TSPAN3-208ENST00000560514 COL26A1Q96A83 441 aa18.99■□□□□ 0.63
TSPAN3-208ENST00000560514 OTUB2Q96DC9 234 aa18.99■□□□□ 0.63
TSPAN3-208ENST00000560514 ANKRD36BP1Q96IX9 119 aa18.99■□□□□ 0.63
TSPAN3-208ENST00000560514 MTMR12Q9C0I1 747 aa18.99■□□□□ 0.63
TSPAN3-208ENST00000560514 CYP8B1Q9UNU6 501 aa18.99■□□□□ 0.63
TSPAN3-208ENST00000560514 SH3BP1Q9Y3L3 701 aa18.99■□□□□ 0.63
TSPAN3-208ENST00000560514 F8VP50 259 aa18.98■□□□□ 0.63
TSPAN3-208ENST00000560514 OAS1P00973 400 aaKnown RBP18.98■□□□□ 0.63
TSPAN3-208ENST00000560514 PDGFRBP09619 1106 aa18.98■□□□□ 0.63
TSPAN3-208ENST00000560514 CHRM1P11229 460 aaPredicted RBP18.98■□□□□ 0.63
TSPAN3-208ENST00000560514 LMO2P25791 158 aa18.98■□□□□ 0.63
TSPAN3-208ENST00000560514 WNT7BP56706 349 aa18.98■□□□□ 0.63
TSPAN3-208ENST00000560514 ANO4Q32M45 955 aa18.98■□□□□ 0.63
TSPAN3-208ENST00000560514 WDR45BQ5MNZ6 344 aa18.98■□□□□ 0.63
TSPAN3-208ENST00000560514 DYMQ7RTS9 669 aa18.98■□□□□ 0.63
TSPAN3-208ENST00000560514 SLC41A1Q8IVJ1 513 aa18.98■□□□□ 0.63
TSPAN3-208ENST00000560514 MDM1Q8TC05 714 aa18.98■□□□□ 0.63
TSPAN3-208ENST00000560514 HPDLQ96IR7 371 aa18.98■□□□□ 0.63
TSPAN3-208ENST00000560514 LRIG1Q96JA1 1093 aa18.98■□□□□ 0.63
TSPAN3-208ENST00000560514 MMS19Q96T76 1030 aa18.98■□□□□ 0.63
TSPAN3-208ENST00000560514 KIF2CQ99661 725 aa18.98■□□□□ 0.63
TSPAN3-208ENST00000560514 ZDHHC5Q9C0B5 715 aa18.98■□□□□ 0.63
TSPAN3-208ENST00000560514 CRTAC1Q9NQ79 661 aa18.98■□□□□ 0.63
TSPAN3-208ENST00000560514 PLXNB3Q9ULL4 1909 aa18.98■□□□□ 0.63
TSPAN3-208ENST00000560514 ITPR1Q14643 2758 aa18.98■□□□□ 0.63
TSPAN3-208ENST00000560514 GOLGA8IPA6NC78 632 aa18.97■□□□□ 0.63
TSPAN3-208ENST00000560514 GOLGA8JA6NMD2 632 aa18.97■□□□□ 0.63
TSPAN3-208ENST00000560514 H3BQV1 296 aa18.97■□□□□ 0.63
TSPAN3-208ENST00000560514 TULP3O75386 442 aa18.97■□□□□ 0.63
TSPAN3-208ENST00000560514 TNNC2P02585 160 aa18.97■□□□□ 0.63
TSPAN3-208ENST00000560514 CHPFQ8IZ52 775 aa18.97■□□□□ 0.63
TSPAN3-208ENST00000560514 TERB1Q8NA31 727 aa18.97■□□□□ 0.63
TSPAN3-208ENST00000560514 MYCBPAPQ8TBZ2 947 aa18.97■□□□□ 0.63
TSPAN3-208ENST00000560514 FOXJ1Q92949 421 aa18.97■□□□□ 0.63
TSPAN3-208ENST00000560514 PCED1BQ96HM7 432 aa18.97■□□□□ 0.63
TSPAN3-208ENST00000560514 C8orf48Q96LL4 319 aa18.97■□□□□ 0.63
TSPAN3-208ENST00000560514 PDE11AQ9HCR9 933 aa18.97■□□□□ 0.63
TSPAN3-208ENST00000560514 SEL1LQ9UBV2 794 aa18.97■□□□□ 0.63
TSPAN3-208ENST00000560514 RAXQ9Y2V3 346 aa18.97■□□□□ 0.63
TSPAN3-208ENST00000560514 LOC400499M0QZD8 3231 aa18.97■□□□□ 0.63
TSPAN3-208ENST00000560514 HOXC11O43248 304 aaPredicted RBP18.96■□□□□ 0.63
TSPAN3-208ENST00000560514 GCNT3O95395 438 aa18.96■□□□□ 0.63
TSPAN3-208ENST00000560514 GARTP22102 1010 aa18.96■□□□□ 0.63
TSPAN3-208ENST00000560514 WARSP23381 471 aaKnown RBP18.96■□□□□ 0.63
TSPAN3-208ENST00000560514 DDIT3P35638 169 aa18.96■□□□□ 0.63
TSPAN3-208ENST00000560514 LONP1P36776 959 aaKnown RBP18.96■□□□□ 0.63
TSPAN3-208ENST00000560514 MDH1BQ5I0G3 518 aa18.96■□□□□ 0.63
TSPAN3-208ENST00000560514 L1TD1Q5T7N2 865 aaKnown RBP18.96■□□□□ 0.63
TSPAN3-208ENST00000560514 TOGARAM2Q6ZUX3 1019 aa18.96■□□□□ 0.63
TSPAN3-208ENST00000560514 PHTF2Q8N3S3 785 aa18.96■□□□□ 0.63
TSPAN3-208ENST00000560514 PDZD8Q8NEN9 1154 aa18.96■□□□□ 0.63
TSPAN3-208ENST00000560514 CXorf38Q8TB03 319 aa18.96■□□□□ 0.63
TSPAN3-208ENST00000560514 IPO4Q8TEX9 1081 aaKnown RBP18.96■□□□□ 0.63
TSPAN3-208ENST00000560514 SETD7Q8WTS6 366 aaKnown RBP18.96■□□□□ 0.63
TSPAN3-208ENST00000560514 ZNF419Q96HQ0 510 aaPredicted RBP18.96■□□□□ 0.63
TSPAN3-208ENST00000560514 SNX25Q9H3E2 840 aa18.96■□□□□ 0.63
TSPAN3-208ENST00000560514 SCUBE2Q9NQ36 999 aa18.96■□□□□ 0.63
TSPAN3-208ENST00000560514 TBC1D7Q9P0N9 293 aa18.96■□□□□ 0.63
TSPAN3-208ENST00000560514 SIX4Q9UIU6 781 aa18.96■□□□□ 0.63
TSPAN3-208ENST00000560514 GJB3O75712 270 aa18.95■□□□□ 0.62
TSPAN3-208ENST00000560514 PPP1R37O75864 691 aa18.95■□□□□ 0.62
TSPAN3-208ENST00000560514 GAP43P17677 238 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms