RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 HERPUD2Q9BSE4 406 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 SLC17A7Q9P2U7 560 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 FNDC3AQ9Y2H6 1198 aaKnown RBP16.07■□□□□ 0.16
AP4E1-202ENST00000558439 MRPL42Q9Y6G3 142 aaKnown RBP16.07■□□□□ 0.16
AP4E1-202ENST00000558439 NFASCO94856 1347 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 MYH7BA7E2Y1 1941 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 ENO4A6NNW6 628 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 APOC4-APOC2K7ER74 178 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 IRF6O14896 467 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 GAS2O43903 313 aaKnown RBP16.07■□□□□ 0.16
AP4E1-202ENST00000558439 APOC2P02655 101 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 GNL1P36915 607 aaPredicted RBP16.07■□□□□ 0.16
AP4E1-202ENST00000558439 CRADDP78560 199 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 FSTL1Q12841 308 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 CES3Q6UWW8 571 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 PIGWQ7Z7B1 504 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 DNAJC9Q8WXX5 260 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 TMEM109Q9BVC6 243 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 ASCC2Q9H1I8 757 aaPredicted RBP16.07■□□□□ 0.16
AP4E1-202ENST00000558439 DRG1Q9Y295 367 aaKnown RBP16.07■□□□□ 0.16
AP4E1-202ENST00000558439 DOCK2Q92608 1830 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 ALOX15BO15296 676 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 ONECUT3O60422 494 aaPredicted RBP16.06■□□□□ 0.16
AP4E1-202ENST00000558439 UNC5CO95185 931 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 SLC25A27O95847 323 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 SRGAP2BP0DMP2 458 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 SERPINB4P48594 390 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 ATXN3P54252 364 aaPredicted RBP16.06■□□□□ 0.16
AP4E1-202ENST00000558439 AQP5P55064 265 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 MMEL1Q495T6 779 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 ZC3H12AQ5D1E8 599 aaKnown RBP16.06■□□□□ 0.16
AP4E1-202ENST00000558439 CHADLQ6NUI6 762 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.06■□□□□ 0.16
AP4E1-202ENST00000558439 ZNF526Q8TF50 670 aaPredicted RBP16.06■□□□□ 0.16
AP4E1-202ENST00000558439 CD101Q93033 1021 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 SLC5A4Q9NY91 659 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 SNTG2Q9NY99 539 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 LRCH4O75427 683 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 FARP2O94887 1054 aaPredicted RBP16.06■□□□□ 0.16
AP4E1-202ENST00000558439 ZFXP17010 805 aaPredicted RBP16.06■□□□□ 0.16
AP4E1-202ENST00000558439 FOXN2P32314 431 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 PREPLQ4J6C6 727 aaPredicted RBP16.06■□□□□ 0.16
AP4E1-202ENST00000558439 C6orf89Q6UWU4 347 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 SRPK1Q96SB4 655 aaKnown RBP16.06■□□□□ 0.16
AP4E1-202ENST00000558439 AP5M1Q9H0R1 490 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 C5orf60A6NFR6 353 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 ENTPD5O75356 428 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 RASSF9O75901 435 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 RNF135Q8IUD6 432 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 TTC39CQ8N584 583 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 APPL2Q8NEU8 664 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 SEC14L1Q92503 715 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 FBXL18Q96ME1 805 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 BARX2Q9UMQ3 279 aaPredicted RBP16.06■□□□□ 0.16
AP4E1-202ENST00000558439 C15orf41Q9Y2V0 281 aa16.06■□□□□ 0.16
AP4E1-202ENST00000558439 NVLO15381 856 aaKnown RBP16.05■□□□□ 0.16
AP4E1-202ENST00000558439 CRCPO75575 148 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 SPAG6O75602 509 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 SLC4A1P02730 911 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 MX2P20592 715 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 AMPD1P23109 780 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 AKAP5P24588 427 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 LACTB2Q53H82 288 aaPredicted RBP16.05■□□□□ 0.16
AP4E1-202ENST00000558439 LRRC38Q5VT99 294 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 OTOAQ7RTW8 1153 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 TBC1D10AQ9BXI6 508 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 MOCS2O96007 188 aaPredicted RBP16.05■□□□□ 0.16
AP4E1-202ENST00000558439 CYP2F1P24903 491 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 CDKN2BP42772 138 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 NUMBP49757 651 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 GDF10P55107 478 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 RPL10AP62906 217 aaKnown RBP16.05■□□□□ 0.16
AP4E1-202ENST00000558439 RASA2Q15283 850 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 BBS12Q6ZW61 710 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 RYBPQ8N488 228 aaPredicted RBP16.05■□□□□ 0.16
AP4E1-202ENST00000558439 PDGFCQ9NRA1 345 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 C2orf71A6NGG8 1288 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 ITGAVP06756 1048 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 WDR4P57081 412 aaKnown RBP16.05■□□□□ 0.16
AP4E1-202ENST00000558439 GAD2Q05329 585 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 POU5F1BQ06416 359 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 CUL3Q13618 768 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 PDK4Q16654 411 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 ARL13BQ3SXY8 428 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 FNBP1LQ5T0N5 605 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 KIAA0319LQ8IZA0 1049 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 SLC7A14Q8TBB6 771 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 ZNF669Q96BR6 464 aaPredicted RBP16.05■□□□□ 0.16
AP4E1-202ENST00000558439 MTBPQ96DY7 904 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 GMLQ99445 158 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 OSMRQ99650 979 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 FBXO6Q9NRD1 293 aaPredicted RBP16.05■□□□□ 0.16
AP4E1-202ENST00000558439 SETD4Q9NVD3 440 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 AP4E1Q9UPM8 1137 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 RPS6KL1Q9Y6S9 549 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 GSTA2P09210 222 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 PTPN4P29074 926 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 WNT7BP56706 349 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 MPP2Q14168 576 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 RABGAP1LQ5R372 815 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms