RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 PDE6CP51160 858 aa17.68■□□□□ 0.42
NEK9-211ENST00000557673 AP3M2P53677 418 aa17.68■□□□□ 0.42
NEK9-211ENST00000557673 DDR2Q16832 855 aa17.68■□□□□ 0.42
NEK9-211ENST00000557673 TDRD10Q5VZ19 366 aaKnown RBP17.68■□□□□ 0.42
NEK9-211ENST00000557673 LIMS2Q7Z4I7 341 aa17.68■□□□□ 0.42
NEK9-211ENST00000557673 FILIP1Q7Z7B0 1213 aa17.68■□□□□ 0.42
NEK9-211ENST00000557673 STKLD1Q8NE28 680 aa17.68■□□□□ 0.42
NEK9-211ENST00000557673 FUBP3Q96I24 572 aaKnown RBP eCLIP17.68■□□□□ 0.42
NEK9-211ENST00000557673 FUCA2Q9BTY2 467 aa17.68■□□□□ 0.42
NEK9-211ENST00000557673 DUSP15Q9H1R2 295 aaPredicted RBP17.68■□□□□ 0.42
NEK9-211ENST00000557673 FBRSL1Q9HCM7 1045 aaKnown RBP17.68■□□□□ 0.42
NEK9-211ENST00000557673 TRPC7Q9HCX4 862 aa17.68■□□□□ 0.42
NEK9-211ENST00000557673 RXFP3Q9NSD7 469 aa17.68■□□□□ 0.42
NEK9-211ENST00000557673 ARMCX3Q9UH62 379 aaPredicted RBP17.68■□□□□ 0.42
NEK9-211ENST00000557673 GTF3C4Q9UKN8 822 aa17.68■□□□□ 0.42
NEK9-211ENST00000557673 ZFHX4Q86UP3 3567 aa17.68■□□□□ 0.42
NEK9-211ENST00000557673 KIF26AQ9ULI4 1882 aaPredicted RBP17.67■□□□□ 0.42
NEK9-211ENST00000557673 USP24Q9UPU5 2620 aa17.67■□□□□ 0.42
NEK9-211ENST00000557673 SYCE3A1L190 88 aa17.67■□□□□ 0.42
NEK9-211ENST00000557673 IKBKBO14920 756 aa17.67■□□□□ 0.42
NEK9-211ENST00000557673 ATP2C2O75185 946 aa17.67■□□□□ 0.42
NEK9-211ENST00000557673 KCNK5O95279 499 aa17.67■□□□□ 0.42
NEK9-211ENST00000557673 CAVIN2O95810 425 aa17.67■□□□□ 0.42
NEK9-211ENST00000557673 CYP2F1P24903 491 aa17.67■□□□□ 0.42
NEK9-211ENST00000557673 MARSP56192 900 aaKnown RBP17.67■□□□□ 0.42
NEK9-211ENST00000557673 PSMC1P62191 440 aaKnown RBP17.67■□□□□ 0.42
NEK9-211ENST00000557673 DMC1Q14565 340 aa17.67■□□□□ 0.42
NEK9-211ENST00000557673 ZACNQ401N2 412 aa17.67■□□□□ 0.42
NEK9-211ENST00000557673 CFAP221Q4G0U5 840 aa17.67■□□□□ 0.42
NEK9-211ENST00000557673 CCDC40Q4G0X9 1142 aa17.67■□□□□ 0.42
NEK9-211ENST00000557673 DCAF17Q5H9S7 520 aaPredicted RBP17.67■□□□□ 0.42
NEK9-211ENST00000557673 SDHAF4Q5VUM1 108 aa17.67■□□□□ 0.42
NEK9-211ENST00000557673 SPATA2LQ8IUW3 424 aaPredicted RBP17.67■□□□□ 0.42
NEK9-211ENST00000557673 SRRTQ9BXP5 876 aaKnown RBP17.67■□□□□ 0.42
NEK9-211ENST00000557673 METTL14Q9HCE5 456 aaKnown RBP17.67■□□□□ 0.42
NEK9-211ENST00000557673 BCLAF3A2AJT9 711 aaKnown RBP17.66■□□□□ 0.42
NEK9-211ENST00000557673 LETM1O95202 739 aaPredicted RBP17.66■□□□□ 0.42
NEK9-211ENST00000557673 FGFR1OPO95684 399 aaKnown RBP17.66■□□□□ 0.42
NEK9-211ENST00000557673 GNA14O95837 355 aa17.66■□□□□ 0.42
NEK9-211ENST00000557673 LMO2P25791 158 aa17.66■□□□□ 0.42
NEK9-211ENST00000557673 MYL6P60660 151 aa17.66■□□□□ 0.42
NEK9-211ENST00000557673 CREB5Q02930 508 aa17.66■□□□□ 0.42
NEK9-211ENST00000557673 PPP3CAQ08209 521 aa17.66■□□□□ 0.42
NEK9-211ENST00000557673 BIRC3Q13489 604 aa17.66■□□□□ 0.42
NEK9-211ENST00000557673 ZNF77Q15935 545 aa17.66■□□□□ 0.42
NEK9-211ENST00000557673 ZSCAN23Q3MJ62 389 aa17.66■□□□□ 0.42
NEK9-211ENST00000557673 USP39Q53GS9 565 aaKnown RBP17.66■□□□□ 0.42
NEK9-211ENST00000557673 DAB2IPQ5VWQ8 1189 aa17.66■□□□□ 0.42
NEK9-211ENST00000557673 DPH6Q7L8W6 267 aa17.66■□□□□ 0.42
NEK9-211ENST00000557673 TTC16Q8NEE8 873 aa17.66■□□□□ 0.42
NEK9-211ENST00000557673 SLC35C1Q96A29 364 aa17.66■□□□□ 0.42
NEK9-211ENST00000557673 CNOT6LQ96LI5 555 aaKnown RBP17.66■□□□□ 0.42
NEK9-211ENST00000557673 CEP295NLQ96MC4 621 aa17.66■□□□□ 0.42
NEK9-211ENST00000557673 MMS19Q96T76 1030 aa17.66■□□□□ 0.42
NEK9-211ENST00000557673 SYT15Q9BQS2 421 aa17.66■□□□□ 0.42
NEK9-211ENST00000557673 MRPL45Q9BRJ2 306 aaKnown RBP17.66■□□□□ 0.42
NEK9-211ENST00000557673 PHACTR2O75167 634 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 VNN1O95497 513 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 NFATC1O95644 943 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 C4BPAP04003 597 aaKnown RBP17.65■□□□□ 0.42
NEK9-211ENST00000557673 PFKLP17858 780 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 WARSP23381 471 aaKnown RBP17.65■□□□□ 0.42
NEK9-211ENST00000557673 GBP1P32455 592 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 GTF2H1P32780 548 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 GCLMP48507 274 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 MXI1P50539 228 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 DGKEP52429 567 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 USP4Q13107 963 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 TRPC3Q13507 836 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 EML3Q32P44 896 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 WDR72Q3MJ13 1102 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 C4orf50Q6ZRC1 276 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 SV2AQ7L0J3 742 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 IRF2BP1Q8IU81 584 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 TRIM59Q8IWR1 403 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 TSTD1Q8NFU3 115 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 RIN3Q8TB24 985 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 MYLPFQ96A32 169 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 CYP2S1Q96SQ9 504 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 EDEM2Q9BV94 578 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 XYLT2Q9H1B5 865 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 SMOC1Q9H4F8 434 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 THAP9Q9H5L6 903 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 TMEM8AQ9HCN3 771 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 CRTAC1Q9NQ79 661 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 EHD2Q9NZN4 543 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 NME7Q9Y5B8 376 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 WNT6Q9Y6F9 365 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 ZNF638Q14966 1978 aaKnown RBP17.65■□□□□ 0.42
NEK9-211ENST00000557673 OBSL1O75147 1896 aa17.65■□□□□ 0.42
NEK9-211ENST00000557673 STX10O60499 249 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 TADA3O75528 432 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 STAU1O95793 577 aaKnown RBP17.64■□□□□ 0.41
NEK9-211ENST00000557673 PDGFRBP09619 1106 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 TCF3P15923 654 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 HDCP19113 662 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 PIK3CAP42336 1068 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 MAGEA11P43364 429 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 TNNC1P63316 161 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 NCOA4Q13772 614 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms