RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 CABS1Q96KC9 395 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 PEBP4Q96S96 227 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 ZNF670Q9BS34 389 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 ZFYVE28Q9HCC9 887 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 NGRNQ9NPE2 291 aaKnown RBP11.79□□□□□ -0.52
CLPX-204ENST00000559152 SENP1Q9P0U3 644 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 SAE1Q9UBE0 346 aaPredicted RBP11.79□□□□□ -0.52
CLPX-204ENST00000559152 SLC24A2Q9UI40 661 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 NAALADL1Q9UQQ1 740 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 TNPO2O14787 897 aaKnown RBP11.78□□□□□ -0.52
CLPX-204ENST00000559152 PAPSS1O43252 624 aaPredicted RBP11.78□□□□□ -0.52
CLPX-204ENST00000559152 BRAFP15056 766 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 ATP2A2P16615 1042 aaKnown RBP11.78□□□□□ -0.52
CLPX-204ENST00000559152 DRD4P21917 467 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 RPL22P35268 128 aaKnown RBP11.78□□□□□ -0.52
CLPX-204ENST00000559152 PURAQ00577 322 aaKnown RBP11.78□□□□□ -0.52
CLPX-204ENST00000559152 PDIA2Q13087 525 aaKnown RBP11.78□□□□□ -0.52
CLPX-204ENST00000559152 CDO1Q16878 200 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 C15orf59Q2T9L4 293 aaPredicted RBP11.78□□□□□ -0.52
CLPX-204ENST00000559152 DARS2Q6PI48 645 aaKnown RBP11.78□□□□□ -0.52
CLPX-204ENST00000559152 LIMS2Q7Z4I7 341 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 ZBED8Q8IZ13 594 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 PDIK1LQ8N165 341 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 SEC16BQ96JE7 1060 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 ZNF317Q96PQ6 595 aaPredicted RBP11.78□□□□□ -0.52
CLPX-204ENST00000559152 FRMD8Q9BZ67 464 aaPredicted RBP11.78□□□□□ -0.52
CLPX-204ENST00000559152 CXCL16Q9H2A7 254 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 PRDM16Q9HAZ2 1276 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 SLC38A7Q9NVC3 462 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 NKIRAS1Q9NYS0 192 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 DDX20Q9UHI6 824 aaKnown RBP11.78□□□□□ -0.52
CLPX-204ENST00000559152 IPPQ9Y573 584 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 TMEM120BA0PK00 339 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 PIK3R2O00459 728 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 APOL1O14791 398 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 DUSP11O75319 330 aaKnown RBP11.78□□□□□ -0.52
CLPX-204ENST00000559152 GRAP2O75791 330 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 IGHA2P01877 340 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 WARSP23381 471 aaKnown RBP11.78□□□□□ -0.52
CLPX-204ENST00000559152 LRPAP1P30533 357 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 ATP11AP98196 1134 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 HIC1Q14526 733 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 TAF5Q15542 800 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 CCL14Q16627 93 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 CCDC38Q502W7 563 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 EFHC1Q5JVL4 640 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 TWF2Q6IBS0 349 aaKnown RBP11.78□□□□□ -0.52
CLPX-204ENST00000559152 TRNP1Q6NT89 227 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 CYP4V2Q6ZWL3 525 aaPredicted RBP11.78□□□□□ -0.52
CLPX-204ENST00000559152 IFNL1Q8IU54 200 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 CCDC13Q8IYE1 715 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 ATP11CQ8NB49 1132 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 PYROXD1Q8WU10 500 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 KBTBD7Q8WVZ9 684 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 CPT1BQ92523 772 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 PRMT1Q99873 361 aaKnown RBP11.78□□□□□ -0.52
CLPX-204ENST00000559152 RASSF4Q9H2L5 321 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 VPS37BQ9H9H4 285 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 KCNK9Q9NPC2 374 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 PAK5Q9P286 719 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 GJD2Q9UKL4 321 aa11.78□□□□□ -0.52
CLPX-204ENST00000559152 GOLGA6L7A0A1B0GV03 622 aa11.77□□□□□ -0.53
CLPX-204ENST00000559152 ITGBL1O95965 494 aaPredicted RBP11.77□□□□□ -0.53
CLPX-204ENST00000559152 SLC18A1P54219 525 aa11.77□□□□□ -0.53
CLPX-204ENST00000559152 GDF10P55107 478 aa11.77□□□□□ -0.53
CLPX-204ENST00000559152 BCAR1P56945 870 aa11.77□□□□□ -0.53
CLPX-204ENST00000559152 BEX3Q00994 111 aa11.77□□□□□ -0.53
CLPX-204ENST00000559152 ANKRD20A8PQ5CZ79 823 aa11.77□□□□□ -0.53
CLPX-204ENST00000559152 SH3PXD2AQ5TCZ1 1133 aa11.77□□□□□ -0.53
CLPX-204ENST00000559152 RGMBQ6NW40 437 aa11.77□□□□□ -0.53
CLPX-204ENST00000559152 C6orf89Q6UWU4 347 aa11.77□□□□□ -0.53
CLPX-204ENST00000559152 UNC45BQ8IWX7 931 aa11.77□□□□□ -0.53
CLPX-204ENST00000559152 ADGRF2Q8IZF7 708 aa11.77□□□□□ -0.53
CLPX-204ENST00000559152 FAM71DQ8N9W8 422 aa11.77□□□□□ -0.53
CLPX-204ENST00000559152 CENPIQ92674 756 aaPredicted RBP11.77□□□□□ -0.53
CLPX-204ENST00000559152 KHSRPQ92945 711 aaKnown RBP eCLIP11.77□□□□□ -0.532e-8■■■■□ 19.6
CLPX-204ENST00000559152 MTG1Q9BT17 334 aaPredicted RBP11.77□□□□□ -0.53
CLPX-204ENST00000559152 GPBP1L1Q9HC44 474 aaPredicted RBP11.77□□□□□ -0.53
CLPX-204ENST00000559152 CHST12Q9NRB3 414 aa11.77□□□□□ -0.53
CLPX-204ENST00000559152 EURLQ9NYK6 297 aa11.77□□□□□ -0.53
CLPX-204ENST00000559152 KLK14Q9P0G3 267 aa11.77□□□□□ -0.53
CLPX-204ENST00000559152 SAMD15Q9P1V8 674 aa11.77□□□□□ -0.53
CLPX-204ENST00000559152 CEP350Q5VT06 3117 aa11.77□□□□□ -0.53
CLPX-204ENST00000559152 E7ESA3 106 aa11.76□□□□□ -0.53
CLPX-204ENST00000559152 H7C0C1 242 aa11.76□□□□□ -0.53
CLPX-204ENST00000559152 XPO1O14980 1071 aaKnown RBP11.76□□□□□ -0.53
CLPX-204ENST00000559152 PDGFRBP09619 1106 aa11.76□□□□□ -0.53
CLPX-204ENST00000559152 ATP5OP48047 213 aa11.76□□□□□ -0.53
CLPX-204ENST00000559152 LILRA4P59901 499 aa11.76□□□□□ -0.53
CLPX-204ENST00000559152 RNASELQ05823 741 aaKnown RBP11.76□□□□□ -0.53
CLPX-204ENST00000559152 CBLBQ13191 982 aa11.76□□□□□ -0.53
CLPX-204ENST00000559152 KLHL38Q2WGJ6 581 aa11.76□□□□□ -0.53
CLPX-204ENST00000559152 SLC9A4Q6AI14 798 aa11.76□□□□□ -0.53
CLPX-204ENST00000559152 STRADAQ7RTN6 431 aa11.76□□□□□ -0.53
CLPX-204ENST00000559152 C10orf67Q8IYJ2 551 aa11.76□□□□□ -0.53
CLPX-204ENST00000559152 PLD5Q8N7P1 536 aa11.76□□□□□ -0.53
CLPX-204ENST00000559152 CCDC197Q8NCU1 140 aa11.76□□□□□ -0.53
CLPX-204ENST00000559152 SMG8Q8ND04 991 aaKnown RBP11.76□□□□□ -0.53
CLPX-204ENST00000559152 LENG1Q96BZ8 264 aaPredicted RBP11.76□□□□□ -0.53
CLPX-204ENST00000559152 FAF2Q96CS3 445 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms