RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 TEX19Q8NA77 164 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 Q8NA96 180 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 NSUN7Q8NE18 718 aaKnown RBP5.13□□□□□ -1.59
CASC4-206ENST00000558847 MBD3L2Q8NHZ7 208 aaPredicted RBP5.13□□□□□ -1.59
CASC4-206ENST00000558847 WDR60Q8WVS4 1066 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 RUBCNQ92622 972 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 LENG9Q96B70 501 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 EVI5LQ96CN4 794 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 GRAMD1AQ96CP6 724 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 RNF31Q96EP0 1072 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 ZSWIM1Q9BR11 485 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 NUDT22Q9BRQ3 303 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 FAM167BQ9BTA0 163 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 TTPALQ9BTX7 342 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 INO80BQ9C086 356 aaPredicted RBP5.13□□□□□ -1.59
CASC4-206ENST00000558847 MAF1Q9H063 256 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 TP63Q9H3D4 680 aaPredicted RBP5.13□□□□□ -1.59
CASC4-206ENST00000558847 CXorf36Q9H7Y0 433 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 INTS13Q9NVM9 706 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 MRPS18AQ9NVS2 196 aaKnown RBP5.13□□□□□ -1.59
CASC4-206ENST00000558847 IGSF9Q9P2J2 1179 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 NFU1Q9UMS0 254 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 PCDHGB3Q9Y5G1 929 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 LRRFIP2Q9Y608 721 aaKnown RBP5.13□□□□□ -1.59
CASC4-206ENST00000558847 AATKQ6ZMQ8 1374 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 TRGV11A0A075B6L2 103 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 AQP12BA6NM10 295 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 TRIM38O00635 465 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 ASNA1O43681 348 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 NTSR2O95665 410 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 CD19P15391 556 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 VEGFAP15692 232 aaPredicted RBP5.12□□□□□ -1.59
CASC4-206ENST00000558847 DDIT3P35638 169 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 BMPR1AP36894 532 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 MAPK9P45984 424 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 VAV2P52735 878 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 EFR3AQ14156 821 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 POSTNQ15063 836 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 CYP2A13Q16696 494 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 ANKRD45Q5TZF3 282 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 MANEALQ5VSG8 457 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 RGS7BPQ6MZT1 257 aaPredicted RBP5.12□□□□□ -1.59
CASC4-206ENST00000558847 USP49Q70CQ1 688 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 ZNF280BQ86YH2 543 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 RAB11FIP4Q86YS3 637 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 DNAJB14Q8TBM8 379 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 STYXQ8WUJ0 223 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 OSCP1Q8WVF1 389 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 USP13Q92995 863 aaPredicted RBP5.12□□□□□ -1.59
CASC4-206ENST00000558847 TMEM125Q96AQ2 219 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 FAM136AQ96C01 138 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 LRIG1Q96JA1 1093 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 PRRX2Q99811 253 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 SMOC2Q9H3U7 446 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 AKIP1Q9NQ31 210 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 TRIM36Q9NQ86 728 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 DKK2Q9UBU2 259 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 DMRT1Q9Y5R6 373 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 HS3ST4Q9Y661 456 aa5.12□□□□□ -1.59
CASC4-206ENST00000558847 CCDC78A2IDD5 438 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 NCR1O76036 304 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 CDKL5O76039 1030 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 SRGAP2BP0DMP2 458 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 PECAM1P16284 738 aaPredicted RBP5.11□□□□□ -1.59
CASC4-206ENST00000558847 DDX6P26196 483 aaKnown RBP eCLIP5.11□□□□□ -1.59
CASC4-206ENST00000558847 RBL1P28749 1068 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 PAPOLAP51003 745 aaKnown RBP5.11□□□□□ -1.59
CASC4-206ENST00000558847 PGDP52209 483 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 MC2RQ01718 297 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 ITIH3Q06033 890 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 KCNAB1Q14722 419 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 CLCA4Q14CN2 919 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 BEAN1Q3B7T3 259 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 ZIK1Q3SY52 487 aaPredicted RBP5.11□□□□□ -1.59
CASC4-206ENST00000558847 ARHGAP15Q53QZ3 475 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 FBXO47Q5MNV8 452 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 TMTC4Q5T4D3 741 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 B3GNTL1Q67FW5 361 aaPredicted RBP5.11□□□□□ -1.59
CASC4-206ENST00000558847 RAP1GAP2Q684P5 730 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 CYP26C1Q6V0L0 522 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 Q6ZPA2 131 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 RAB11FIP2Q7L804 512 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 MRGPREQ86SM8 312 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 FAM109AQ8N4B1 249 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 STT3BQ8TCJ2 826 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 SPPL3Q8TCT6 385 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 OTUD7AQ8TE49 926 aaPredicted RBP5.11□□□□□ -1.59
CASC4-206ENST00000558847 ATRIPQ8WXE1 791 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 SDCCAG3Q96C92 435 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 HIST1H2AAQ96QV6 131 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 AGAP2Q99490 1192 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 RTKNQ9BST9 563 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 MLST8Q9BVC4 326 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 SORBS1Q9BX66 1292 aaKnown RBP5.11□□□□□ -1.59
CASC4-206ENST00000558847 ALOXE3Q9BYJ1 711 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 NRDE2Q9H7Z3 1164 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 SEPSECSQ9HD40 501 aaKnown RBP5.11□□□□□ -1.59
CASC4-206ENST00000558847 KIF17Q9P2E2 1029 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 USP22Q9UPT9 525 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms