RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 DCAF6Q58WW2 860 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 TFDP3Q5H9I0 405 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 SYPL2Q5VXT5 272 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 FAM117BQ6P1L5 589 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.39□□□□□ -0.597e-6■□□□□ 8.4
SNRPA1-211ENST00000560433 DEFB106AQ8N104 65 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 TMEM86AQ8N2M4 240 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 TAB3Q8N5C8 712 aaPredicted RBP11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 RBM41Q96IZ5 413 aaKnown RBP11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 PGLYRP2Q96PD5 576 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 ULBP1Q9BZM6 244 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 LRRC19Q9H756 370 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 OGFRQ9NZT2 677 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 PCYOX1Q9UHG3 505 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 HPCAL4Q9UM19 191 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 POLR3GO15318 223 aaPredicted RBP11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 PRPSAP2O60256 369 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 CST8O60676 142 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 ZSCAN5DPP0CG00 497 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 SETSIPP0DME0 302 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 NRLP54845 237 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 CDH6P55285 790 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 SLC8A3P57103 927 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 PLCB3Q01970 1234 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 CYP1B1Q16678 543 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 PPP6R3Q5H9R7 873 aaPredicted RBP11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 SDHAF4Q5VUM1 108 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 DUPD1Q68J44 220 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 DCLRE1AQ6PJP8 1040 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 NPNTQ6UXI9 565 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 TMEM173Q86WV6 379 aaPredicted RBP11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 METTL23Q86XA0 190 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 MYCBPAPQ8TBZ2 947 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 FBXO25Q8TCJ0 367 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 URGCPQ8TCY9 931 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 TBCBQ99426 244 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 NRDE2Q9H7Z3 1164 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 CDH9Q9ULB4 789 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 LRFN2Q9ULH4 789 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 NAALADL1Q9UQQ1 740 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 YJEFN3A6XGL0 299 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 E7ENQ6 273 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 M0QZQ0 153 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 RRP9O43818 475 aaKnown RBP11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 TADA2AO75478 443 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 ECEL1O95672 775 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 ARPP19P56211 112 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 YWHAHQ04917 246 aaPredicted RBP11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 DSC1Q08554 894 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 LRRC38Q5VT99 294 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 FAM131BQ86XD5 332 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 SIX6OS1Q8N1H7 587 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 PYROXD2Q8N2H3 581 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 NETO2Q8NC67 525 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 SCAMP5Q8TAC9 235 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 STK32AQ8WU08 396 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 CASD1Q96PB1 797 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 TMEM121Q9BTD3 319 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 FTHL17Q9BXU8 183 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 DNAJC17Q9NVM6 304 aaKnown RBP11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 TMEM161AQ9NX61 479 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 FAM53CQ9NYF3 392 aa11.38□□□□□ -0.59
SNRPA1-211ENST00000560433 TBKBP1A7MCY6 615 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 KRT7P08729 469 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 CYP2F1P24903 491 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 TNFRSF8P28908 595 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 GGCXP38435 758 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 MRPS5P82675 430 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 NME3Q13232 169 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 DHX34Q14147 1143 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 SLC39A12Q504Y0 691 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 INTS6LQ5JSJ4 861 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 UBAP2Q5T6F2 1119 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 GSTA5Q7RTV2 222 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 RFX6Q8HWS3 928 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 KRT222Q8N1A0 295 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 CCDC185Q8N715 623 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 SEPT8Q92599 483 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 EDEM1Q92611 657 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 PAWRQ96IZ0 340 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 SUSD3Q96L08 255 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 HSFY1Q96LI6 401 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 PWWP2AQ96N64 755 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 GPR62Q9BZJ7 368 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 DDX56Q9NY93 547 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 ASIC3Q9UHC3 531 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 DCDC2CA8MYV0 355 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 PITPNM1O00562 1244 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 TJP3O95049 919 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 ITGB8P26012 769 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 PCSK1P29120 753 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 OAS2P29728 719 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 CLUL1Q15846 466 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 SLC26A9Q7LBE3 791 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 C12orf50Q8NA57 414 aaPredicted RBP11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 OR2W6PQ8NHA6 318 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 GPR152Q8TDT2 470 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 ACBD6Q9BR61 282 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 SNRNP25Q9BV90 132 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 RAB17Q9H0T7 212 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms