RNA–Protein interactions for RNA: ENST00000559971.5

APH1B-207, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 1 (best)

Gene APH1B, Length 1,455 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-207ENST00000559971 PKDCCQ504Y2 493 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 KCNT1Q5JUK3 1230 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 FYB2Q5VWT5 728 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 NOTUMQ6P988 496 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 RPAINQ86UA6 219 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 CDR2LQ86X02 465 aaPredicted RBP16.99■□□□□ 0.31
APH1B-207ENST00000559971 CPB2Q96IY4 423 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 RAB3IPQ96QF0 476 aaPredicted RBP16.99■□□□□ 0.31
APH1B-207ENST00000559971 TUBB6Q9BUF5 446 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 KLC2Q9H0B6 622 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 ABHD16BQ9H3Z7 469 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.99■□□□□ 0.31
APH1B-207ENST00000559971 VTNP04004 478 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 EPHX2P34913 555 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 RASSF2P50749 326 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 WDR4P57081 412 aaKnown RBP16.99■□□□□ 0.31
APH1B-207ENST00000559971 GPX6P59796 221 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 PPARDQ03181 441 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 FAM183BPQ6ZVS7 135 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 ANKRD23Q86SG2 305 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 PRUNE1Q86TP1 453 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 PSTKQ8IV42 348 aaKnown RBP16.99■□□□□ 0.31
APH1B-207ENST00000559971 UNC45BQ8IWX7 931 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 TRIM42Q8IWZ5 723 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 MCUQ8NE86 351 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 FBXO36Q8NEA4 188 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 ACSF2Q96CM8 615 aaPredicted RBP16.99■□□□□ 0.31
APH1B-207ENST00000559971 ZNF560Q96MR9 790 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 FERMT1Q9BQL6 677 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 VPS11Q9H270 941 aa16.99■□□□□ 0.31
APH1B-207ENST00000559971 UBQLN1Q9UMX0 589 aaKnown RBP16.99■□□□□ 0.31
APH1B-207ENST00000559971 SMIM35A0A1B0GVV1 85 aa16.98■□□□□ 0.31
APH1B-207ENST00000559971 E5RJQ4 531 aa16.98■□□□□ 0.31
APH1B-207ENST00000559971 TROVE2P10155 538 aaKnown RBP eCLIP16.98■□□□□ 0.31
APH1B-207ENST00000559971 BCAR1P56945 870 aa16.98■□□□□ 0.31
APH1B-207ENST00000559971 BASP1P80723 227 aaKnown RBP16.98■□□□□ 0.31
APH1B-207ENST00000559971 KCNJ11Q14654 390 aa16.98■□□□□ 0.31
APH1B-207ENST00000559971 FASTKD3Q14CZ7 662 aaKnown RBP16.98■□□□□ 0.31
APH1B-207ENST00000559971 BBS9Q3SYG4 887 aa16.98■□□□□ 0.31
APH1B-207ENST00000559971 MAP1SQ66K74 1059 aaPredicted RBP16.98■□□□□ 0.31
APH1B-207ENST00000559971 SLC9A4Q6AI14 798 aa16.98■□□□□ 0.31
APH1B-207ENST00000559971 OLFML1Q6UWY5 402 aa16.98■□□□□ 0.31
APH1B-207ENST00000559971 FAM71DQ8N9W8 422 aa16.98■□□□□ 0.31
APH1B-207ENST00000559971 UBA3Q8TBC4 463 aa16.98■□□□□ 0.31
APH1B-207ENST00000559971 FAF2Q96CS3 445 aa16.98■□□□□ 0.31
APH1B-207ENST00000559971 ZNF668Q96K58 619 aaPredicted RBP16.98■□□□□ 0.31
APH1B-207ENST00000559971 SNX27Q96L92 541 aa16.98■□□□□ 0.31
APH1B-207ENST00000559971 PAFAH2Q99487 392 aa16.98■□□□□ 0.31
APH1B-207ENST00000559971 KATNBL1Q9H079 304 aa16.98■□□□□ 0.31
APH1B-207ENST00000559971 ECT2Q9H8V3 914 aa16.98■□□□□ 0.31
APH1B-207ENST00000559971 RCOR3Q9P2K3 495 aaPredicted RBP16.98■□□□□ 0.31
APH1B-207ENST00000559971 TJP2Q9UDY2 1190 aa16.98■□□□□ 0.31
APH1B-207ENST00000559971 HMGXB4Q9UGU5 601 aa16.98■□□□□ 0.31
APH1B-207ENST00000559971 ZNF180Q9UJW8 692 aa16.98■□□□□ 0.31
APH1B-207ENST00000559971 SBF1O95248 1867 aa16.98■□□□□ 0.31
APH1B-207ENST00000559971 NRCAMQ92823 1304 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 EDF1O60869 148 aaKnown RBP16.97■□□□□ 0.31
APH1B-207ENST00000559971 ATP2C2O75185 946 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 UBOX5O94941 541 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 ZBED1O96006 694 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 MT-ND3P03897 115 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 MMP3P08254 477 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 INHBAP08476 426 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 NQO1P15559 274 aaKnown RBP16.97■□□□□ 0.31
APH1B-207ENST00000559971 GTF2A1P52655 376 aaPredicted RBP16.97■□□□□ 0.31
APH1B-207ENST00000559971 BCAT1P54687 386 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 FKBP1BP68106 108 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 ELF3P78545 371 aaPredicted RBP16.97■□□□□ 0.31
APH1B-207ENST00000559971 SARNPP82979 210 aaKnown RBP16.97■□□□□ 0.31
APH1B-207ENST00000559971 ZNF200P98182 395 aaPredicted RBP16.97■□□□□ 0.31
APH1B-207ENST00000559971 ZBTB6Q15916 424 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 CCDC14Q49A88 953 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 FNBP1LQ5T0N5 605 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 CATSPER4Q7RTX7 472 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 DPP9Q86TI2 863 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 CRYBG2Q8N1P7 616 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 OR6J1Q8NGC5 347 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 SLC35F5Q8WV83 523 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 HSFY1Q96LI6 401 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 PAIP2Q9BPZ3 127 aaKnown RBP16.97■□□□□ 0.31
APH1B-207ENST00000559971 R3HDMLQ9H3Y0 253 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 ABCF3Q9NUQ8 709 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 CNTN3Q9P232 1028 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 PHTF1Q9UMS5 762 aa16.97■□□□□ 0.31
APH1B-207ENST00000559971 IQCA1LA6NCM1 817 aa16.96■□□□□ 0.31
APH1B-207ENST00000559971 A6NJR5 290 aa16.96■□□□□ 0.31
APH1B-207ENST00000559971 HACD1B0YJ81 288 aa16.96■□□□□ 0.31
APH1B-207ENST00000559971 PFKMP08237 780 aa16.96■□□□□ 0.31
APH1B-207ENST00000559971 CYP3A5P20815 502 aa16.96■□□□□ 0.31
APH1B-207ENST00000559971 FOXN2P32314 431 aa16.96■□□□□ 0.31
APH1B-207ENST00000559971 RPL34P49207 117 aaKnown RBP16.96■□□□□ 0.31
APH1B-207ENST00000559971 GDF10P55107 478 aa16.96■□□□□ 0.31
APH1B-207ENST00000559971 CDK16Q00536 496 aa16.96■□□□□ 0.31
APH1B-207ENST00000559971 BST2Q10589 180 aaKnown RBP16.96■□□□□ 0.31
APH1B-207ENST00000559971 SLC26A9Q7LBE3 791 aa16.96■□□□□ 0.31
APH1B-207ENST00000559971 ANKMY2Q8IV38 441 aa16.96■□□□□ 0.31
APH1B-207ENST00000559971 HACE1Q8IYU2 909 aa16.96■□□□□ 0.31
APH1B-207ENST00000559971 PLD5Q8N7P1 536 aa16.96■□□□□ 0.31
APH1B-207ENST00000559971 ANKRD52Q8NB46 1076 aa16.96■□□□□ 0.31
APH1B-207ENST00000559971 SLC44A1Q8WWI5 657 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms