RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 SPATA18Q8TC71 538 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 SLC35F5Q8WV83 523 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 TMEM40Q8WWA1 233 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 KHSRPQ92945 711 aaKnown RBP eCLIP11.56□□□□□ -0.56
SPG11-217ENST00000559511 WDR83Q9BRX9 315 aaKnown RBP11.56□□□□□ -0.56
SPG11-217ENST00000559511 APOL6Q9BWW8 343 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 VPS37BQ9H9H4 285 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 CAPN7Q9Y6W3 813 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 CLUHO75153 1309 aa11.55□□□□□ -0.56
SPG11-217ENST00000559511 MYADML2A6NDP7 307 aa11.55□□□□□ -0.56
SPG11-217ENST00000559511 TCP11X1B4DZS4 312 aa11.55□□□□□ -0.56
SPG11-217ENST00000559511 RASA4BC9J798 803 aa11.55□□□□□ -0.56
SPG11-217ENST00000559511 POC1B-GALNT4F8VUJ3 575 aa11.55□□□□□ -0.56
SPG11-217ENST00000559511 MCF2LO15068 1137 aa11.55□□□□□ -0.56
SPG11-217ENST00000559511 PAPSS1O43252 624 aaPredicted RBP11.55□□□□□ -0.56
SPG11-217ENST00000559511 RASA4O43374 803 aa11.55□□□□□ -0.56
SPG11-217ENST00000559511 PRPSAP2O60256 369 aa11.55□□□□□ -0.56
SPG11-217ENST00000559511 TMEM63AO94886 807 aa11.55□□□□□ -0.56
SPG11-217ENST00000559511 RBP3P10745 1247 aa11.55□□□□□ -0.56
SPG11-217ENST00000559511 TM4SF4P48230 202 aa11.55□□□□□ -0.56
SPG11-217ENST00000559511 YARSP54577 528 aaKnown RBP11.55□□□□□ -0.56
SPG11-217ENST00000559511 GPX6P59796 221 aa11.55□□□□□ -0.56
SPG11-217ENST00000559511 MTM1Q13496 603 aa11.55□□□□□ -0.56
SPG11-217ENST00000559511 STILQ15468 1287 aa11.55□□□□□ -0.56
SPG11-217ENST00000559511 SOWAHAQ2M3V2 549 aa11.55□□□□□ -0.56
SPG11-217ENST00000559511 C9orf57Q5W0N0 161 aa11.55□□□□□ -0.56
SPG11-217ENST00000559511 ZC3H18Q86VM9 953 aaKnown RBP11.55□□□□□ -0.56
SPG11-217ENST00000559511 RIBC1Q8N443 379 aaPredicted RBP11.55□□□□□ -0.56
SPG11-217ENST00000559511 CCT6BQ92526 530 aa11.55□□□□□ -0.56
SPG11-217ENST00000559511 ELAC2Q9BQ52 826 aaKnown RBP11.55□□□□□ -0.56
SPG11-217ENST00000559511 SLC4A5Q9BY07 1137 aa11.55□□□□□ -0.56
SPG11-217ENST00000559511 B3GNT5Q9BYG0 378 aa11.55□□□□□ -0.56
SPG11-217ENST00000559511 GPATCH2LQ9NWQ4 482 aa11.55□□□□□ -0.56
SPG11-217ENST00000559511 CNTN3Q9P232 1028 aa11.55□□□□□ -0.56
SPG11-217ENST00000559511 ZNF638Q14966 1978 aaKnown RBP11.55□□□□□ -0.56
SPG11-217ENST00000559511 DNM1LO00429 736 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 DPYSL4O14531 572 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 NDC80O14777 642 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 AKR1A1P14550 325 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 IL4RP24394 825 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 HOXC8P31273 242 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 SLC6A3Q01959 620 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 ACTN3Q08043 901 aaPredicted RBP11.54□□□□□ -0.56
SPG11-217ENST00000559511 SNX17Q15036 470 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 NOMO1Q15155 1222 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 PCBP1Q15365 356 aaKnown RBP eCLIP11.54□□□□□ -0.56
SPG11-217ENST00000559511 TTC31Q49AM3 519 aaPredicted RBP11.54□□□□□ -0.56
SPG11-217ENST00000559511 ANKRD20A8PQ5CZ79 823 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 ZC3H12AQ5D1E8 599 aaKnown RBP11.54□□□□□ -0.56
SPG11-217ENST00000559511 TMEM110Q86TL2 294 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 TRABD2AQ86V40 505 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 TAX1BP1Q86VP1 789 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 TDRPQ86YL5 185 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 LRRC52Q8N7C0 313 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 BEST2Q8NFU1 509 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 OR6B3Q8NGW1 331 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 FAM172AQ8WUF8 416 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 CKAP2Q8WWK9 683 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 MAK16Q9BXY0 300 aaKnown RBP11.54□□□□□ -0.56
SPG11-217ENST00000559511 ARHGAP39Q9C0H5 1083 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 MIS12Q9H081 205 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 NGRNQ9NPE2 291 aaKnown RBP11.54□□□□□ -0.56
SPG11-217ENST00000559511 UBN1Q9NPG3 1134 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 FGFR1OP2Q9NVK5 253 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 KLK14Q9P0G3 267 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 ACTL7BQ9Y614 415 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 GOLGA6L7A0A1B0GV03 622 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 C17orf102A2RUQ5 167 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 CA12O43570 354 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 TFE3P19532 575 aaPredicted RBP11.54□□□□□ -0.56
SPG11-217ENST00000559511 SSTR1P30872 391 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 ITIH4Q14624 930 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 EFTUD2Q15029 972 aaKnown RBP eCLIP11.54□□□□□ -0.56
SPG11-217ENST00000559511 PKN2Q16513 984 aaKnown RBP11.54□□□□□ -0.56
SPG11-217ENST00000559511 CA9Q16790 459 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 FBXW10Q5XX13 1052 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 SCYL2Q6P3W7 929 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 C1orf228Q6PIY5 440 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 APBB1IPQ7Z5R6 666 aaPredicted RBP11.54□□□□□ -0.56
SPG11-217ENST00000559511 CLEC4CQ8WTT0 213 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 KBTBD7Q8WVZ9 684 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 KATNAL1Q9BW62 490 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 TRIM6Q9C030 488 aaPredicted RBP11.54□□□□□ -0.56
SPG11-217ENST00000559511 KIF9Q9HAQ2 790 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 SAMD15Q9P1V8 674 aa11.54□□□□□ -0.56
SPG11-217ENST00000559511 E7ESA3 106 aa11.53□□□□□ -0.56
SPG11-217ENST00000559511 SPTLC1O15269 473 aa11.53□□□□□ -0.56
SPG11-217ENST00000559511 DUSP11O75319 330 aaKnown RBP11.53□□□□□ -0.56
SPG11-217ENST00000559511 SPAG7O75391 227 aa11.53□□□□□ -0.56
SPG11-217ENST00000559511 PIAS1O75925 651 aa11.53□□□□□ -0.56
SPG11-217ENST00000559511 OAS1P00973 400 aaKnown RBP11.53□□□□□ -0.56
SPG11-217ENST00000559511 FGFR1P11362 822 aa11.53□□□□□ -0.56
SPG11-217ENST00000559511 CCDC130P13994 396 aa11.53□□□□□ -0.56
SPG11-217ENST00000559511 LMO2P25791 158 aa11.53□□□□□ -0.56
SPG11-217ENST00000559511 ARL4CP56559 192 aa11.53□□□□□ -0.56
SPG11-217ENST00000559511 ROR1Q01973 937 aa11.53□□□□□ -0.56
SPG11-217ENST00000559511 KRT81Q14533 505 aa11.53□□□□□ -0.56
SPG11-217ENST00000559511 ZNF618Q5T7W0 954 aa11.53□□□□□ -0.56
SPG11-217ENST00000559511 SESTD1Q86VW0 696 aa11.53□□□□□ -0.56
SPG11-217ENST00000559511 PQLC3Q8N755 202 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms