RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 UBL4BQ8N7F7 174 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 SPPL3Q8TCT6 385 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 FNIP1Q8TF40 1166 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 HDAC7Q8WUI4 952 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 ATRIPQ8WXE1 791 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 ARHGEF26Q96DR7 871 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 MCRS1Q96EZ8 462 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 CEP295NLQ96MC4 621 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 PKMYT1Q99640 499 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 EMILIN2Q9BXX0 1053 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 IRX2Q9BZI1 471 aaPredicted RBP6.76□□□□□ -1.33
SPG11-221ENST00000560299 FBXO44Q9H4M3 255 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 CSNK1G1Q9HCP0 422 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 OSGEPQ9NPF4 335 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 CNGB3Q9NQW8 809 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 TMEM51Q9NW97 253 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 ASNSD1Q9NWL6 643 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 ABI2Q9NYB9 513 aaPredicted RBP6.76□□□□□ -1.33
SPG11-221ENST00000560299 FNIP2Q9P278 1114 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 HSFX1Q9UBD0 423 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 MTRRQ9UBK8 725 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 SALL4Q9UJQ4 1053 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 CAPN6Q9Y6Q1 641 aa6.76□□□□□ -1.33
SPG11-221ENST00000560299 PRRC2BQ5JSZ5 2229 aaKnown RBP6.76□□□□□ -1.33
SPG11-221ENST00000560299 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.75□□□□□ -1.33
SPG11-221ENST00000560299 CCDC66A2RUB6 948 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 GRID2IPA4D2P6 1211 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 TMEM191CA6NGB0 347 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 TMEM110-MUSTN1A8MSY1 372 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 C2CD2LO14523 706 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 CAPN9O14815 690 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 FSCN2O14926 492 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 TBC1D4O60343 1298 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 BUB1BO60566 1050 aaPredicted RBP6.75□□□□□ -1.33
SPG11-221ENST00000560299 HSF2BPO75031 334 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 URI1O94763 535 aaPredicted RBP6.75□□□□□ -1.33
SPG11-221ENST00000560299 PROSCO94903 275 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 RTN3O95197 1032 aaPredicted RBP6.75□□□□□ -1.33
SPG11-221ENST00000560299 ERBB2P04626 1255 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 CTSAP10619 480 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 MYOGP15173 224 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 FOSL2P15408 326 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 PDGFRAP16234 1089 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 PRLRP16471 622 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 CYP2F1P24903 491 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 MAN1A1P33908 653 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 OR1D2P34982 312 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 CETN2P41208 172 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 NDUFV1P49821 464 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 TKTL1P51854 596 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 RNASE9P60153 205 aaKnown RBP6.75□□□□□ -1.33
SPG11-221ENST00000560299 MRPS5P82675 430 aaKnown RBP6.75□□□□□ -1.33
SPG11-221ENST00000560299 GPM6BQ13491 265 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 KCNC3Q14003 757 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 CAMK1Q14012 370 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 ADGRE1Q14246 886 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 SMC1AQ14683 1233 aaKnown RBP6.75□□□□□ -1.33
SPG11-221ENST00000560299 CLUL1Q15846 466 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 HADHQ16836 314 aaKnown RBP6.75□□□□□ -1.33
SPG11-221ENST00000560299 AAK1Q2M2I8 961 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 MGAT5BQ3V5L5 792 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 C2CD6Q53TS8 623 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 MEI1Q5TIA1 1274 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 PRSS55Q6UWB4 352 aaPredicted RBP6.75□□□□□ -1.33
SPG11-221ENST00000560299 TAS1R1Q7RTX1 841 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 SLFN11Q7Z7L1 901 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 PHLDB2Q86SQ0 1253 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 LRRTM3Q86VH5 581 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 TMEM173Q86WV6 379 aaPredicted RBP6.75□□□□□ -1.33
SPG11-221ENST00000560299 SCN4BQ8IWT1 228 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 SCUBE3Q8IX30 993 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 NUP93Q8N1F7 819 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 SCML4Q8N228 414 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 ARHGAP18Q8N392 663 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 LRRC57Q8N9N7 239 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 KLHL23Q8NBE8 558 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 ZNF461Q8TAF7 563 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 BCL7CQ8WUZ0 217 aaPredicted RBP6.75□□□□□ -1.33
SPG11-221ENST00000560299 ATXN2LQ8WWM7 1075 aaKnown RBP6.75□□□□□ -1.33
SPG11-221ENST00000560299 IRGQQ8WZA9 623 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 KHSRPQ92945 711 aaKnown RBP eCLIP6.75□□□□□ -1.33
SPG11-221ENST00000560299 FAM149B1Q96BN6 582 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 B3GALT6Q96L58 329 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 C8orf48Q96LL4 319 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 MCEEQ96PE7 176 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 WDR24Q96S15 920 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 TMEM209Q96SK2 561 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 SMOQ99835 787 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 LPIN3Q9BQK8 851 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 C17orf80Q9BSJ5 609 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 NSUN3Q9H649 340 aaKnown RBP6.75□□□□□ -1.33
SPG11-221ENST00000560299 COMMD8Q9NX08 183 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 RRN3Q9NYV6 651 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 RNF14Q9UBS8 474 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 AFF4Q9UHB7 1163 aaKnown RBP6.75□□□□□ -1.33
SPG11-221ENST00000560299 DPP7Q9UHL4 492 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 CYTH4Q9UIA0 394 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 ALG6Q9Y672 507 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 SAR1BQ9Y6B6 198 aa6.75□□□□□ -1.33
SPG11-221ENST00000560299 CDY1Q9Y6F8 540 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms